FFCP PHASE1:Hg19::chr17:34900880..34900893,+: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
Line 1: | Line 1: | ||
{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=79893 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=19357 | |||
|TSSclassifier=strong | |||
|UniProt= | |||
|association_with_transcript=64bp_to_ENST00000486208_5end | |||
|description=CAGE_peak_4_at_GGNBP2_5end | |||
|id=chr17:34900880..34900893,+ | |||
|ontology_enrichment_celltype=CL:0000738!8.56e-14!140;CL:0000988!6.70e-13!182;CL:0000037!2.35e-12!172;CL:0000566!2.35e-12!172;CL:0002031!2.43e-10!124;CL:0002032!3.38e-10!165;CL:0000837!3.38e-10!165;CL:0002087!5.65e-09!119;CL:0000766!4.42e-07!76 | |||
|ontology_enrichment_celltype_v019=CL:0000081;1.23e-10;11!CL:0000791;9.54e-09;18!CL:0000789;9.54e-09;18!CL:0002419;9.54e-09;18!CL:0000094;4.68e-08;8!CL:0000840;1.72e-07;5!CL:0002393;2.41e-07;6!CL:0002397;2.41e-07;6!CL:0000766;2.51e-07;69!CL:0000624;7.03e-07;6 | |||
|ontology_enrichment_celltype_v019_2=CL:0000738,7.70e-29,136;CL:0000988,9.31e-26,177;CL:0000037,7.70e-24,168;CL:0002031,1.81e-21,120;CL:0002032,5.62e-20,161;CL:0000837,5.62e-20,161;CL:0002087,1.34e-18,115;CL:0000766,6.08e-18,72;CL:0000557,4.46e-15,67;CL:0000839,5.95e-13,66;CL:0000763,9.82e-13,108;CL:0000049,9.82e-13,108;CL:0002009,2.78e-11,61;CL:0000081,1.44e-10,11;CL:0002393,3.22e-10,9;CL:0002397,3.22e-10,9;CL:0000473,4.04e-10,48;CL:0000234,4.04e-10,48;CL:0002194,6.71e-10,59;CL:0000576,6.71e-10,59;CL:0000040,6.71e-10,59;CL:0000559,6.71e-10,59;CL:0000134,5.96e-09,354;CL:0000791,8.68e-09,18;CL:0000789,8.68e-09,18;CL:0002420,8.68e-09,18;CL:0002419,8.68e-09,18;CL:0000790,8.68e-09,18;CL:0000860,2.38e-08,42;CL:0002057,2.38e-08,42;CL:0002320,2.81e-08,361;CL:0000094,3.82e-08,8;CL:0000838,1.17e-07,52;CL:0000840,1.21e-07,5;CL:0001029,1.21e-07,5;CL:0000542,2.22e-07,53;CL:0000051,2.22e-07,53;CL:0000034,2.23e-07,441;CL:0000048,2.62e-07,427;CL:0000723,7.83e-07,433;CL:0000624,7.90e-07,6;CL:0000451,9.25e-07,10 | |||
|ontology_enrichment_development_v019=CL:0000790;9.54e-09;18 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002390!9.02e-08!102;UBERON:0003061!9.02e-08!102;UBERON:0002193!4.21e-07!112 | |||
|ontology_enrichment_uberon_v019=UBERON:0000178;4.03e-09;15!UBERON:0000179;4.03e-09;15!UBERON:0000463;4.03e-09;15 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002390,1.44e-18,98;UBERON:0003061,1.44e-18,98;UBERON:0002193,6.56e-17,108;UBERON:0002371,1.36e-13,76;UBERON:0001474,2.08e-12,82;UBERON:0002405,7.34e-11,93;UBERON:0004765,3.09e-10,90;UBERON:0000178,4.09e-09,15;UBERON:0000179,4.09e-09,15;UBERON:0000463,4.09e-09,15;UBERON:0001434,4.49e-09,100;UBERON:0002384,9.74e-08,371 | |||
|phase1_expression=1.09007027562334,0.214100523890983,1.26858963686374,0,0.446961094427288,0,0,0.631719873426831,0.261185628199839,0.245733936501509,0,0,0,0,0,1.34465029290355,0.602694528023977,0.730310090387373,0,0.246242116153576,0,0,0,0.136874425072884,0.87879847716362,0.0764134057479513,0,0.0787107813136792,4.32700704533794,4.98978217526377,3.8704030829019,0,0.90361775633475,0,1.00707360754392,0,1.46800219667424,2.76997704265939,4.61252229181326,4.34021741431704,0.895661896959697,0.647787332037959,0.77272670290256,0.290796477559129,0,1.4555043671269,0,0,4.33588919253145,0,0,2.83778675866302,0,0,1.35426486594342,0.188242339542605,0,4.26974620445661,0,0,3.19668562899521,0,0,3.40979800426155,0,0,3.73693349397345,0.502497330513487,0,4.99534342821768,0,0,3.16462387440884,1.47878700418359,2.97646019951061,4.40283155567589,2.13424399178341,3.00353785683013,3.37523732063868,1.14005097496