FFCP PHASE1:Hg19::chr17:39777995..39778013,-: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
Line 1: | Line 1: | ||
{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |||
|TSSclassifier=not | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|coexpression_cluster_id=C544 | |||
|description=CAGE_peak_at_chr17:39777995..39778013,- | |||
|id=chr17:39777995..39778013,- | |||
|ontology_enrichment_celltype=CL:0000066!2.77e-29!254;CL:0002076!1.71e-27!43;CL:0000223!1.23e-19!59;CL:0002368!3.93e-17!13;CL:0002159!1.10e-16!13;CL:0002251!5.42e-13!21;CL:0000244!3.25e-10!4;CL:0000731!3.25e-10!4;CL:0002202!2.59e-09!9;CL:0002632!2.59e-09!9;CL:0002328!1.48e-08!3;CL:0000622!2.69e-08!5;CL:0002077!9.03e-08!33;CL:0000362!1.23e-07!8;CL:0002166!1.53e-07!3;CL:0002621!1.87e-07!3;CL:0000063!3.07e-07!578;CL:0000240!6.60e-07!6;CL:0000311!6.60e-07!6;CL:0000079!6.60e-07!6;CL:0000237!6.60e-07!6;CL:0000036!6.60e-07!6;CL:0000357!6.60e-07!6;CL:0000114!6.60e-07!6;CL:0000154!6.90e-07!6;CL:0002150!8.20e-07!3;CL:0000861!8.20e-07!3 | |||
|ontology_enrichment_celltype_v019=CL:0002368;1.01e-26;13!CL:0002076;1.98e-22;42!CL:0002159;4.30e-19;14!CL:0002328;8.45e-15;3!CL:0000622;9.09e-15;5!CL:0002202;1.47e-12;9!CL:0002632;1.47e-12;9!CL:0000154;2.54e-12;6!CL:0000362;2.92e-12;9!CL:0000240;3.70e-12;6!CL:0000311;3.70e-12;6!CL:0000079;3.70e-12;6!CL:0000237;3.70e-12;6!CL:0000244;5.60e-11;4!CL:0000731;5.60e-11;4!CL:0000317;6.14e-10;2!CL:1000448;6.14e-10;2!CL:0002308;6.14e-10;2!CL:0002140;6.14e-10;2!CL:0002077;1.25e-09;34!CL:0000312;1.26e-08;5!CL:0000150;3.12e-08;9!CL:0002251;1.80e-07;20!CL:0002231;3.66e-07;3!CL:0002623;4.45e-07;3!CL:0002577;6.75e-07;3!CL:0000307;8.79e-07;3 | |||
|ontology_enrichment_celltype_v019_2=CL:0002076,4.42e-27,42;CL:0002368,1.23e-26,13;CL:0000066,7.05e-20,253;CL:0002159,4.54e-19,14;CL:0000223,1.71e-18,58;CL:0002328,8.47e-15,3;CL:0000622,1.15e-14,5;CL:0002202,1.40e-12,9;CL:0002632,1.40e-12,9;CL:0000362,2.62e-12,9;CL:0000240,2.82e-12,6;CL:0000311,2.82e-12,6;CL:0000079,2.82e-12,6;CL:0000237,2.82e-12,6;CL:0000036,2.82e-12,6;CL:0000357,2.82e-12,6;CL:0000114,2.82e-12,6;CL:0000154,3.07e-12,6;CL:0002077,4.02e-11,34;CL:0000244,6.41e-11,4;CL:0000731,6.41e-11,4;CL:0000317,7.86e-10,2;CL:1000448,7.86e-10,2;CL:0002308,7.86e-10,2;CL:0002140,7.86e-10,2;CL:0000312,9.70e-09,5;CL:0000150,3.53e-08,9;CL:0002251,1.66e-07,20;CL:0002231,3.40e-07,3;CL:0002623,4.59e-07,3;CL:0002577,6.01e-07,3;CL:0000068,8.30e-07,3;CL:0000069,8.30e-07,3;CL:0000307,8.30e-07,3;CL:0000377,8.30e-07,3 | |||
|ontology_enrichment_development_v019=CL:0000357;3.70e-12;6!CL:0000114;3.70e-12;6!CL:0000223;1.10e-10;58!CL:0000377;8.79e-07;3 | |||
|ontology_enrichment_disease=DOID:1749!1.13e-10!14;DOID:305!7.87e-10!106 | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001004!4.53e-27!72;UBERON:0000065!6.74e-22!53;UBERON:0004119!5.05e-20!169;UBERON:0000925!5.05e-20!169;UBERON:0006595!5.05e-20!169;UBERON:0001737!1.18e-18!9;UBERON:0000072!1.10e-17!46;UBERON:0001557!1.58e-16!19;UBERON:0008947!9.19e-15!38;UBERON:0003258!9.19e-15!38;UBERON:0001007!5.76e-12!155;UBERON:0001555!5.76e-12!155;UBERON:0007026!5.76e-12!155;UBERON:0000365!1.12e-11!5;UBERON:0001041!2.68e-11!98;UBERON:0000077!8.58e-11!130;UBERON:0000166!1.28e-10!21;UBERON:0004921!9.32e-10!129;UBERON:0004185!9.32e-10!129;UBERON:0005910!1.18e-09!6;UBERON:0007196!1.99e-09!14;UBERON:0001558!1.99e-09!14;UBERON:0000161!2.64e-09!35;UBERON:0005631!3.96e-09!14;UBERON:0000158!3.96e-09!14;UBERON:0000165!5.94e-09!28;UBERON:0000930!5.94e-09!28;UBERON:0004815!1.48e-08!3;UBERON:0002031!1.48e-08!3;UBERON:0000064!5.14e-08!219;UBERON:0003102!1.21e-07!95;UBERON:0001949!1.87e-07!3;UBERON:0003729!2.85e-07!5;UBERON:0001723!3.70e-07!3;UBERON:0001033!3.70e-07!3;UBERON:0010056!3.70e-07!3;UBERON:0000063!5.44e-07!97;UBERON:0000062!6.27e-07!511 | |||
|ontology_enrichment_uberon_v019=UBERON:0004815;8.45e-15;3!UBERON:0002031;8.45e-15;3!UBERON:0000065;5.93e-11;44!UBERON:0001003;4.47e-10;15!UBERON:0007376;4.47e-10;15!UBERON:0002419;6.14e-10;2!UBERON:0007771;6.14e-10;2!UBERON:0003297;6.14e-10;2!UBERON:0001821;6.14e-10;2!UBERON:0003487;6.14e-10;2!UBERON:0001820;6.14e-10;2!UBERON:0002185;4.72e-09;5!UBERON:0000365;7.24e-09;5!UBERON:0001004;4.18e-08;65!UBERON:0005910;1.88e-07;6!UBERON:0007196;2.08e-07;15!UBERON:0001558;2.08e-07;15!UBERON:0000072;5.80e-07;37 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001004,5.02e-15,74;UBERON:0004815,8.47e-15,3;UBERON:0002031,8.47e-15,3;UBERON:0004119,7.53e-14,160;UBERON:0000925,7.53e-14,160;UBERON:0006595,7.53e-14,160;UBERON:0000065,7.53e-13,54;UBERON:0003102,2.83e-10,99;UBERON:0001003,3.58e-10,15;UBERON:0007376,3.58e-10,15;UBERON:0007383,3.58e-10,15;UBERON:0002419,7.86e-10,2;UBERON:0007771,7.86e-10,2;UBERON:0003297,7.86e-10,2;UBERON:0001821,7.86e-10,2;UBERON:0003487,7.86e-10,2;UBERON:0001820,7.86e-10,2;UBERON:0005089,7.86e-10,2;UBERON:0005088,7.86e-10,2;UBERON:0002185,4.73e-09,5;UBERON:0000365,8.07e-09,5;UBERON:0008947,7.77e-08,38;UBERON:0003258,7.77e-08,38;UBERON:0005631,1.44e-07,14;UBERON:0000158,1.44e-07,14;UBERON:0000072,1.83e-07,47;UBERON:0007196,2.03e-07,15;UBERON:0001558,2.03e-07,15;UBERON:0005910,2.05e-07,6 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0.245733936501509,0,0.218441372130172,1.05506791291381,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.67768489791571,5.12050061923025,9.98335827450327,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.256160706529101,0.236482229888585,0,0,0,0,0,0,0,0,0,0.329851300186716,0.199463657621632,0,0,0,0,0,0,0.217188844705117,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.364295288292542,9.64039551239516,0,0,0.132957960518865,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,5.66922267785295,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.966304265816484,1.90922284413584,0.573609190778008,0,0,0,0,0,0,0,0,0,0,0,1.0647612003586,0.505754070234305,1.68707720918437,1.21323370005633,0.653638332277218,0.474541238222193,0.808987848960987,0.98110732562673,0.769494313892781,0,0,0,0,0,0,0,0,0,0,1.97550513735526,4.49607013030478,3.41798506199545,2.31471112896324,0,0,0,0,0,0,0,0,0,0,0,0,0,0.93733833986777,1.34385702559088,1.13420077793909,0.895585227028483,0.581267877027924,4.21720947081732,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.42502057157008,0,2.72151263996712,0,0,0,0,0,0,0,0,0,0,0,0,0,2.6065841139427,15.3775251522947,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