FFCP PHASE1:Hg19::chr16:23846966..23846987,+: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=5579 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=9395 | |||
|TSSclassifier=weak | |||
|UniProt=P05771 | |||
|association_with_transcript=-312bp_to_NM_002738,NM_212535,uc002dmd.2,uc002dme.2_5end | |||
|coexpression_cluster_id=C3 | |||
|description=CAGE_peak_7_at_PRKCB_5end | |||
|id=chr16:23846966..23846987,+ | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019=CL:0002032;3.40e-08;1!CL:0000557;3.40e-08;1 | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_development_v019=UBERON:0006601;6.06e-11;82!UBERON:0006215;4.19e-10;3 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001049!1.60e-65!57;UBERON:0005068!1.60e-65!57;UBERON:0006241!1.60e-65!57;UBERON:0007135!1.60e-65!57;UBERON:0001893!5.14e-60!34;UBERON:0002616!1.32e-59!59;UBERON:0002020!1.56e-59!34;UBERON:0003528!1.56e-59!34;UBERON:0000955!7.33e-58!69;UBERON:0006238!7.33e-58!69;UBERON:0002791!1.89e-57!33;UBERON:0001869!1.14e-55!32;UBERON:0002619!2.89e-55!22;UBERON:0001017!2.12e-52!82;UBERON:0002780!3.81e-52!41;UBERON:0001890!3.81e-52!41;UBERON:0006240!3.81e-52!41;UBERON:0005743!7.22e-52!86;UBERON:0002346!1.86e-51!90;UBERON:0003080!1.01e-50!42;UBERON:0001950!2.24e-50!20;UBERON:0000073!3.97e-48!94;UBERON:0001016!3.97e-48!94;UBERON:0000956!4.17e-48!25;UBERON:0000203!4.17e-48!25;UBERON:0003075!1.47e-44!86;UBERON:0007284!1.47e-44!86;UBERON:0007023!1.08e-35!115;UBERON:0003056!1.02e-34!61;UBERON:0000033!3.02e-34!123;UBERON:0000153!1.14e-33!129;UBERON:0007811!1.14e-33!129;UBERON:0000924!4.58e-27!173;UBERON:0006601!4.58e-27!173;UBERON:0004121!8.79e-23!169;UBERON:0000200!4.47e-17!6;UBERON:0001871!6.26e-17!7;UBERON:0004733!6.51e-16!12;UBERON:0002028!6.51e-16!12;UBERON:0007277!6.51e-16!12;UBERON:0003076!2.51e-15!15;UBERON:0003057!2.51e-15!15;UBERON:0002298!1.05e-14!8;UBERON:0004732!1.50e-14!13;UBERON:0002021!2.01e-14!5;UBERON:0001872!2.30e-14!5;UBERON:0000349!4.28e-14!5;UBERON:0002420!1.62e-13!9;UBERON:0007245!1.62e-13!9;UBERON:0010009!1.62e-13!9;UBERON:0010011!1.62e-13!9;UBERON:0000454!1.62e-13!9;UBERON:0002308!7.30e-13!9;UBERON:0000125!7.30e-13!9;UBERON:0000025!1.42e-12!194;UBERON:0000369!1.34e-10!4;UBERON:0002435!1.34e-10!4;UBERON:0000204!1.34e-10!4;UBERON:0010082!1.34e-10!4;UBERON:0002680!6.73e-10!9;UBERON:0001895!6.73e-10!9;UBERON:0010092!6.73e-10!9;UBERON:0000064!7.51e-10!219;UBERON:0002771!3.96e-09!3;UBERON:0009663!6.45e-09!7;UBERON:0004111!8.91e-09!241;UBERON:0000988!2.57e-08!3;UBERON:0001896!2.64e-08!3;UBERON:0005290!2.64e-08!3;UBERON:0010096!2.64e-08!3;UBERON:0005383!4.39e-08!3;UBERON:0005382!4.39e-08!3;UBERON:0006331!6.23e-08!3;UBERON:0001870!5.48e-07!2;UBERON:0000477!6.35e-07!286;UBERON:0001876!8.83e-07!2 | |||