499,5.17183360717634,3.47061892152804,0,0.546138611262131,4.44754626931777,0,0.800791974072025,1.72425731986345,2.64417949113945,1.90810750907073,3.98449078376614,7.6340834618222,5.3518251937532,3.96513985737078,5.04457706683382,1.84368859342554,4.52432471261816,2.75107533924415,2.46721798799411,1.33749196312542,2.93330039970231,6.15482147455153,0,0.111410456885174,2.3568472597987,5.09527957542329,2.70803863765016,0.512365278902701,1.8208308658383,1.15106533222573,2.48715016007264,1.15921234294021,1.63115219478266,4.28065324943541,7.31748666634838,0.679856056185397,1.14966148080576,5.49803912772208,5.06039384039006,2.22995790026868,1.95325036156926,4.75226022224187,0.301150238155546,0.127986611154418,0,0.947109008176067,3.28451198768419,3.83052812126992,4.27904313253612,3.04131248153878,4.87613732627923,1.34140171940727,0.12786256184353,0.361439152384566,0,0.144846518960824,0.795285947051099,0.486634870302636,0.378139268656271,1.77383517970051,1.31752178539689,0.72038491523742,0,0,1.62273696827342,2.96020553408754,2.39324328933957,13.1169843367938,7.43593384014166,7.05769252526173,0.39752481473341,0,0.347140501607594,0.56530794192401,0,0,0.208994966536811,0.258416759169329,0.35576626268671,1.33888245105868,0.402829317109147,0,0.732186172644509,0.367663080345869,0,0.803697554556718,1.34717623575702,0.337834441449967,0,0,0.732806975721629,3.9534125230819,3.87780264148325,0.872188104285069,1.49091585508596,0,1.32409180813219,1.14734648299525,0.354668382198357,0.560677600142307,0,0.74000264525148,0,0.404132016209064,0,0.302714855289863,0,0,0,0,0.448346041655403,0,0,0,0.204154171254893,0,0,0,0,0,0,1.0100166837244,0.500474079487857,0,0.438977620880838,0,0.150238058906597,0.226864366320042,0.538168907066586,0,0,0,0,0.772921620136887,0,0.168776332241266,0,0.757301322732344,0.828449087780694,2.42469085228218,2.84007674013291,1.41052937518696,0.508681776931463,0,0,0.573609190778008,0,0.265059536642971,0.116193942869518,0.414644220061482,0.504641701751257,0.36497735907583,0,0.643240938192885,0,0,0.721879481669586,0,0.168584690078102,0.241011029883482,0.220587945464788,0.217879444092406,0,0,0,0,1.4763109092493,0,0.4115740113314,0,0,0,0,0.441463099414651,0.245976877086227,0.857839051492628,0.439001141634502,0,0.100528972411631,0.462942225792648,0.325808305310325,0,0,0.463721619900307,0.587043471179108,0.433099343283221,0,0.190254152234598,0,4.29243081047436,0.246217006087397,3.97807250736704,1.63494278517601,0,0.335964256397719,0,0.179117045405697,1.16253575405585,0.383382679165211,9.85326475791887,2.99364675644969,1.65862492432618,1.29707958075265,1.38866676769018,1.07946420296687,0,1.17217447210047,0,0.822619941626588,0,0,0.784917590417525,0.43596006883328,0.95339771567235,0.646358578788889,0,0.845302752556,0,0,0.514414748524284,0,0,0,0,0,0.65147236858747,0,0,0.904318131178758,1.74306691720059,0.099972991182057,2.43247561282381,2.51128545716063,0,2.15662369942424,1.14861935834114,0,0.434343920002738,0.205476322550383,1.61154866915906,0.448340575974109,4.53170748464433,3.45004119775228,2.69520376187472,3.30323011489202,1.30139853857622,0,0.167516265334349,0,5.99205619157746,0,10.7748033493369,0,0,0,0,0.535286966391485,0.315404830067869,0.35142424497814,1.20378439891088,0,1.03473071292505,0.664225598535437,0.921845842708516,0.695068915744663,0,0.686286847621712,5.16920065307218,5.60856922128404,2.56146138728266,0,0,0,0.744323423456331,1.07423381301644,0.280660094433074,1.28139149255701,1.53512174720011,0.321707842287215,0,0.925258162815933,1.24293207719189,0.410635780069046,0,1.04589340613963,0.604297247