FFCP PHASE1:Hg19::chr17:38333714..38333813,+: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=51195 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=17428 | |||
|TSSclassifier=strong | |||
|UniProt= | |||
|association_with_transcript=0bp_to_ENST00000540388_5end | |||
|description=CAGE_peak_1_at_RAPGEFL1_5end | |||
|id=chr17:38333714..38333813,+ | |||
|ontology_enrichment_celltype=CL:0002076!4.25e-10!43 | |||
|ontology_enrichment_celltype_v019= | |||
|ontology_enrichment_celltype_v019_2=CL:0002076,8.55e-09,42 | |||
|ontology_enrichment_development_v019=UBERON:0006601;2.10e-10;82 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0004121!5.65e-34!169;UBERON:0000924!6.26e-33!173;UBERON:0006601!6.26e-33!173;UBERON:0003075!2.08e-27!86;UBERON:0007284!2.08e-27!86;UBERON:0000033!4.10e-27!123;UBERON:0000153!5.50e-27!129;UBERON:0007811!5.50e-27!129;UBERON:0005743!4.63e-26!86;UBERON:0002346!7.69e-26!90;UBERON:0000073!1.60e-25!94;UBERON:0001016!1.60e-25!94;UBERON:0001049!1.81e-25!57;UBERON:0005068!1.81e-25!57;UBERON:0006241!1.81e-25!57;UBERON:0007135!1.81e-25!57;UBERON:0001017!9.63e-25!82;UBERON:0003056!5.58e-24!61;UBERON:0002616!1.03e-23!59;UBERON:0000955!1.67e-22!69;UBERON:0006238!1.67e-22!69;UBERON:0003080!1.86e-20!42;UBERON:0002780!1.96e-20!41;UBERON:0001890!1.96e-20!41;UBERON:0006240!1.96e-20!41;UBERON:0007023!2.61e-20!115;UBERON:0000475!6.74e-20!365;UBERON:0001893!8.22e-18!34;UBERON:0002020!1.02e-17!34;UBERON:0003528!1.02e-17!34;UBERON:0000481!1.09e-17!347;UBERON:0001869!1.15e-17!32;UBERON:0002791!3.90e-17!33;UBERON:0000064!1.65e-16!219;UBERON:0002619!2.49e-16!22;UBERON:0001950!4.92e-15!20;UBERON:0000468!2.69e-14!659;UBERON:0000062!4.61e-14!511;UBERON:0000922!8.35e-14!612;UBERON:0000956!1.22e-13!25;UBERON:0000203!1.22e-13!25;UBERON:0000119!2.62e-13!312;UBERON:0000483!1.08e-12!309;UBERON:0002050!5.14e-12!605;UBERON:0005423!5.14e-12!605;UBERON:0000923!1.15e-11!604;UBERON:0005291!1.15e-11!604;UBERON:0006598!1.15e-11!604;UBERON:0002532!1.15e-11!604;UBERON:0000467!3.07e-11!625;UBERON:0000480!4.94e-11!626;UBERON:0000063!1.94e-10!97;UBERON:0004119!3.80e-10!169;UBERON:0000925!3.80e-10!169;UBERON:0006595!3.80e-10!169;UBERON:0001007!1.13e-08!155;UBERON:0001555!1.13e-08!155;UBERON:0007026!1.13e-08!155;UBERON:0004921!1.73e-08!129;UBERON:0004185!1.73e-08!129;UBERON:0000477!5.25e-08!286;UBERON:0004111!2.31e-07!241;UBERON:0000020!4.46e-07!23;UBERON:0001444!8.22e-07!48;UBERON:0001871!9.19e-07!7 | |||
