FFCP PHASE1:Hg19::chr17:38978586..38978620,-: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=3858 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=6413 | |||
|TSSclassifier=weak | |||
|UniProt=P13645 | |||
|association_with_transcript=-135bp_to_M19156_5end | |||
|coexpression_cluster_id=C202 | |||
|description=CAGE_peak_5_at_KRT10_5end | |||
|id=chr17:38978586..38978620,- | |||
|ontology_enrichment_celltype=CL:0000622!2.18e-18!5;CL:0002623!1.07e-17!3;CL:0002150!1.45e-16!3;CL:0000861!1.45e-16!3;CL:0000154!2.41e-15!6;CL:0001014!5.82e-12!2;CL:0001016!5.82e-12!2;CL:0000150!2.95e-10!9 | |||
|ontology_enrichment_celltype_v019=CL:0000622;2.17e-63;5!CL:0002623;6.68e-60;3!CL:0000154;6.05e-53;6!CL:0000150;1.63e-35;9!CL:0001014;2.73e-11;2!CL:0001016;2.73e-11;2!CL:0000317;3.35e-11;2!CL:1000448;3.35e-11;2!CL:0002308;3.35e-11;2!CL:0002140;3.35e-11;2!CL:0000151;1.15e-09;36!CL:0002251;1.28e-09;20 | |||
|ontology_enrichment_celltype_v019_2=CL:0000622,2.17e-63,5;CL:0002623,6.68e-60,3;CL:0000154,6.05e-53,6;CL:0000150,1.63e-35,9;CL:0001014,2.73e-11,2;CL:0001016,2.73e-11,2;CL:0000317,3.35e-11,2;CL:1000448,3.35e-11,2;CL:0002308,3.35e-11,2;CL:0002140,3.35e-11,2;CL:0002251,1.28e-09,20;CL:0000151,3.34e-09,36 | |||
|ontology_enrichment_development_v019=UBERON:0004874;1.88e-21;1 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0003408!1.24e-13!10;UBERON:0000341!1.24e-11!2;UBERON:0001044!4.43e-09!6;UBERON:0003293!4.43e-09!6;UBERON:0003294!4.43e-09!6;UBERON:0010047!4.43e-09!6;UBERON:0000167!4.43e-09!6;UBERON:0001042!7.75e-09!10;UBERON:0009145!7.75e-09!10;UBERON:0008814!1.09e-08!15;UBERON:0000974!1.17e-08!10;UBERON:0001723!2.39e-08!3;UBERON:0001033!2.39e-08!3;UBERON:0010056!2.39e-08!3;UBERON:0006562!4.86e-08!11;UBERON:0000078!1.37e-07!18;UBERON:0000989!4.33e-07!1;UBERON:0008811!4.33e-07!1;UBERON:0006258!4.33e-07!1;UBERON:0005876!4.33e-07!1;UBERON:0004874!4.33e-07!1;UBERON:0007029!4.58e-07!1;UBERON:0001557!8.48e-07!19 | |||
|ontology_enrichment_uberon_v019=UBERON:0001044;2.06e-30;6!UBERON:0003293;2.06e-30;6!UBERON:0003294;2.06e-30;6!UBERON:0010047;2.06e-30;6!UBERON:0003408;2.06e-30;6!UBERON:0000167;2.06e-30;6!UBERON:0000989;1.88e-21;1!UBERON:0008811;1.88e-21;1!UBERON:0007029;2.30e-21;1!UBERON:0001041;1.82e-13;14!UBERON:0000165;1.04e-11;28!UBERON:0002419;3.35e-11;2!UBERON:0007771;3.35e-11;2!UBERON:0003297;3.35e-11;2!UBERON:0001821;3.35e-11;2!UBERON:0003487;3.35e-11;2!UBERON:0001820;3.35e-11;2!UBERON:0002365;5.65e-11;31!UBERON:0002330;5.65e-11;31!UBERON:0000161;4.30e-10;19!UBERON:0000166;4.30e-10;19!UBERON:0001723;7.76e-08;3!UBERON:0001033;7.76e-08;3 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001044,2.06e-30,6;UBERON:0003293,2.06e-30,6;UBERON:0003294,2.06e-30,6;UBERON:0010047,2.06e-30,6;UBERON:0000167,2.06e-30,6;UBERON:0000989,1.88e-21,1;UBERON:0008811,1.88e-21,1;UBERON:0006258,1.88e-21,1;UBERON:0005876,1.88e-21,1;UBERON:0004874,1.88e-21,1;UBERON:0007029,2.30e-21,1;UBERON:0003408,1.44e-18,10;UBERON:0000166,8.89e-15,22;UBERON:0000165,2.64e-11,29;UBERON:0000930,2.64e-11,29;UBERON:0002419,3.35e-11,2;UBERON:0007771,3.35e-11,2;UBERON:0003297,3.35e-11,2;UBERON:0001821,3.35e-11,2;UBERON:0003487,3.35e-11,2;UBERON:0001820,3.35e-11,2;UBERON:0005089,3.35e-11,2;UBERON:0005088,3.35e-11,2;UBERON:0002365,1.24e-10,31;UBERON:0002330,1.24e-10,31;UBERON:0000161,3.57e-09,36;UBERON:0001723,8.29e-08,3;UBERON:0001033,8.29e-08,3;UBERON:0010056,8.29e-08,3;UBERON:0003102,4.04e-07,99;UBERON:0001444,8.12e-07,49 