FFCP PHASE1:Hg19::chr17:47039007..47039034,-: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
Line 1: | Line 1: | ||
{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport= | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |||
|TSSclassifier=not | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|description=CAGE_peak_at_chr17:47039007..47039034,- | |||
|id=chr17:47039007..47039034,- | |||
|ontology_enrichment_celltype=CL:0000055!2.78e-19!180;CL:0000548!2.41e-11!679;CL:0000004!2.41e-11!679;CL:0000255!2.41e-11!679;CL:0000012!4.29e-11!682;CL:0000680!2.00e-09!57;CL:0000056!2.00e-09!57;CL:0000355!2.00e-09!57;CL:0000183!5.27e-09!59;CL:0000144!9.04e-09!625;CL:0002321!1.65e-08!248;CL:0000220!2.38e-08!246;CL:0000003!5.89e-08!722;CL:0000187!1.02e-07!54;CL:0000393!1.28e-07!60;CL:0000211!1.28e-07!60;CL:0002620!3.43e-07!23 | |||
|ontology_enrichment_celltype_v019=CL:0002591;3.28e-11;1!CL:0000243;7.33e-10;15!CL:0000125;7.33e-10;15!CL:0000095;7.69e-09;17!CL:0002149;1.19e-07;6!CL:0002255;1.19e-07;6 | |||
|ontology_enrichment_celltype_v019_2=CL:0002591,4.44e-11,1;CL:0000243,7.25e-10,15;CL:0000125,7.25e-10,15;CL:0000030,7.25e-10,15;CL:0000339,7.25e-10,15;CL:0000095,7.62e-09,17;CL:0000123,7.62e-09,17;CL:0002149,1.02e-07,6;CL:0002255,1.02e-07,6 | |||
|ontology_enrichment_development_v019=CL:0000339;7.33e-10;15!UBERON:0006238;4.72e-09;10 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019=DOID:3093;2.45e-08;11!DOID:3001;1.19e-07;6 | |||
|ontology_enrichment_disease_v019_2=DOID:3093,2.42e-08,11;DOID:3001,1.02e-07,6 | |||
|ontology_enrichment_uberon=UBERON:0001134!2.75e-08!61;UBERON:0002036!2.75e-08!61;UBERON:0003082!2.75e-08!61;UBERON:0005256!8.15e-08!143;UBERON:0002385!8.82e-08!63;UBERON:0001015!8.82e-08!63;UBERON:0000383!8.82e-08!63;UBERON:0004290!1.57e-07!70 | |||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2= | |||
|phase1_expression=0.181678379270557,0,0,0,0,0,0,0,0,0,0.697801167972428,0.436882744260345,0.527533956456907,0.618831764800233,1.65698687863958,1.34465029290355,0,0,0.487932798790507,0.492484232307152,0.204000691244253,0,0,0.410623275218653,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.50133791063589,0.144846518960824,0.795285947051099,0,0.661743720148475,0.443458794925128,0.351339142772504,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.286836620748814,0,0,1.06748995729705,0,0,0,0,0,0,0.468642863667593,0,0,0.448346041655403,0,0,0.140450806702248,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.427114777637135,0,0.300091096084402,0.206105058476878,0,0.37223371266318,0.506328996723799,0.779496041289589,0,0.460249493211497,0,0.355009592516614,0.403008392910561,1.01736355386293,0,0,0,0,0.132529768321485,0.116193942869518,0.310983165046111,0.252320850875628,1.45990943630332,0,0,0,0.464367928031979,0.721879481669586,0.118306800039844,0,0,0,0,0,0.134831308160164,0,0,0,0,0,0,0,0,0,0,0.245976877086227,0.343135620597051,0,0,0,0.0925884451585296,0,0,0,0.34779121492523,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.112131084345361,0,0,0.258543431515556,0,0,0,0,0,0,0,0.142977993658148,0.542621605391443,0,0,0,0.791951872933429,0.301439377059586,0.871533458600294,0.199945982364114,0,0,0,0,0,0,0.434343920002738,0.205476322550383,0.716243852959582,0,0,0,0,0.254094624222463,0,0,0,0,0,0,0,0.24538298343828,0,0,0,0,0,0,0,0,0,0.664225598535437,0,0.0868836144680828,0.391602314925481,0,0,0,0,0.606255142892519,0,0,0,0,0.280660094433074,0,0.511707249066704,0.160853921143607,0,0.154209693802656,0.532685175939381,0.821271560138091,0.519254429183621,0.348631135379878,0,0.200506470303285,0.0920809889358963,0,0,0.393373244878272,0,0.308061348417659,0,0,0.422206515571503,0,0,0,