FFCP PHASE1:Hg19::chr17:4843528..4843548,+: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=26001 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=24544 | |||
|TSSclassifier=strong | |||
|UniProt=Q9H6Y7 | |||
|association_with_transcript=-81bp_to_NM_015528,uc002fzs.2_5end | |||
|description=CAGE_peak_7_at_RNF167_5end | |||
|id=chr17:4843528..4843548,+ | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0007023!1.12e-21!115;UBERON:0001049!2.32e-13!57;UBERON:0005068!2.32e-13!57;UBERON:0006241!2.32e-13!57;UBERON:0007135!2.32e-13!57;UBERON:0002616!3.15e-12!59;UBERON:0005743!1.82e-11!86;UBERON:0001017!3.72e-11!82;UBERON:0000955!4.30e-10!69;UBERON:0006238!4.30e-10!69;UBERON:0003075!1.55e-09!86;UBERON:0007284!1.55e-09!86;UBERON:0000073!2.21e-09!94;UBERON:0001016!2.21e-09!94;UBERON:0003080!2.52e-09!42;UBERON:0002780!6.12e-09!41;UBERON:0001890!6.12e-09!41;UBERON:0006240!6.12e-09!41;UBERON:0002346!1.09e-08!90;UBERON:0001893!1.19e-08!34;UBERON:0002791!3.18e-08!33;UBERON:0002020!4.49e-08!34;UBERON:0003528!4.49e-08!34;UBERON:0001869!1.03e-07!32;UBERON:0002619!3.35e-07!22;UBERON:0003056!3.51e-07!61;UBERON:0001737!4.34e-07!9;UBERON:0000956!9.39e-07!25;UBERON:0000203!9.39e-07!25 | |||
|ontology_enrichment_uberon_v019=UBERON:0000073;3.85e-08;53!UBERON:0002616;3.85e-08;53!UBERON:0001893;4.94e-08;34!UBERON:0001737;1.11e-07;9!UBERON:0001557;1.11e-07;9!UBERON:0002791;2.57e-07;32!UBERON:0001869;2.59e-07;32!UBERON:0002780;3.21e-07;41!UBERON:0001890;3.21e-07;41!UBERON:0003528;3.48e-07;34!UBERON:0002020;3.48e-07;34!UBERON:0002619;4.58e-07;22 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0007023,1.12e-22,114;UBERON:0001049,5.93e-14,56;UBERON:0005068,5.93e-14,56;UBERON:0006241,5.93e-14,56;UBERON:0007135,5.93e-14,56;UBERON:0000073,6.28e-13,53;UBERON:0002616,6.28e-13,53;UBERON:0001017,1.61e-11,81;UBERON:0000955,1.11e-10,68;UBERON:0006238,1.11e-10,68;UBERON:0003075,1.06e-09,82;UBERON:0007284,1.06e-09,82;UBERON:0002780,1.13e-09,41;UBERON:0001890,1.13e-09,41;UBERON:0003080,1.13e-09,41;UBERON:0006240,1.13e-09,41;UBERON:0001016,1.98e-09,89;UBERON:0001893,2.07e-09,34;UBERON:0002346,8.49e-09,86;UBERON:0003528,8.68e-09,34;UBERON:0002020,8.68e-09,34;UBERON:0002791,1.95e-08,32;UBERON:0001869,2.09e-08,32;UBERON:0002619,8.04e-08,22;UBERON:0001737,1.99e-07,9;UBERON:0000956,3.77e-07,25;UBERON:0000203,3.77e-07,25;UBERON:0001950,4.70e-07,20 | |||
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| |||
|short_description=p7@RNF167 | |||
}} |
Revision as of 13:16, 20 January 2014
Short description: | p7@RNF167 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_7_at_RNF167_5end |
Coexpression cluster: | NA |
Association with transcript: | -81bp_to_NM_015528, uc002fzs.2_5end |
EntrezGene: | RNF167 |
HGNC: | 24544 |
UniProt: | Q9H6Y7 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
adult organism | 1.12e-22 | 114 |
neural tube | 5.93e-14 | 56 |
neural rod | 5.93e-14 | 56 |
future spinal cord | 5.93e-14 | 56 |
neural keel | 5.93e-14 | 56 |
regional part of nervous system | 6.28e-13 | 53 |
regional part of brain | 6.28e-13 | 53 |
central nervous system | 1.61e-11 | 81 |
brain | 1.11e-10 | 68 |
future brain | 1.11e-10 | 68 |
neural plate | 1.06e-09 | 82 |
presumptive neural plate | 1.06e-09 | 82 |
regional part of forebrain | 1.13e-09 | 41 |
forebrain | 1.13e-09 | 41 |
anterior neural tube | 1.13e-09 | 41 |
future forebrain | 1.13e-09 | 41 |
nervous system | 1.98e-09 | 89 |
telencephalon | 2.07e-09 | 34 |
neurectoderm | 8.49e-09 | 86 |
brain grey matter | 8.68e-09 | 34 |
gray matter | 8.68e-09 | 34 |
regional part of telencephalon | 1.95e-08 | 32 |
cerebral hemisphere | 2.09e-08 | 32 |
regional part of cerebral cortex | 8.04e-08 | 22 |
larynx | 1.99e-07 | 9 |
cerebral cortex | 3.77e-07 | 25 |
pallium | 3.77e-07 | 25 |
neocortex | 4.70e-07 | 20 |