FFCP PHASE1:Hg19::chr17:46507567..46507608,-: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=8631 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=15605 | |||
|TSSclassifier=strong | |||
|UniProt=Q86WV1 | |||
|association_with_transcript=0bp_to_ENST00000336915,NM_001075099,NM_003726,uc002ini.1,uc002inj.1,uc010dbd.1,uc010dbe.1_5end | |||
|coexpression_cluster_id=C18 | |||
|description=CAGE_peak_1_at_SKAP1_5end | |||
|id=chr17:46507567..46507608,- | |||
|ontology_enrichment_celltype=CL:0000542!3.69e-30!53;CL:0000051!3.69e-30!53;CL:0000838!1.65e-29!52;CL:0000738!4.60e-22!140;CL:0000084!2.19e-17!25;CL:0000827!2.19e-17!25;CL:0000791!4.51e-17!18;CL:0000789!4.51e-17!18;CL:0002420!4.51e-17!18;CL:0002419!4.51e-17!18;CL:0000790!4.51e-17!18;CL:0000037!5.24e-17!172;CL:0000566!5.24e-17!172;CL:0002031!2.58e-16!124;CL:0000988!2.09e-15!182;CL:0002087!2.90e-15!119;CL:0002032!5.71e-15!165;CL:0000837!5.71e-15!165;CL:0000945!4.21e-11!24;CL:0000826!4.21e-11!24;CL:0000625!6.92e-11!11;CL:0000236!6.57e-08!14;CL:0000624!6.77e-07!6 | |||
|ontology_enrichment_celltype_v019=CL:0000084;7.74e-24;25!CL:0000542;4.32e-23;53!CL:0000791;7.36e-23;18!CL:0000789;7.36e-23;18!CL:0002419;7.36e-23;18!CL:0000945;1.60e-15;24!CL:0000625;2.34e-14;11!CL:0000236;6.13e-10;13!CL:0000624;6.80e-09;6!CL:1000507;7.30e-08;10!CL:1000494;7.30e-08;10!CL:0002087;1.02e-07;104 | |||
|ontology_enrichment_celltype_v019_2=CL:0000542,2.09e-42,53;CL:0000051,2.09e-42,53;CL:0000838,1.66e-41,52;CL:0000738,5.74e-25,136;CL:0000084,7.86e-24,25;CL:0000827,7.86e-24,25;CL:0000791,7.44e-23,18;CL:0000789,7.44e-23,18;CL:0002420,7.44e-23,18;CL:0002419,7.44e-23,18;CL:0000790,7.44e-23,18;CL:0000037,2.93e-20,168;CL:0002031,6.08e-20,120;CL:0000988,3.06e-19,177;CL:0002087,4.91e-19,115;CL:0002032,5.38e-18,161;CL:0000837,5.38e-18,161;CL:0000945,1.60e-15,24;CL:0000826,1.60e-15,24;CL:0000625,2.35e-14,11;CL:0000236,9.73e-11,14;CL:0000624,6.86e-09,6;CL:1000507,8.09e-08,10;CL:1000494,8.09e-08,10 | |||
|ontology_enrichment_development_v019=CL:0000051;4.32e-23;53!CL:0000790;7.36e-23;18 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0007023!2.46e-21!115;UBERON:0000178!2.64e-07!15;UBERON:0000179!2.64e-07!15;UBERON:0000463!2.64e-07!15 | |||
|ontology_enrichment_uberon_v019=UBERON:0000178;4.33e-10;15!UBERON:0000179;4.33e-10;15!UBERON:0000463;4.33e-10;15!UBERON:0004211;7.30e-08;10!UBERON:0009773;7.30e-08;10!UBERON:0001231;7.30e-08;10!UBERON:0004810;7.30e-08;10!UBERON:0002390;4.01e-07;32 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000178,4.30e-10,15;UBERON:0000179,4.30e-10,15;UBERON:0000463,4.30e-10,15;UBERON:0007023,3.19e-09,114;UBERON:0004810,8.09e-08,10 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.286235987131057,0,0,35.4558202670494,25.2869815505833,27.7849058037288,13.3743854128627,29.1710342553882,6.19264493264304,0,0,0,0,0,3.52320527201817,7.75593571944628,13.2359335330294,12.5866305015194,2.68698569087909,12.6318529747402,3.09090681161024,0.290796477559129,0.377875943688809,0,0,0.411167888021826,0,0,0,0.236482229888585,0,1.29096936716765,0,0.188242339542605,0,0.224723484445085,0.306083892370903,0,0,0,0.199463657621632