958111,0,0.0920809889358963,0.459257792658427,0.182091168006717,0.655622074797121,0,0.0770153371044148,0,0,0.316654886678627,0,0.170093705276516,0,0,0,0,0.509752546090077,0,0.223874754722178,1.31555925987561,0.522870902049801,0.256450125116389,0,0,0.515205058238611,0.0915694648183434,0,0.574265537996172,0,1.6068392984416,0.193341436584244,0.616194468458578,0.15350367472613,0,0.859361958946189,0.290033387828457,0.0852266274161009,1.4245125703478,0,0.768760269460425,1.78657797492418,0.30347334256665,0,0,0,0.924100740528266,0,0,0,0.286249773483982,2.232950216158,0.949138274156178,0,0,0.42793898803392,0.95460974377781,0,1.43897966066652,0,0,0.404364963146632,0,0,0.48763373908959,0.731140468893853,0,0.409499734223957,0.141405431953713,0,1.10273068709225,0.66343897524122,0.438450885253763,1.73632660280006,0,0.202910376962704,0.6196469961995,0.281695602532241,0.143411352204052,0.196498082026242,0.35667105148125,0,1.05553817648832,0.329294892959902,0,0,0,0,0,0,0,0,0,0,2.53723804616085,2.29391162142713,1.13929437434833,0,0.411362273086194,2.59389324477087,1.08006287447623,3.96562588147135,0.320472213382419,0,0.245040215981032,0.743212700502875,0,0,0.956557636372934,0,0,0,0.649243880549111,0.280797178113459,0.912938716132769,0.47003968731907,5.01268954180134,0,0,0.201799707191048,0.425846237690326,0,0.307240764308458,0.223676107892416,0.166849141711909,0,0.278406173895242,0,0.270455678475983,0,0,0.561421621224659,0.73254089635947,0.36408156524854,0.66866030566487,1.13654458722565,0,0.296964680832639,0,0.994147647766298,1.68803299692615,0,0.329607748453519,0.844501632511974,0.398495976502139,1.38141957765574,0.251932747854276,0,0.246169610922139,0.622079175323615,0,0.716084698702437,0.511572370226872,0.789147245095469,0,0,0,1.02044907978036,0,0.520855522170466,1.13697999995054,0,0.1137934482855,0.762760950878299,0.709163045303809,0,0,0,0,1.5677537021303,1.52581736317083,0.442317039724898,0.886642856860642,0.219385397153973,0,0.139423744278603,0.230850775511391,0,0,0.269272933229316,0,0,0.732780747214898,0,0,0.627921025580099,0.332423363800313,1.57916962432026,0.980312671588698,0.671286347903371,0.37950746544837,2.06617552674492,0.632994193584081,0.816164040795739,0.282706142867882,0,0,0.530745387020035,0.611030144933625,4.44781693020933,1.97702302314405,2.61054873763638,0.337005664903385,0.802577647298789,0.468528891450678,0.182454789215666,0,0,0,0,0.61214552326098,2.0851571277401,0.150323419414493,0.103688191397247,0,0.330991955875499,0.313932918407225,0,2.56148591426813,0,0,0.979923974143776,0,0.34945333648406,0.171986032471617,0,0.0730893170861856,0.164230914106418,0.193978032976839,1.1473296469895,0.225980740780532,0.685209623233754,0,0.379864775735272,0,0.160317640503067,0.213452994739353,0.19980960958213,0.864542502924636,0.114536596165916,1.02956998717179,0.720273989940749,0,0.942776138467182,0,0.627617077873999,0.713987523454252,0,0.600420288709789,1.36905378891993,3.83239764200917,1.71906176567983,0.788662062837943,2.51354161145029,0.229160424011684,0,0.199679000498991,1.28767814440971,1.11585728720936,0.470284307407084,1.08089965062721,0,0.393915911536118,1.15382201733633,0.606631894687664,1.37798474120648,0.0846733320657845,1.59045937961861,0.953423842781029,0.482259445395058,0,0,7.42413842119952,3.0952078182318,1.03274246318642,0,0.709251365692784,0.472091293214983,1.05600336519407,0.537862017998534,0,1.42939065274673,0,0.76280561296425,0,0.864221491201268,0.326587360109409,0,0.574647645245373,0.340776043570843,0,0.293104467356165,1.32506888912221,0.387848869084652,0.52893040697076,0.171086