.14853107599234,5.20048196829217,0,0,0,0,0,0,0,0,0,2.47927373041467,4.03599141466723,1.02090169995667,4.8555734810664,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.63577591633371,3.35151137767894,0,0,0.86101074534246,10.1082885400575,8.42517291719684,1.1486170010348,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.67121139316383,0,2.15012491469462,0,0,0,0,0.422250816255987,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.1137934482855,0,0,0,0,0,0,0,0,0,0,0,0,1.53366118706464,0,0.341826167541004,0,0,0,0.31900115973192,0.366390373607449,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0979923974143777,0.783532859223623,0.17472666824203,0,0.387025325156341,0.219267951258557,0.574808199372465,0,0,0,0,0,0,0,0,0,0.799238438328521,0,0,0,0,0,2.12124631155116,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.67717343799633,0,0,0,0,1.72723677587501,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.245772908753719,0,0,0,0,0,0,4.61602375474167,1.24415452006595,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0981477185010256,0,1.28400018965175,0.462102664601353,0,0,0,0,0,0,0,0.163771917510097,0.147856086217045,0,0,0,0,0,0,0,0,0.127762427639595,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,5.59483643240199,2.21934020222135,0,0,0,0,0,0.22910686854405,0,0,0,0,0,0,0,0,1.94284397223656,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.07132363163395,0,0,0,0.458729283404541,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.23806443146374,0,0.124149428591716,0,0,0,1.52401723527873,0.342233301085281,0,0.0717222053926763,0.665320713092027,0.0814032686109745,0,0,0,0,0,0,0,0,0 | |||
|short_description=p@chr17:39777995..39778013,- | |||
}} |
Revision as of 15:20, 20 January 2014
Short description: | p@chr17:39777995..39778013, - |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | No |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr17:39777995..39778013, - |
Coexpression cluster: | C544_nasal_Keratinocyte_Esophageal_Urothelial_Placental_Corneal_Prostate |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
respiratory system | 5.02e-15 | 74 |
lower respiratory tract epithelium | 8.47e-15 | 3 |
epithelium of bronchus | 8.47e-15 | 3 |
endoderm-derived structure | 7.53e-14 | 160 |
endoderm | 7.53e-14 | 160 |
presumptive endoderm | 7.53e-14 | 160 |
respiratory tract | 7.53e-13 | 54 |
surface structure | 2.83e-10 | 99 |
skin epidermis | 3.58e-10 | 15 |
outer epithelium | 3.58e-10 | 15 |
enveloping layer of ectoderm | 3.58e-10 | 15 |
skin gland | 7.86e-10 | 2 |
epidermis gland | 7.86e-10 | 2 |
gland of integumental system | 7.86e-10 | 2 |
sebaceous gland | 7.86e-10 | 2 |
skin sebaceous gland | 7.86e-10 | 2 |
sweat gland | 7.86e-10 | 2 |
sweat gland placode | 7.86e-10 | 2 |
sebaceous gland placode | 7.86e-10 | 2 |
bronchus | 4.73e-09 | 5 |
urothelium | 8.07e-09 | 5 |
respiratory primordium | 7.77e-08 | 38 |
endoderm of foregut | 7.77e-08 | 38 |
extraembryonic membrane | 1.44e-07 | 14 |
membranous layer | 1.44e-07 | 14 |
segment of respiratory tract | 1.83e-07 | 47 |
tracheobronchial tree | 2.03e-07 | 15 |
lower respiratory tract | 2.03e-07 | 15 |
transitional epithelium | 2.05e-07 | 6 |