FFCP PHASE1:Hg19::chr17:42295955..42295964,-: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=7343 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=12511 | |||
|TSSclassifier=strong | |||
|UniProt= | |||
|association_with_transcript=-47bp_to_ENST00000537550_5end | |||
|description=CAGE_peak_22_at_UBTF_5end | |||
|id=chr17:42295955..42295964,- | |||
|ontology_enrichment_celltype=CL:0000542!1.62e-10!53;CL:0000051!1.62e-10!53;CL:0000838!3.95e-10!52;CL:0000945!2.39e-07!24;CL:0000826!2.39e-07!24 | |||
|ontology_enrichment_celltype_v019=CL:0000542;8.43e-09;53!CL:0000945;2.32e-08;24!CL:0000084;5.28e-08;25!CL:0000511;2.91e-07;1!CL:0002625;2.91e-07;1!CL:0000216;2.91e-07;1 | |||
|ontology_enrichment_celltype_v019_2=CL:0000838,4.73e-14,52;CL:0000542,9.63e-14,53;CL:0000051,9.63e-14,53;CL:0000945,1.26e-08,24;CL:0000826,1.26e-08,24;CL:0000084,8.48e-08,25;CL:0000827,8.48e-08,25;CL:0000511,1.36e-07,1;CL:0002625,1.36e-07,1;CL:0000216,1.36e-07,1 | |||
|ontology_enrichment_development_v019=CL:0000051;8.43e-09;53!UBERON:0005425;2.91e-07;1 | |||
|ontology_enrichment_disease=DOID:162!1.20e-11!235;DOID:14566!1.24e-11!239;DOID:2531!2.50e-11!51;DOID:0060083!2.50e-11!51;DOID:1240!1.94e-07!39;DOID:0050686!4.12e-07!137;DOID:0060058!6.27e-07!10 | |||
|ontology_enrichment_disease_v019=DOID:0060058;1.13e-09;10!DOID:2355;2.91e-07;1 | |||
|ontology_enrichment_disease_v019_2=DOID:0060058,1.71e-09,10;DOID:2355,1.20e-07,1 | |||
|ontology_enrichment_uberon= | |||
|ontology_enrichment_uberon_v019=UBERON:0001136;2.91e-07;1!UBERON:0000941;2.91e-07;1!UBERON:0001343;2.91e-07;1!UBERON:0001785;2.91e-07;1!UBERON:0002464;2.91e-07;1!UBERON:0004904;2.91e-07;1!UBERON:0001021;2.91e-07;1!UBERON:0004910;2.91e-07;1!UBERON:0004813;2.91e-07;1 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001136,1.36e-07,1;UBERON:0001343,1.36e-07,1;UBERON:0004910,1.36e-07,1;UBERON:0005154,1.36e-07,1;UBERON:0005295,1.36e-07,1;UBERON:0004813,1.36e-07,1;UBERON:0005297,1.36e-07,1;UBERON:0005294,1.36e-07,1;UBERON:0010141,1.36e-07,1;UBERON:0005891,1.36e-07,1;UBERON:0000941,1.63e-07,1;UBERON:0001785,1.63e-07,1;UBERON:0002464,1.63e-07,1;UBERON:0004904,1.63e-07,1;UBERON:0001021,1.63e-07,1;UBERON:0003902,1.63e-07,1;UBERON:0005425,1.63e-07,1 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0.697801167972428,0.218441372130172,0,0,0,0,0,0,0,0.246242116153576,0,0,0.286235987131057,0,0.376627918784408,0.916960868975415,1.39571002064908,1.33808328233255,0,0.383829398097213,0,0,0.30120591877825,0.369754010166788,1.08454080812422,0.995184627411951,0.293600439334847,0.553995408531877,0.401088894940283,0.217010870715852,0,0,0.257575567634187,0.145398238779565,0,0,0,0,0.619412741790207,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.502497330513487,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.546138611262131,0,1.70692089026603,0.800791974072025,0,0,1.90810750907073,0,0.587237189370939,0.382273228125229,0,0,0.263384084775077,