|ontology_enrichment_uberon_v019=UBERON:0002619;2.37e-87;22!UBERON:0001950;5.76e-85;20!UBERON:0000956;6.45e-77;25!UBERON:0000203;6.45e-77;25!UBERON:0001869;1.15e-68;32!UBERON:0001893;3.14e-63;34!UBERON:0002791;7.06e-61;32!UBERON:0003528;9.13e-56;34!UBERON:0002020;9.13e-56;34!UBERON:0002780;3.12e-40;41!UBERON:0001890;3.12e-40;41!UBERON:0000073;4.57e-30;53!UBERON:0002616;4.57e-30;53!UBERON:0000200;5.86e-30;6!UBERON:0000955;7.13e-29;68!UBERON:0001017;9.82e-25;75!UBERON:0002021;2.02e-23;5!UBERON:0001872;5.68e-23;5!UBERON:0001870;2.91e-22;3!UBERON:0001016;1.45e-19;83!UBERON:0001871;3.71e-17;6!UBERON:0002702;2.99e-15;2!UBERON:0000349;1.47e-13;5!UBERON:0011216;5.65e-09;132!UBERON:0002022;6.03e-09;1!UBERON:0002581;9.11e-09;1!UBERON:0002902;9.11e-09;1!UBERON:0009899;9.11e-09;1!UBERON:0007023;1.21e-08;114!UBERON:0001882;1.91e-08;1!UBERON:0007190;1.91e-08;1!UBERON:0005403;1.91e-08;1!UBERON:0003112;3.40e-08;1!UBERON:0011158;3.40e-08;1!UBERON:0003128;3.40e-08;1!UBERON:0001703;3.40e-08;1!UBERON:0002241;3.40e-08;1 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002619,2.52e-87,22;UBERON:0001950,5.96e-85,20;UBERON:0000956,6.81e-77,25;UBERON:0000203,6.81e-77,25;UBERON:0001869,4.09e-75,32;UBERON:0001893,1.26e-70,34;UBERON:0002791,2.96e-67,32;UBERON:0003528,3.18e-63,34;UBERON:0002020,3.18e-63,34;UBERON:0002780,2.80e-58,41;UBERON:0001890,2.80e-58,41;UBERON:0003080,2.80e-58,41;UBERON:0006240,2.80e-58,41;UBERON:0000955,6.35e-55,68;UBERON:0006238,6.35e-55,68;UBERON:0000073,1.16e-54,53;UBERON:0002616,1.16e-54,53;UBERON:0001049,1.37e-51,56;UBERON:0005068,1.37e-51,56;UBERON:0006241,1.37e-51,56;UBERON:0007135,1.37e-51,56;UBERON:0001017,6.26e-50,81;UBERON:0001016,1.22e-44,89;UBERON:0003056,2.39e-38,61;UBERON:0003075,3.08e-34,82;UBERON:0007284,3.08e-34,82;UBERON:0002346,1.74e-32,86;UBERON:0000200,4.76e-30,6;UBERON:0010371,2.96e-26,104;UBERON:0007023,7.19e-24,114;UBERON:0002021,2.70e-23,5;UBERON:0001872,3.81e-23,5;UBERON:0001870,3.76e-22,3;UBERON:0010314,4.73e-22,132;UBERON:0004121,1.34e-21,171;UBERON:0000924,1.34e-21,171;UBERON:0006601,1.34e-21,171;UBERON:0011216,1.08e-18,223;UBERON:0001871,3.57e-17,6;UBERON:0002702,3.22e-15,2;UBERON:0000349,1.38e-13,5;UBERON:0000025,1.73e-12,192;UBERON:0004111,3.31e-09,240;UBERON:0002022,6.03e-09,1;UBERON:0002581,7.01e-09,1;UBERON:0002902,1.18e-08,1;UBERON:0009899,1.18e-08,1;UBERON:0007190,1.59e-08,1;UBERON:0001882,2.29e-08,1;UBERON:0005403,2.29e-08,1;UBERON:0003112,3.53e-08,1;UBERON:0011158,3.53e-08,1;UBERON:0003128,3.53e-08,1;UBERON:0001703,3.53e-08,1;UBERON:0002241,3.53e-08,1;UBERON:0004761,3.53e-08,1;UBERON:0009617,3.53e-08,1 