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.196468613246569,0,0.370784442784429,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.110293972732394,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.116210378459959,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.60024098414608,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.33029046061003,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.1137934482855,0,0,0,0,0,0,0,0,0,0,0,0,4.0432885840795,0.0769502585037971,0,0,0,0,0,0,0,0,0,0,0.225595660617181,0.19606253431774,0.335643173951685,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.290268993867255,0.146178634172371,0.246346371159628,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.235694034616795,0,0,0,0,0,0,0,0,0,0,0,0,0.199679000498991,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.2249738915515,6.1904156364636,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.122026264901963,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.151230923763239,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.231522474323834,0,0,0,0,0,0,0.168942440653073,0,0,0.303859956177382,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,27.7878259898005,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.03608082081518,8.8773608088854,142.399490333703,0,0,0,0,0,0,0,0,0,0,0,0,0,14.5713297917742,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.213233981900981,0.23806443146374,0.322944549180031,0.124149428591716,0.112131862580613,0,0,0.653150243690884,1.02669990325584,0,0,0,0,0,0,0.0898252021065869,0,0.122241444182866,0,0,0,0 | |||
|short_description=p5@KRT10 | |||
}} |
Revision as of 15:14, 20 January 2014
Short description: | p5@KRT10 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | No |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_5_at_KRT10_5end |
Coexpression cluster: | C202_salivary_skin_penis_tongue_uterus_cervical_immature |
Association with transcript: | -135bp_to_M19156_5end |
EntrezGene: | KRT10 |
HGNC: | 6413 |
UniProt: | P13645 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
acinar cell | 2.17e-63 | 5 |
acinar cell of salivary gland | 6.68e-60 | 3 |
protein secreting cell | 6.05e-53 | 6 |
glandular epithelial cell | 1.63e-35 | 9 |
CD1a-positive Langerhans cell | 2.73e-11 | 2 |
immature CD1a-positive Langerhans cell | 2.73e-11 | 2 |
sebum secreting cell | 3.35e-11 | 2 |
epithelial cell of sweat gland | 3.35e-11 | 2 |
epithelial cell of skin gland | 3.35e-11 | 2 |
acinar cell of sebaceous gland | 3.35e-11 | 2 |
epithelial cell of alimentary canal | 1.28e-09 | 20 |
secretory cell | 3.34e-09 | 36 |
Ontology term | p-value | n |
---|---|---|
saliva-secreting gland | 2.06e-30 | 6 |
gland of oral region | 2.06e-30 | 6 |
gland of foregut | 2.06e-30 | 6 |
oral gland | 2.06e-30 | 6 |
oral cavity | 2.06e-30 | 6 |
penis | 1.88e-21 | 1 |
intromittent organ | 1.88e-21 | 1 |
lateral plate mesenchyme | 1.88e-21 | 1 |
undifferentiated genital tubercle | 1.88e-21 | 1 |
somatopleure | 1.88e-21 | 1 |
surface | 2.30e-21 | 1 |
gland of gut | 1.44e-18 | 10 |
oral opening | 8.89e-15 | 22 |
mouth | 2.64e-11 | 29 |
stomodeum | 2.64e-11 | 29 |
skin gland | 3.35e-11 | 2 |
epidermis gland | 3.35e-11 | 2 |
gland of integumental system | 3.35e-11 | 2 |
sebaceous gland | 3.35e-11 | 2 |
skin sebaceous gland | 3.35e-11 | 2 |
sweat gland | 3.35e-11 | 2 |
sweat gland placode | 3.35e-11 | 2 |
sebaceous gland placode | 3.35e-11 | 2 |
exocrine gland | 1.24e-10 | 31 |
exocrine system | 1.24e-10 | 31 |
orifice | 3.57e-09 | 36 |
tongue | 8.29e-08 | 3 |
gustatory system | 8.29e-08 | 3 |
future tongue | 8.29e-08 | 3 |
surface structure | 4.04e-07 | 99 |
subdivision of head | 8.12e-07 | 49 |