0.196709770113833,1.17903228824749,0.205601498999509,0,0,0,0,0,0,0,0,0,0,0.164437904603676,0,0,0.14828656316206,0,0,0,0.383220493601921,0.34362744548263,0,0,1.30216690771284,0,0,0.383959833463255,0,0.473554504088034,0,0.403213486449465,1.33720097891754,0.579297615531196,0,0,0.12786256184353,0,0,0.144846518960824,0,0,0.189069634328136,0,0.087834785693126,0.0654895377488563,0,0.370784442784429,0.324547393654683,0,0.26591592103773,0.476981248610684,0.571994910780128,0,0,0,0.347140501607594,0.56530794192401,0,0,0,0,0,0,0.805658634218294,0,0.24406205754817,0,0,0.0892997282840798,0.22452937262617,0.112611480483322,0,0,0.183201743930407,0,0,0.436094052142534,0,0,0.132409180813219,0,0.354668382198357,0,0,0.24666754841716,0,0,0,0,0,0,0,0.570471821544449,0,0.469737994575059,0.161872944368132,0.280901613404497,0.204154171254893,0.245668634623536,0.206651562351531,0,0,0,0,0.168336113954066,0.125118519871964,0,0.877955241761676,0.30648779579902,0.150238058906597,0,0.179389635688862,0,0,0,0.103052529238439,0.257640540045629,0.18611685633159,0,0.194874010322397,0,0.0920498986422993,0.484938170456436,1.06502877754984,0,0,0.193260853163297,0,0.286804595389004,0.487894824518382,1.19276791489337,0.580969714347592,0.10366105501537,0.252320850875628,0,0,0.643240938192885,0,1.39310378409594,0,0.473227200159376,0,0.482022059766964,0.110293972732394,0,0,0.539325232640658,0.588664395376038,0.38474715694639,0,1.40241773803446,0,0,0,0,0.590789906681404,0.441463099414651,0.368965315629341,0.171567810298526,0.329250856225877,0,0.402115889646523,0.277765335475589,0,0,0,0.34779121492523,0,0,0,0.380508304469197,0,0,0,0,0.594524649154913,0,0,0.141775097242386,0,0,0,0,0.352193736052904,0.207328115540772,0.144119953416961,0.12624243342638,0.190493682876507,0,0,0,0.411309970813294,0,0,0.112131084345361,0,0.22001485746285,0,0,0,0,0,0,0,0.799266537048298,0,0,0,0,0,1.58390374586686,0.301439377059586,0,0,0,0,0,0.239624855491583,0,0,0,0,0,0.672510863961164,0.788123040807709,0.646882724578552,0.128343036279748,0,0,0,0.167516265334349,0,0,0,0,0.12269149171914,0.500170521059677,0.542530047399471,0.207970861530807,0.178428988797162,0,0.117141414992713,0,0,0,0,0.184369168541703,0,0,0,0.413536052245775,0,0.533637789017222,0,0,0,0,0.153461973288062,0.561320188866147,0,0,0.160853921143607,0,0.616838775210622,0.532685175939381,0.246381468041427,0.519254429183621,0.232420756919918,0.241718899183244,0,0,0.114814448164607,0.182091168006717,0,0.451199612907412,0.0770153371044148,0,1.46139224653261,0,0,0.170093705276516,0,0,0,0,0.254876273045038,0,0.223874754722178,0.219259876645935,0.261435451024901,0.512900250232778,0,0,0,0.183138929636687,0,0.574265537996172,0,1.6068392984416,0.096670718292122,0.154048617114644,0.307007349452259,0.413509717453592,0.107420244868274,0.145016693914229,0.255679882248303,0.0890320356467374,0,0.192190067365106,0.255225424989168,0.10115778085555,0,0.62962469366128,0,0,0,0,0,0,0.372158369359667