FFCP PHASE1:Hg19::chr16:62070523..62070533,+: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |||
|TSSclassifier=weak | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|coexpression_cluster_id=C63 | |||
|description=CAGE_peak_at_chr16:62070523..62070533,+ | |||
|id=chr16:62070523..62070533,+ | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019=CL:0000222;5.16e-21;1 | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease=DOID:171!4.14e-14!10 | |||
|ontology_enrichment_disease_v019=DOID:171;3.67e-32;10!DOID:3095;6.91e-15;22!DOID:2994;6.91e-15;22!DOID:3193;3.34e-11;2!DOID:962;3.34e-11;2!DOID:1192;6.78e-08;3 | |||
|ontology_enrichment_disease_v019_2=DOID:171,3.13e-32,10;DOID:3095,6.43e-15,22;DOID:2994,6.43e-15,22;DOID:3193,2.73e-11,2;DOID:962,2.73e-11,2;DOID:1192,5.93e-08,3 | |||
|ontology_enrichment_uberon=UBERON:0001869!5.69e-50!32;UBERON:0001893!8.62e-47!34;UBERON:0002020!8.82e-47!34;UBERON:0003528!8.82e-47!34;UBERON:0002791!5.74e-44!33;UBERON:0000956!1.61e-42!25;UBERON:0000203!1.61e-42!25;UBERON:0001049!3.85e-40!57;UBERON:0005068!3.85e-40!57;UBERON:0006241!3.85e-40!57;UBERON:0007135!3.85e-40!57;UBERON:0002346!8.79e-40!90;UBERON:0002616!1.42e-38!59;UBERON:0002619!3.70e-38!22;UBERON:0002780!4.77e-38!41;UBERON:0001890!4.77e-38!41;UBERON:0006240!4.77e-38!41;UBERON:0003080!4.95e-37!42;UBERON:0000955!2.98e-34!69;UBERON:0006238!2.98e-34!69;UBERON:0001017!9.17e-33!82;UBERON:0000073!5.47e-32!94;UBERON:0001016!5.47e-32!94;UBERON:0001950!9.48e-32!20;UBERON:0003075!2.77e-31!86;UBERON:0007284!2.77e-31!86;UBERON:0005743!6.19e-31!86;UBERON:0003056!4.23e-29!61;UBERON:0000924!2.72e-22!173;UBERON:0006601!2.72e-22!173;UBERON:0000033!4.27e-21!123;UBERON:0000153!8.75e-20!129;UBERON:0007811!8.75e-20!129;UBERON:0000349!1.58e-19!5;UBERON:0004121!3.67e-17!169;UBERON:0001871!1.23e-16!7;UBERON:0007023!5.45e-14!115;UBERON:0002021!2.11e-12!5;UBERON:0002420!1.06e-10!9;UBERON:0007245!1.06e-10!9;UBERON:0010009!1.06e-10!9;UBERON:0010011!1.06e-10!9;UBERON:0000454!1.06e-10!9;UBERON:0000200!8.87e-10!6;UBERON:0000369!1.45e-09!4;UBERON:0002435!1.45e-09!4;UBERON:0000204!1.45e-09!4;UBERON:0010082!1.45e-09!4;UBERON:0001954!6.09e-09!2;UBERON:0003022!6.09e-09!2;UBERON:0002421!6.09e-09!2;UBERON:0002600!6.09e-09!2;UBERON:0001876!1.27e-08!2;UBERON:0000025!2.06e-07!194;UBERON:0000064!2.65e-07!219;UBERON:0002298!2.87e-07!8;UBERON:0004733!3.66e-07!12;UBERON:0002028!3.66e-07!12;UBERON:0007277!3.66e-07!12;UBERON:0002308!5.04e-07!9;UBERON:0000125!5.04e-07!9 | |||
|ontology_enrichment_uberon_v019=UBERON:0002346;1.97e-45;4!UBERON:0000923;1.97e-45;4!UBERON:0010316;1.97e-45;4!UBERON:0005291;1.97e-45;4!UBERON:0002050;1.57e-36;5!UBERON:0005423;1.57e-36;5!UBERON:0001954;3.34e-11;2!UBERON:0003714;3.34e-11;2!UBERON:0003022;3.34e-11;2!UBERON:0002421;3.34e-11;2!UBERON:0002600;3.34e-11;2!UBERON:0000922;1.34e-08;49!UBERON:0002114;6.78e-08;2 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0003714,2.73e-11,2;UBERON:0001954,3.02e-11,2;UBERON:0003022,3.02e-11,2;UBERON:0002421,3.02e-11,2;UBERON:0002600,3.02e-11,2;UBERON:0002114,7.26e-08,2 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.123121058076788,0,0,0,0.684372125364421,0.125542639594803,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.19891667719909,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.443458794925128,0.263504357079378,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.18611685633159,0,0,0,0,0,0,0.10075209822764,0,0,0,0,0,0,0,0.207322110030741,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.12624243342638,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.27587750330633,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.994147647766298,0.140669416410513,0,0,0,0,0,0,0,0.246169610922139,0,0,0,0,0,0,0,0,0.371072392647405,0,0,0,0,0,0,0,0,0.583209226766509,0,0,0.723578631752448,0,0,0,0.438770794307945,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.296521128680622,0.247127877893006,0,0,0,0,0,0,0,0,0,0.61214552326098,0,0,0.103688191397247,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.225980740780532,0,0,0.253243183823515,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.59045937961861,0.272406812223151,0,0,0,0,0,0.242998226632099,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.13223260174269,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.488105059607853,0.1251909307065,0,0.110929051536852,0.0620964029413835,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.800055529326307,0,0,1.26184898228651,0,0,1.82696004375648,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.943595651135378,0,1.3578602396322,8.07784696386395,11.5260260760872,1.67593475391973,0,0,0,0,0,0.834979926253974,0,0.159633859057151,0.41023272848151,2.01657356977374,0.138314504928436,0.161475645631851,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.135075169236789,0,0,0.19024743058172,0,0,0,0.175871244359621,0,0,0,0,0,0,0,0,0.339848664884159,0.0657727735628491,0,0,0,0.471346769748006,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.339957450954573,1.30905207102113,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0 | |||
|short_description=p@chr16:62070523..62070533,+ | |||
}} |
Revision as of 11:46, 20 January 2014
Short description: | p@chr16:62070523..62070533, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | No |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr16:62070523..62070533, + |
Coexpression cluster: | C63_neuroectodermal_neuroblastoma_carcinoid_peripheral_chronic_neuroepithelioma_acute |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
neural tissue | 2.73e-11 | 2 |
Ammon's horn | 3.02e-11 | 2 |
lobe parts of cerebral cortex | 3.02e-11 | 2 |
hippocampal formation | 3.02e-11 | 2 |
limbic lobe | 3.02e-11 | 2 |
duodenum | 7.26e-08 | 2 |
Ontology term | p-value | n |
---|---|---|
neuroectodermal tumor | 3.13e-32 | 10 |
germ cell and embryonal cancer | 6.43e-15 | 22 |
germ cell cancer | 6.43e-15 | 22 |
peripheral nerve sheath neoplasm | 2.73e-11 | 2 |
neurofibroma | 2.73e-11 | 2 |
peripheral nervous system neoplasm | 5.93e-08 | 3 |