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.123121058076788,0,0,0,0,0,0,0.0821005894499457,0,0,0,0,0,0,0,0,0,0,0,0.200544447470142,0,0,0,0,0,0,0.485168122375632,0,0,0.309706370895104,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.205601498999509,0,0,0,0,0,0,0,0,0,0,0,0.276350017785848,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.261958150995425,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.207328115540772,0,0.25248486685276,0,0,0,0,0,0,0.285826432630578,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.106727557803444,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.103041011647722,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.169291777801603,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.97659059106519,0.844016498463076,0,0,0,0,0.276283915531148,0,0,0,0,0,0,0,0,0,0,2.90799823828566,2.31920245404628,5.98841394003583,0,0,0,0,0,0,0,0.291604613383254,0,0.885741385813839,0.120596438625408,0,1.76926815889959,1.47773809476774,3.72955175161753,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.189753732724185,0,0,0,0,0,0,0,0,0,0,0,0.337005664903385,0,0.468528891450678,0,0,0,0,0,3.0607276163049,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0969890164884194,0,0.451961481561065,0,0,3.22885059374981,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.27746588066972,0,0,0,0,0,0,0,0,0.134366944973453,0,0,0,0,0,0,0,2.38568906942791,0.408610218334727,0,0,0,0.449947783103001,0,4.1917194094037,0,0,0,0,0,0,0,0,0,0,0,0,0,0.492555124496034,0,0,0,0,0.129282956361551,0.39669780522807,0,0,0,0,0,0,0,0,0,0,0,0,0,0.157054096250234,3.54427271986794,3.41673541725497,1.3771002377715,0.573409195690071,0.110929051536852,0.496771223531068,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.691292180758654,0,0,0,0,0,0,0,0.106691729694141,0,0,0,0,0,0,0,0.157265941855896,0,0.169732529954025,0.425149840203366,0.123935764259002,0,0,0,0,0,0,2.18379365327962,2.8339315265117,0.798169295285756,2.05116364240755,3.52900374710405,3.1120763608898,1.45328081068666,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.76904096935418,1.56215619722769,0.826747186004736,2.53663240775627,2.7348740450911,0,0,0.351742488719241,0,0,0,0,0,0,0,0,0.951576261675644,3.81482086664525,0,0,0,0.157115589916002,0,0,0,0,0.142953088353313,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.4226557275834,0,0,0,0,0,0,0,0,0,0.143339583151451,0,3.80752345069122,2.18175345170189,0,0,0,0,0,0,0,0,0,0,0,0.0757786982182394,0,0,0,0,0,0.0645889098360061,0,0,0,0,0,0,0.0673520530145875,0,0,0,0,0,0,0,0,0,0,0,0 | |||
|short_description=p7@PRKCB | |||
}} |
Revision as of 02:47, 12 January 2014
Short description: | p7@PRKCB |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | No |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_7_at_PRKCB_5end |
Coexpression cluster: | C3_occipital_temporal_insula_medial_postcentral_frontal_amygdala |
Association with transcript: | -312bp_to_NM_002738, NM_212535, uc002dmd.2, uc002dme.2_5end |
EntrezGene: | PRKCB |
HGNC: | 9395 |
UniProt: | P05771 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data