|ontology_enrichment_uberon_v019=UBERON:0002619;1.70e-24;22!UBERON:0001869;4.87e-24;32!UBERON:0001893;9.65e-23;34!UBERON:0003528;1.18e-22;34!UBERON:0002020;1.18e-22;34!UBERON:0001950;1.82e-22;20!UBERON:0002791;2.81e-22;32!UBERON:0002780;5.08e-22;41!UBERON:0001890;5.08e-22;41!UBERON:0000956;1.61e-20;25!UBERON:0000203;1.61e-20;25!UBERON:0000073;1.90e-18;53!UBERON:0002616;1.90e-18;53!UBERON:0000955;4.46e-14;68!UBERON:0001017;1.85e-13;75!UBERON:0001016;5.33e-11;83!UBERON:0001871;1.26e-08;6!UBERON:0011216;4.42e-08;132!UBERON:0000020;4.93e-08;23!UBERON:0000200;8.53e-08;6!UBERON:0002420;1.20e-07;9!UBERON:0007245;1.20e-07;9!UBERON:0010009;1.20e-07;9!UBERON:0010011;1.20e-07;9!UBERON:0000454;1.20e-07;9!UBERON:0004921;1.38e-07;33!UBERON:0001032;1.71e-07;24!UBERON:0004456;1.71e-07;24!UBERON:0010371;1.85e-07;31!UBERON:0007023;4.51e-07;114!UBERON:0000125;6.00e-07;9!UBERON:0002308;6.00e-07;9!UBERON:0000349;7.80e-07;5 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0004121,3.25e-39,171;UBERON:0000924,3.25e-39,171;UBERON:0006601,3.25e-39,171;UBERON:0010371,6.73e-38,104;UBERON:0001049,6.14e-34,56;UBERON:0005068,6.14e-34,56;UBERON:0006241,6.14e-34,56;UBERON:0007135,6.14e-34,56;UBERON:0000073,1.70e-33,53;UBERON:0002616,1.70e-33,53;UBERON:0003075,6.49e-33,82;UBERON:0007284,6.49e-33,82;UBERON:0001017,3.92e-32,81;UBERON:0003056,9.72e-32,61;UBERON:0002346,1.92e-31,86;UBERON:0001016,5.46e-31,89;UBERON:0002780,2.91e-30,41;UBERON:0001890,2.91e-30,41;UBERON:0003080,2.91e-30,41;UBERON:0006240,2.91e-30,41;UBERON:0000955,2.66e-29,68;UBERON:0006238,2.66e-29,68;UBERON:0011216,6.74e-27,223;UBERON:0001869,8.78e-27,32;UBERON:0001893,3.61e-26,34;UBERON:0003528,5.02e-26,34;UBERON:0002020,5.02e-26,34;UBERON:0007023,5.32e-25,114;UBERON:0002791,1.46e-24,32;UBERON:0002619,1.72e-24,22;UBERON:0001950,1.78e-22,20;UBERON:0000956,1.62e-20,25;UBERON:0000203,1.62e-20,25;UBERON:0010314,2.93e-20,132;UBERON:0000922,1.84e-10,592;UBERON:0002050,4.70e-10,564;UBERON:0000923,5.57e-10,560;UBERON:0010316,5.57e-10,560;UBERON:0005291,5.57e-10,560;UBERON:0006598,5.57e-10,560;UBERON:0010317,5.57e-10,560;UBERON:0002532,5.57e-10,560;UBERON:0005423,7.84e-09,581;UBERON:0001871,1.26e-08,6;UBERON:0000200,8.40e-08,6;UBERON:0002420,1.26e-07,9;UBERON:0007245,1.26e-07,9;UBERON:0010009,1.26e-07,9;UBERON:0010011,1.26e-07,9;UBERON:0000454,1.26e-07,9;UBERON:0000119,1.57e-07,309;UBERON:0000020,3.26e-07,24;UBERON:0001032,3.26e-07,24;UBERON:0004456,3.26e-07,24;UBERON:0000483,3.29e-07,306;UBERON:0000125,5.67e-07,9;UBERON:0002308,5.67e-07,9;UBERON:0000349,8.19e-07,5 | |||
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| |||
|short_description=p1@RAPGEFL1 | |||
}} |
Revision as of 15:06, 20 January 2014
Short description: | p1@RAPGEFL1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_RAPGEFL1_5end |
Coexpression cluster: | NA |
Association with transcript: | 0bp_to_ENST00000540388_5end |
EntrezGene: | RAPGEFL1 |
HGNC: | 17428 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
endo-epithelial cell | 8.55e-09 | 42 |