FFCP PHASE1:Hg19::chr16:11810960..11810964,-: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport= | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |||
|TSSclassifier=not | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|coexpression_cluster_id=C474 | |||
|description=CAGE_peak_at_chr16:11810960..11810964,- | |||
|id=chr16:11810960..11810964,- | |||
|ontology_enrichment_celltype=CL:0000738!5.03e-13!140;CL:0002087!5.39e-11!119;CL:0000037!3.65e-10!172;CL:0000566!3.65e-10!172;CL:0000988!1.21e-09!182;CL:0002031!2.52e-09!124;CL:0002032!3.60e-09!165;CL:0000837!3.60e-09!165;CL:0000542!8.18e-08!53;CL:0000051!8.18e-08!53;CL:0000838!1.26e-07!52;CL:0000860!5.94e-07!45 | |||
|ontology_enrichment_celltype_v019=CL:0000624;3.39e-12;6!CL:0000623;1.14e-11;3!CL:0000791;1.21e-10;18!CL:0000789;1.21e-10;18!CL:0002419;1.21e-10;18!CL:0000084;1.31e-07;25 | |||
|ontology_enrichment_celltype_v019_2=CL:0000738,3.20e-13,136;CL:0000624,2.41e-12,6;CL:0002087,3.03e-12,115;CL:0000623,1.09e-11,3;CL:0000825,1.09e-11,3;CL:0000037,1.47e-11,168;CL:0000988,8.34e-11,177;CL:0000791,9.34e-11,18;CL:0000789,9.34e-11,18;CL:0002420,9.34e-11,18;CL:0002419,9.34e-11,18;CL:0000790,9.34e-11,18;CL:0002032,1.14e-10,161;CL:0000837,1.14e-10,161;CL:0002031,5.89e-10,120;CL:0000860,4.15e-08,42;CL:0002057,4.15e-08,42;CL:0000084,1.10e-07,25;CL:0000827,1.10e-07,25;CL:0000766,3.72e-07,72;CL:0000473,5.37e-07,48;CL:0000234,5.37e-07,48 | |||
|ontology_enrichment_development_v019=CL:0000790;1.21e-10;18!UBERON:0001045;5.97e-09;1!CL:0002057;6.56e-07;42 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon= | |||
|ontology_enrichment_uberon_v019=UBERON:0001154;5.97e-09;1!UBERON:0001153;5.97e-09;1!UBERON:0009854;5.97e-09;1 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001154,9.17e-09,1;UBERON:0001153,9.17e-09,1;UBERON:0001045,9.17e-09,1 | |||
|phase1_expression=0.181678379270557,0.214100523890983,0,0,0,0,0,0,0,0,0,0,0.263766978228454,0,0,0,0,0,0,0,0,0,0,0.410623275218653,0.125542639594803,0.305653622991805,0.656804715599566,0.236132343941038,0.393364276848904,0.767658796194425,0.928896739896456,0,0,0,0.154934401160603,0.426507697462265,0.293600439334847,0,2.60707781711184,0.868043482863407,0.223915474239924,0,0,0.581592955118259,0,0,1.39457422143411,0,0,0,1.0246428261164,0,0,0.645484683583826,1.35426486594342,0.376484679085209,0.545812300115692,0,0.306083892370903,0.320929027076094,0.639337125799041,0,0.199463657621632,0.426224750532694,0.580418477257168,0,0,1.00499466102697,1.0429658368404,0,0,0,0,0.845021145247767,0.425208599930087,0.419317291016752,0.786300418025466,0.300353785683013,0.32145117339416,1.99508920618874,0.99458338599545,0.730656615058536,0,0.546138611262131,0,0.853460445133014,0,0.574752439954483,0,0,0.569212969109448,0,0.382273228125229,0,0.560508562981536,0.263384084775077,1.7703879310245,2.75107533924415,1.23360899399706,0,0,0,0,0,0.883817722424512,0.443067789167242,0,0.512365278902701,1.1705341280389,0.493313713811028,1.10540007114339,0,0,0.802622484269139,0,0.226618685395132,0.383220493601921,0.34362744548263,0.253019692019503,0,0.651083453856419,0.950452044448374,0,0,0,0,0,0.80642697289893,2.13952156626806,1.59306844271079,0,0,0,0.361439152384566,0,0,0,0,0,0.221729397462564,0,0.130979075497713,0,0,0,0,0.132957960518865,0.476981248610684,0,0,0,0,0,0,0.419499436209906,0,0,0.258416759169329,0,0,0,0,0,0,0,0.0892997282840798,0,0,0,0,0,1.31780417436063,0,0,0,0,0,0.860509862246441,0.354668382198357,0,0,0,0.311211035399766,0.134710672069688,0.163461903113459,0,0,0.234321431833797,0,0,0.149448680551801,0.117434498643765,0,0,0,0.368502951935304,0,0,0.247266929278557,0,0,0,0.250237039743928,0,0,0.30648779579902,0,0,0,0,0,0.300091096084402,0,0,0,0.168776332241266,0,0,0,0,0,0,0.169560592310488,0,0,0,0,0,0.116193942869518,0,0,0,0,0,0,0,0,0,0.168584690078102,0,0,0.217879444092406,0,0,0,0,0,0,0,0,2.53510069643662,0.982827216677626,0,0.441463099414651,0.122988438543114,0.171567810298526,0.109750285408626,0,0,0,0,0,0,0,0,0,0,0.190254152234598,0,0,0.246217006087397,0,0,0,0,0,0,0,0,0,0.44024217006613,0,0.576479813667846,0.37872730027914,0.126995788584338,0,0,0,0.102827492703324,0,0.285826432630578,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.205476322550383,0,0.224170287987055,0.985153801009636,2.58753089831421,2.56686072559497,0.254094624222463,0,0,0,0,0.749007023947182,8.97484377612075,0,0,0,0,0.207970861530807,0.178428988797162,0,0.117141414992713,0,0,0,0,0,0.173767228936166,0,0,0.82707210449155,2.37285620900479,0.106727557803444,0,0,0,0,0.306923946576125,0,0,0,0,0,0,0,0.0821271560138091,0,0,0.120859449591622,0,0,0,0.182091168006717,0.131124414959424,0,0,0,0,0.105551628892876,0,0,0,0,0,0,0.254876273045038,0,0,0,0,0,0,0,0.206082023295445,0.183138929636687,0.082509499920588,0,0,0,0.096670718292122,0,0.460511024178389,0,0.107420244868274,0.435050081742686,0,0,0.165284915360978,0,0.382838137483752,0,0,0.62962469366128,0,0,0,0,0,0,0,0.316379424718726,0.38126038784765,0,0,0,0,0,0.274537029736055,0.117812402345686,0,1.58510321173008,0,0,0,0,0.272999822815972,0.141405431953713,0,0,0,0.438450885253763,0,0,0,0.30982349809975,0,0,0.0982490410131212,0,0,0,0.329294892959902,0,0,0,0,0,0.188287601553558,0,0,0,0,0,0,0.569647187174163,0.238231775457789,0,0,0,0.79312517629427,0.106824071127473,0,0.980160863924127,0.185803175125719,0.144269212976445,0.142283686696828,0,0.199579371432817,0,0.846694330895531,0,0,0,0,0,0,0,0.403599414382095,0,0,0,0,0,0,0,0,0,0,1.4098700508785,0,0,0,0.111443384277478,0.284136146806413,0,0.296964680832639,0,0,0.140669416410513,0.222617410045812,0,0.63337622438398,0.597743964753209,1.10513566212459,0,0,0.861593638227486,0,0,0.358042349351218,0,0,0,0,0,0.185536196323703,0,0,0,0,0.1137934482855,0,0.236387681767936,0,0.291604613383254,0.347249989866585,0,0.723578631752448,0,0.331737779793674,0.295547618953547,0,0.21787692703798,0.278847488557207,0.0769502585037971,0.113942055847001,0,0.0897576444097721,0,0,0,0,0,0.156980256395025,0,0,0.19606253431774,0.335643173951685,0.189753732724185,0.158936578980379,0,0.163232808159148,0.282706142867882,0,0,0.0884575645033392,0,0.889563386041866,0.247127877893006,0.730953646538188,0.067401132980677,0,0.234264445725339,0.547364367646998,0,0.242780379534093,0.394584402849391,0,0.61214552326098,0.063186579628488,0,0.103688191397247,0,0,0,1.19472429772959,0.569219092059585,0.138674673013139,0.173559738335131,0.293977192243133,0,0,0.171986032471617,0.0967563312890851,0.146178634172371,0.0821154570532092,0.0969890164884194,0,0.225980740780532,0,0,0.189932387867636,0,0,0.213452994739353,0,0,0,0,0,0,0.235694034616795,0.135904206073614,0.209205692624666,0,0.288950589901519,0,0.273810757783986,0,0,0,0,0.458320848023367,0,0.199679000498991,0,0,0.0671834724867263,0,0,0,0.164831716762333,0.0674035438541849,0.196854963029498,0.0846733320657845,0,0.136203406111576,0.160753148465019,0.275078873194468,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| |||
|short_description=p@chr16:11810960..11810964,- | |||
}} |
Revision as of 02:23, 12 January 2014
Short description: | p@chr16:11810960..11810964, - |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | No |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr16:11810960..11810964, - |
Coexpression cluster: | C474_Neutrophils_CD4_CD8_Natural_CD14_Peripheral_CD19 |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
leukocyte | 3.20e-13 | 136 |
CD4-positive, alpha-beta T cell | 2.41e-12 | 6 |
nongranular leukocyte | 3.03e-12 | 115 |
natural killer cell | 1.09e-11 | 3 |
pro-NK cell | 1.09e-11 | 3 |
hematopoietic stem cell | 1.47e-11 | 168 |
hematopoietic cell | 8.34e-11 | 177 |
mature alpha-beta T cell | 9.34e-11 | 18 |
alpha-beta T cell | 9.34e-11 | 18 |
immature T cell | 9.34e-11 | 18 |
mature T cell | 9.34e-11 | 18 |
immature alpha-beta T cell | 9.34e-11 | 18 |
hematopoietic oligopotent progenitor cell | 1.14e-10 | 161 |
hematopoietic multipotent progenitor cell | 1.14e-10 | 161 |
hematopoietic lineage restricted progenitor cell | 5.89e-10 | 120 |
classical monocyte | 4.15e-08 | 42 |
CD14-positive, CD16-negative classical monocyte | 4.15e-08 | 42 |
T cell | 1.10e-07 | 25 |
pro-T cell | 1.10e-07 | 25 |
myeloid leukocyte | 3.72e-07 | 72 |
defensive cell | 5.37e-07 | 48 |
phagocyte | 5.37e-07 | 48 |
Ontology term | p-value | n |
---|---|---|
vermiform appendix | 9.17e-09 | 1 |
caecum | 9.17e-09 | 1 |
midgut | 9.17e-09 | 1 |