0,0.541892875087706,1.00337954770971,0,0,0.895499018888713,0,0,0,0.656029291399411,0,0,0,0,0,0,0,1.16004861950546,0.154048617114644,0,0.275673144969061,0.751941714077915,0.290033387828457,0,0.0890320356467374,0,0,0,0,1.39453664789186,0.31481234683064,0,0.308033580176089,0,0,0.18532421910392,0,0,0.316379424718726,0,0.255897791311334,0,0.318203247925937,0.78494864019923,0.359744915166629,0.274537029736055,0,0,0,0,0.48763373908959,0,0,0,0,1.13008116620243,0,0,0,0,0.655894752046633,0,0.30982349809975,0.281695602532241,0.430234056612155,0.196498082026242,0,0.354761064070598,0.211107635297664,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.557216921387392,0,0,0,0,0,0,0,0,0,0,0,0,0.20453736500431,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.21787692703798,0,0,0.113942055847001,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.706765357169704,0,0,0,0,0.296521128680622,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.13070500632772,0.138674673013139,0,0,0,0,0,0,0,0,0,0,0,0.548167698587004,0.19871461170299,0,0,0.320635281006135,0,0,0,0,0,0,0.124252535565433,0.235694034616795,5.16435983079733,4.70712808405499,0,3.17845648891671,0,0,0,0.429765441419957,0,0,0,0,0,0,0,0,0,0,0.157566364614447,0,0.337017719270924,0,0,0,0,0,0.137539436597234,0.415440338029185,0,0,0,0,0,0,0.211200673038813,0,0,0,0,0,0,0,0,2.39460383124975,0,2.3854323049959,0,0,0,0,0,2.39521573038061,0.704815022316672,0,0,0,0,0,0,0,0,0,0,0,0.628216385000937,0,0,0,0,0,0,0,0.124980407962107,0,0,0,0,0,0.895528817321244,0.233713309847224,0.554805861502613,0.189403005275089,0,0.889811221596536,0,0.151230923763239,0.777186002913902,0,0.159296767163702,0,0.155262956876259,0,0.265841714557995,0,0.601030435988874,0.380805212168795,0,0,0.214821114084977,0,0,0,0.343395705182793,0,0,0.770479321629213,0,0,0,1.62065732026684,0,0.179088841081487,0,0.438568099157414,0.176689145945881,0,0.337884881306145,0,0,0,0,0,0,0,0.327609848846413,0,0,0,0,0,0.567515953566836,0.368211900503681,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0981477185010256,0,0,0.115525666150338,0.762764190934334,0,0,0,0.80682027481408,0,0,0,0.443568258651136,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.171488009437418,0,0,0.118193840883968,0.333694205676207,0,0,0.280272163313789,0,0.863710364874486,0,0,0,0,0,0,0.207216164163037,0,0,0,0.236664001461131,1.36341447614652,0,0,0.62041277132864,1.91107787795487,0,0,0,0,0,0,0,0,0,0,0,0.219881033490858,0.150962843566674,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.924351257262837,0.432626562123789,0.126166424835079,0,0.126698501011437,0.101988829741982,0.534434810531121,0.735159196278759,0.50141507858475,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0814032686109745,0,1.9307228228694,0,0,0,0,0,0,0 | |||
|short_description=p@chr17:47039007..47039034,- | |||
}} |
Revision as of 16:04, 20 January 2014
Short description: | p@chr17:47039007..47039034, - |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | No |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr17:47039007..47039034, - |
Coexpression cluster: | NA |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
smooth muscle cell of the pulmonary artery | 4.44e-11 | 1 |
glial cell (sensu Vertebrata) | 7.25e-10 | 15 |
glial cell | 7.25e-10 | 15 |
glioblast | 7.25e-10 | 15 |
glioblast (sensu Vertebrata) | 7.25e-10 | 15 |
neuron associated cell | 7.62e-09 | 17 |
neuron associated cell (sensu Vertebrata) | 7.62e-09 | 17 |
epithelial cell of uterus | 1.02e-07 | 6 |
stromal cell of endometrium | 1.02e-07 | 6 |
Ontology term | p-value | n |
---|---|---|
nervous system cancer | 2.42e-08 | 11 |
female reproductive endometrioid cancer | 1.02e-07 | 6 |