,0,0,0.255897791311334,0,0,0,0,0.54907405947211,0.117812402345686,0,0,0,0.975267478179181,0.243713489631284,0,0.272999822815972,0,0,0.551365343546124,0,0,0,0,0,0.6196469961995,0,0.286822704408103,0.196498082026242,0,0,0.422215270595328,0,0,0.699869440489966,0.192444225451024,0.670302275535787,1.08890984861323,0.376575203107117,0,0,0,0,0,0.764637207142375,1.13929437434833,0.952927101831156,0.411362273086194,1.29694662238543,1.08006287447623,0,0.213648142254946,0,0.490080431962063,0.557409525377156,0.432807638929335,0.569134746787313,0.956557636372934,0.59873811429845,0,0,0.324621940274555,0.842391534340376,2.05411211129873,0.94007937463814,0,0.169291777801603,0.481764225311099,0.403599414382095,0.425846237690326,0.343505344755765,0.614481528616916,0.223676107892416,0.500547425135725,1.36771666781428,0.556812347790485,1.23087398947712,0,0,0,0.18714054040822,0.146508179271894,1.33496573924465,1.00299045849731,0.284136146806413,0,0,0,0,0.281338832821026,0.222617410045812,1.15362711958732,0.63337622438398,0.19924798825107,0.552567831062295,1.0077309914171,0,0.615424027305347,0,0.359473404589307,0,0,0,0,0,0,0.185536196323703,0,0,0.0874599999961957,0,0.455173793141999,0,0.472775363535873,2.06846023944879,0.583209226766509,0.347249989866585,0,0.120596438625408,0,1.10579259931225,0,0,0.10893846351899,0,0.0769502585037971,0.227884111694002,0.69169171316418,0.0897576444097721,0,0,0.274792780205587,0,0,0.7849012819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| |||
|short_description=p22@UBTF | |||
}} |
Revision as of 15:38, 20 January 2014
Short description: | p22@UBTF |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_22_at_UBTF_5end |
Coexpression cluster: | NA |
Association with transcript: | -47bp_to_ENST00000537550_5end |
EntrezGene: | UBTF |
HGNC: | 12511 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
lymphoid lineage restricted progenitor cell | 4.73e-14 | 52 |
lymphocyte | 9.63e-14 | 53 |
common lymphoid progenitor | 9.63e-14 | 53 |
lymphocyte of B lineage | 1.26e-08 | 24 |
pro-B cell | 1.26e-08 | 24 |
T cell | 8.48e-08 | 25 |
pro-T cell | 8.48e-08 | 25 |
androgen binding protein secreting cell | 1.36e-07 | 1 |
seminiferous tubule epithelial cell | 1.36e-07 | 1 |
Sertoli cell | 1.36e-07 | 1 |
Ontology term | p-value | n |
---|---|---|
mesothelium | 1.36e-07 | 1 |
seminiferous tubule of testis | 1.36e-07 | 1 |
epithelium of male gonad | 1.36e-07 | 1 |
epithelial cord | 1.36e-07 | 1 |
sex cord | 1.36e-07 | 1 |
seminiferous tubule epithelium | 1.36e-07 | 1 |
testis sex cord | 1.36e-07 | 1 |
genital ridge | 1.36e-07 | 1 |
primitive sex cord of indifferent gonad | 1.36e-07 | 1 |
coelomic epithelium | 1.36e-07 | 1 |
cranial nerve II | 1.63e-07 | 1 |
cranial nerve | 1.63e-07 | 1 |
nerve trunk | 1.63e-07 | 1 |
nerve connecting eye with brain | 1.63e-07 | 1 |
nerve | 1.63e-07 | 1 |
retinal neural layer | 1.63e-07 | 1 |
presumptive neural retina | 1.63e-07 | 1 |