FFCP PHASE1:Hg19::chr17:4835544..4835553,+: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=2811 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=4439 | |||
|TSSclassifier=strong | |||
|UniProt=E7ES66 | |||
|association_with_transcript=-38bp_to_ENST00000329125,NM_000173,uc010vsq.1_5end | |||
|description=CAGE_peak_3_at_GP1BA_5end | |||
|id=chr17:4835544..4835553,+ | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_development_v019=UBERON:0001045;1.57e-12;1!UBERON:0004872;2.82e-07;7!UBERON:0006965;5.41e-07;2 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019=DOID:9119;1.57e-12;1 | |||
|ontology_enrichment_disease_v019_2=DOID:9119,1.57e-12,1 | |||
|ontology_enrichment_uberon=UBERON:0000178!2.14e-27!15;UBERON:0000179!2.14e-27!15;UBERON:0000463!2.14e-27!15;UBERON:0007023!8.12e-17!115;UBERON:0002193!5.09e-12!112;UBERON:0002390!7.29e-10!102;UBERON:0003061!7.29e-10!102;UBERON:0003408!1.24e-08!10;UBERON:0004177!2.95e-08!7;UBERON:0001829!3.54e-08!2 | |||
|ontology_enrichment_uberon_v019=UBERON:0000178;2.44e-35;15!UBERON:0000179;2.44e-35;15!UBERON:0000463;2.44e-35;15!UBERON:0002390;4.75e-20;32!UBERON:0002193;2.13e-18;42!UBERON:0000029;9.92e-13;1!UBERON:0002372;1.57e-12;1!UBERON:0001154;1.57e-12;1!UBERON:0001153;1.57e-12;1!UBERON:0009854;1.57e-12;1!UBERON:0001961;1.57e-12;1!UBERON:0001744;1.57e-12;1!UBERON:0001042;1.57e-12;1!UBERON:0001735;1.57e-12;1!UBERON:0006562;6.80e-07;2 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000178,1.74e-35,15;UBERON:0000179,1.74e-35,15;UBERON:0000463,1.74e-35,15;UBERON:0000029,8.85e-13,1;UBERON:0001154,1.25e-12,1;UBERON:0001153,1.25e-12,1;UBERON:0001045,1.25e-12,1;UBERON:0002372,1.96e-12,1;UBERON:0001961,1.96e-12,1;UBERON:0001744,1.96e-12,1;UBERON:0001735,1.96e-12,1;UBERON:0007023,2.62e-10,114;UBERON:0002193,7.71e-09,108 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.393364276848904,0,0,0,0,0,0,0,0.293600439334847,0,0,0.217010870715852,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.272906150057846,0,0,0,0,0,0,0,0,0,0,0.251248665256743,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.236777252044017,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.174129737299267,0.797747763113191,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.718618141816238,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.215714200818617,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.52234282769651,0.764637207142375,1.13929437434833,0.952927101831156,1.64544909234478,3.24236655596359,2.70015718619057,1.58625035258854,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.23087398947712,1.08182271390393,2.66457574398256,4.22961015263549,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.76283915531148,0,0,0.123084805461069,0,0,0,0,0.197286811273867,4.7896618469388,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.332423363800313,0,0,0,0,0.476809736941136,0,0,0,0,0,0.0884575645033392,0,0.296521128680622,0,0,0,0,0,0,0,0,0,2.41981432097328,0,0,0.150323419414493,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.387956065953678,0,0,0,0,0.0633107959558787,0,0,0,0,0,0,0,0,0,0,0.135904206073614,0.313808538937,0,0,0,0,0,0,0,0,0,0,0,0,0.223171457441873,0.0671834724867263,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0788057072991982,0,0,0,0,0,0,0,0,0,0,0,0.246277562248017,0,0,0,0,0,0,0,0,0.106787412567695,0.471612915298998,0,3.96932817449561,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.428883182749851,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.548257766857182,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.078493092850514,0,0,0,0,0,0.0714765441766563,0,0,0,0,0,0,0,0.860454717640555,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.218559560503957,0,0,0,0,0,0,0,0.657887425858975,1.16024198352439,0,0,0,0,0,0.917458566809082,0,0,0,0,1.0580536810308,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.23806443146374,0.258355639344024,0.434523000071005,0,0,0,0,0,2.1552656964668,0.430333232356058,0,0,0,0,0,0,0,0,0,3.62292828463847,0 | |||
|short_description=p3@GP1BA | |||
}} |
Revision as of 13:15, 20 January 2014
Short description: | p3@GP1BA |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_3_at_GP1BA_5end |
Coexpression cluster: | NA |
Association with transcript: | -38bp_to_ENST00000329125, NM_000173, uc010vsq.1_5end |
EntrezGene: | GP1BA |
HGNC: | 4439 |
UniProt: | E7ES66 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
blood | 1.74e-35 | 15 |
haemolymphatic fluid | 1.74e-35 | 15 |
organism substance | 1.74e-35 | 15 |
lymph node | 8.85e-13 | 1 |
vermiform appendix | 1.25e-12 | 1 |
caecum | 1.25e-12 | 1 |
midgut | 1.25e-12 | 1 |
tonsil | 1.96e-12 | 1 |
mucosa-associated lymphoid tissue | 1.96e-12 | 1 |
lymphoid tissue | 1.96e-12 | 1 |
tonsillar ring | 1.96e-12 | 1 |
adult organism | 2.62e-10 | 114 |
hemolymphoid system | 7.71e-09 | 108 |
Ontology term | p-value | n |
---|---|---|
acute myeloid leukemia | 1.57e-12 | 1 |