837884329,0,0.427149650270779,0.471612915298998,0.414239055347196,1.48849806543585,0.197611631897944,0,0,0.544017803369474,0,2.14441903734423,0.655745261419609,0,0.886068179966986,1.58634144372552,2.50381861413,0,0.554645257684261,0.869349641179368,0.276697269872462,0,0.303298235083296,1.14186133417987,0.235265819698172,0,0.434763085832475,0.298509605773748,1.40227985908335,0,1.7046270474758,0,0.889811221596536,0.457680136793847,0.756154618816195,0.777186002913902,0.295710299979268,0,0.899606224327209,0.465788870628778,0,0,1.04349012362347,0.751288044986092,0.761610424337591,0,0.363697318405119,1.18151612746737,0.928067519756987,0,0.400027764663154,0.686791410365586,0,1.26184898228651,0,0.857766365499703,0,1.13352962756136,0,0,0.358177682162975,0.308801447160972,0,0.353378291891762,0.192914038270915,0,0.512483037175893,0,0.607719912354764,1.24432592536558,0,0.265729680626726,0,0,0.491545817507439,0.211312123358627,0.39997479170986,0.320075189082423,0,0,0.368211900503681,0.139879507719444,0,0.127894371303652,0.215649622793364,0,0.764467467344097,0.848662649770126,0.425149840203366,1.11542187833102,0,0.636008701306837,0,0.80057074828547,0,0.918736432059601,1.34881372702565,0,0.638535436228605,0.205116364240755,0,0.484100767249525,0.968853873791107,0,0,0,1.10057159113007,0,0.381382095467167,0,0.994581110581374,0.0752103283492573,0.80682027481408,0.781514011233092,0.785720083444267,0.49131575253029,0,0.810451015420736,0.781078098613847,1.86018116851066,0.824405532520789,0,0,0.496211178389294,0,0.383287282918786,1.07140367175657,0.336283722218824,1.82089681270989,0.682986574053893,0.354809480650555,0.921871900446234,0.857440047187092,1.22345519358297,0.789273282754189,0.827356886187777,0.111231401892069,0.235479278551542,1.09980912941201,0.560544326627578,0,0.431855182437243,0,0.357382720883282,0,0,0.695433089210318,0.801711364730253,0,0.6828739083758,1.38251932362818,1.29068207646083,0.236664001461131,0.596493833314104,0,0,3.1020638566432,0.955538938977433,0,0,0.731507549893617,0,0.513314034281235,0,0.971421986118279,0.233939463462106,0.397901550322736,0,0,0,0,0.540219106755613,0,0,0,2.12108892391463,0.588925401344836,0.891139200981258,0.4226557275834,0.509781344063451,0,0.837952543656503,0,0.357107877211315,0,0.0802413666891683,0,0,0.573358332605805,0,0.543931921527318,0.436350690340377,0.5290268405154,0.371995018166751,0.462175628631418,0.865253124247578,0.252332849670158,0,0.380095503034311,1.22386595690378,0,1.01084389488329,0,0.757786982182394,0.535928260312357,0,0.827463966895162,0.426467963801962,0.23806443146374,0.322944549180031,0.806971285846153,0.560659312903067,0.318235791390825,0.202117188958219,0,0,0.5388164241167,0.573777643141411,0,0,0,0,0.0898252021065869,0,0.366724332548599,0.406896178315738,0,0,1.28227396921293 | |||
|short_description=p4@GGNBP2 | |||
}} |
Revision as of 14:50, 20 January 2014
Short description: | p4@GGNBP2 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_4_at_GGNBP2_5end |
Coexpression cluster: | NA |
Association with transcript: | 64bp_to_ENST00000486208_5end |
EntrezGene: | GGNBP2 |
HGNC: | 19357 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
hematopoietic system | 1.44e-18 | 98 |
blood island | 1.44e-18 | 98 |
hemolymphoid system | 6.56e-17 | 108 |
bone marrow | 1.36e-13 | 76 |
bone element | 2.08e-12 | 82 |
immune system | 7.34e-11 | 93 |
skeletal element | 3.09e-10 | 90 |
blood | 4.09e-09 | 15 |
haemolymphatic fluid | 4.09e-09 | 15 |
organism substance | 4.09e-09 | 15 |
skeletal system | 4.49e-09 | 100 |
connective tissue | 9.74e-08 | 371 |