,0,0,0,0,0,0.521482918420201,0,1.81619850790011,0.368277635987565,0,0,0,0,0,0,0,0,0,0,33.4392864476513,31.1299008419415,30.2433146313609,29.444385357089,28.4281150795569,36.7841561570869,32.3911987664582,35.2999889178085,48.9523153434126,18.79159005987,13.379562984383,9.25199300053181,6.1655941927969,2.10707267820062,74.3562931030289,55.0215067848831,65.1756751828444,75.5682959165865,99.4062913232451,106.525756290315,99.3616314880348,72.8624388029035,95.1577081143724,91.9365662522028,103.717879822001,60.71528554997,56.8359348836668,75.9703119268984,62.4551040196017,78.5366362341992,70.2878309388166,84.5429016763493,71.0841561873842,89.7409994164724,94.2722414260726,81.7833320248659,90.581049742982,83.4641385529133,69.0148461087804,67.4820951558346,61.1334983455757,65.4011582999078,56.2188269485556,75.7687206540854,91.9663356551572,57.8611353054982,46.2671538705468,58.9435323802992,0,0,0,0,0,0,0,0,0,0,0.527008714158756,4.38779902917337,0,0,0.97364218096405,0.348259474598534,0.531831842075461,0,1.14398982156026,0.371457501329565,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,5.27121669744253,3.87780264148325,0,0,0,0,0,0.709336764396714,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.121973706129595,0,0.116193942869518,0.10366105501537,0.252320850875628,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.590789906681404,0,0.737930631258681,0,0,0,0,0,0,0,0,0,0,0,0,0,0.790204397959275,0,0,0,0.148631162288728,0,0,0,0,0,0,14.2872338989824,16.7292024625129,31.9285297932789,35.7417484474064,49.2345490362882,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,79.1321116594303,59.8973511013859,55.2006591640364,68.2784953008261,0,0,0,0,0,0.749007023947182,2.99161459204025,1.65766205374414,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,47.763414034387,32.5728443236111,47.1735805491224,0,0,0,0,0,0,0,0,0,0,0.154209693802656,0,0,0,0,0.120859449591622,0,0,0,0,0,4.51199612907412,5.85316561993552,3.92174884588428,2.92278449306521,3.4832037534649,0,0,0.215915916102139,0,1.08378575017541,1.00337954770971,8.6657932835313,14.1282921517883,4.02974558499921,3.28889814968902,1.5686127061494,0,0,0,1.75169719801128,0,0,0,0,0,0,0,0,0,0,0,0.170453254832202,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.6196469961995,0,0,0.0982490410131212,0,0,0.844430541190656,0,0,0,0.192444225451024,0.670302275535787,0,2.2594512186427,0.43050537267123,0,0,0,25.8798280708406,26.7623022499831,24.494829048489,41.2140971541975,34.5544309392403,22.6965658917451,27.0015718619057,36.4837581095364,0,0,0,13.7494349593032,0,0,3.18852545457645,0,0,16.298865869739,0,0,0,0,0,14.0512175575331,0,0,3.83261613921294,0,0,0,0,0,0.835218521685727,0,0,0,0,10.6670108032685,0.879049075631364,0,33.6559020517985,0,0,0.890894042497916,0,0,0.140669416410513,0,0,0,2.78947183551498,25.4181202288656,11.840839149151,0,13.6624134061787,0,23.4556396494523,0,0,5.12945709312055,35.922463852041,0,0,0,0,0,0,1.44999915086959,0.796554137998498,0,0.472775363535873,0,0,0,0,0,0,0.110579259931225,0,0,0,0.139423744278603,2.46240827212151,0,0,0,1.08647371922008,0.638002319463839,0.183195186803725,1.06606955203727,24.5263915669768,0,0,0,0,0,0,0.158936578980379,0,0,0,0,5.97157158647103,2.56526937059684,1.22206028986725,0,0,0,0.539209063845416,1.60515529459758,0,0,1.17398771359254,0,12.2321164883311,3.62972148145992,0.61214552326098,3.34888872030986,0,0,0,0,0,0,0,0,0,0,0,5.59125338374496,0,0,0,0,1.84279131327997,0,0,0,0,0.189932387867636,4.10657903743086,1.68333522528221,5.76323085796252,0.39961921916426,4.46680293177729,0,1.71594997861965,0,0.621262677827163,0.942776138467182,0,0,0,0,0,0.273810757783986,0,0,11.5670435882898,0.837847203816763,0.229160424011684,0,0.199679000498991,0.858452096273142,0,0.739018197353989,0,0,0,0,0,0,16.4266264207622,0,0.408610218334727,0,0,0,0.449947783103001,0,0.242998226632099,0,5.51639951094387,5.97982304738978,0,0,0,2.1440859791201,0,0,0,0,0,0,0,0,0.566560457600628,0.293104467356165,0,0,0.13223260174269,0.171086837884329,0,6.30045734149399,0.943225830597996,4.14239055347196,15.8773126979824,12.6471444414684,9.49982267370988,0,0,0.5013797880454,0,0,0,0,0.244052529803926,0.1251909307065,0.573409195690071,0.776503360757966,1.1177352529449,0,0,0,0,4.47005057426526,0,0.724605143054126,0,0,0,0,0,0,0,0,0,0,0,0,0.155262956876259,0,0,0,0,0,0.406870733204662,0,0.214821114084977,0,0,0,0,0,0,0,0,0,0,0.694567422971502,0,0,0,0,0.353378291891762,0,0,0,0,0,0.276516872303462,1.36402216187572,0.664324201566815,0.327130788511688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| |||
|short_description=p1@SKAP1 | |||
}} |
Revision as of 15:59, 20 January 2014
Short description: | p1@SKAP1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_SKAP1_5end |
Coexpression cluster: | C18_CD4_CD8_thymus_Whole_Peripheral_Natural_blood |
Association with transcript: | 0bp_to_ENST00000336915, NM_001075099, NM_003726, uc002ini.1, uc002inj.1, uc010dbd.1, uc010dbe.1_5end |
EntrezGene: | SKAP1 |
HGNC: | 15605 |
UniProt: | Q86WV1 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
lymphocyte | 2.09e-42 | 53 |
common lymphoid progenitor | 2.09e-42 | 53 |
lymphoid lineage restricted progenitor cell | 1.66e-41 | 52 |
leukocyte | 5.74e-25 | 136 |
T cell | 7.86e-24 | 25 |
pro-T cell | 7.86e-24 | 25 |
mature alpha-beta T cell | 7.44e-23 | 18 |
alpha-beta T cell | 7.44e-23 | 18 |
immature T cell | 7.44e-23 | 18 |
mature T cell | 7.44e-23 | 18 |
immature alpha-beta T cell | 7.44e-23 | 18 |
hematopoietic stem cell | 2.93e-20 | 168 |
hematopoietic lineage restricted progenitor cell | 6.08e-20 | 120 |
hematopoietic cell | 3.06e-19 | 177 |
nongranular leukocyte | 4.91e-19 | 115 |
hematopoietic oligopotent progenitor cell | 5.38e-18 | 161 |
hematopoietic multipotent progenitor cell | 5.38e-18 | 161 |
lymphocyte of B lineage | 1.60e-15 | 24 |
pro-B cell | 1.60e-15 | 24 |
CD8-positive, alpha-beta T cell | 2.35e-14 | 11 |
B cell | 9.73e-11 | 14 |
CD4-positive, alpha-beta T cell | 6.86e-09 | 6 |
kidney tubule cell | 8.09e-08 | 10 |
nephron tubule epithelial cell | 8.09e-08 | 10 |
Ontology term | p-value | n |
---|---|---|
blood | 4.30e-10 | 15 |
haemolymphatic fluid | 4.30e-10 | 15 |
organism substance | 4.30e-10 | 15 |
adult organism | 3.19e-09 | 114 |
nephron tubule epithelium | 8.09e-08 | 10 |