FFCP PHASE1:Hg19::chr15:93616340..93616395,-: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=56963 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=30308 | |||
|TSSclassifier=strong | |||
|UniProt=F5GZU6,G3V545,Q96B86 | |||
|association_with_transcript=0bp_to_ENST00000542321,ENST00000557420,ENST00000557608,NM_001166286,uc002bsq.1_5end | |||
|description=CAGE_peak_2_at_RGMA_5end | |||
|id=chr15:93616340..93616395,- | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_development_v019=UBERON:0006601;1.70e-07;82 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0007023!3.13e-36!115;UBERON:0005743!5.96e-31!86;UBERON:0001017!1.15e-30!82;UBERON:0000073!9.17e-29!94;UBERON:0001016!9.17e-29!94;UBERON:0000924!7.74e-28!173;UBERON:0006601!7.74e-28!173;UBERON:0004121!9.36e-28!169;UBERON:0003075!2.56e-27!86;UBERON:0007284!2.56e-27!86;UBERON:0001049!3.36e-27!57;UBERON:0005068!3.36e-27!57;UBERON:0006241!3.36e-27!57;UBERON:0007135!3.36e-27!57;UBERON:0002346!5.26e-27!90;UBERON:0000153!6.22e-27!129;UBERON:0007811!6.22e-27!129;UBERON:0000033!8.82e-27!123;UBERON:0002616!2.49e-26!59;UBERON:0000955!1.01e-23!69;UBERON:0006238!1.01e-23!69;UBERON:0000475!4.57e-21!365;UBERON:0003080!8.16e-20!42;UBERON:0003056!2.93e-19!61;UBERON:0002780!3.63e-19!41;UBERON:0001890!3.63e-19!41;UBERON:0006240!3.63e-19!41;UBERON:0002020!5.05e-18!34;UBERON:0003528!5.05e-18!34;UBERON:0001893!8.52e-18!34;UBERON:0002791!2.62e-17!33;UBERON:0001869!7.93e-17!32;UBERON:0000481!5.10e-16!347;UBERON:0000468!7.79e-15!659;UBERON:0000064!1.47e-14!219;UBERON:0000956!2.82e-13!25;UBERON:0000203!2.82e-13!25;UBERON:0000922!6.98e-12!612;UBERON:0002619!1.34e-11!22;UBERON:0000062!3.17e-11!511;UBERON:0001950!9.98e-11!20;UBERON:0000119!4.73e-10!312;UBERON:0000483!1.14e-09!309;UBERON:0000467!1.21e-09!625;UBERON:0002050!1.47e-09!605;UBERON:0005423!1.47e-09!605;UBERON:0000480!1.89e-09!626;UBERON:0000923!2.89e-09!604;UBERON:0005291!2.89e-09!604;UBERON:0006598!2.89e-09!604;UBERON:0002532!2.89e-09!604;UBERON:0003076!1.53e-08!15;UBERON:0003057!1.53e-08!15;UBERON:0000477!1.62e-07!286;UBERON:0004111!7.29e-07!241 | |||
|ontology_enrichment_uberon_v019=UBERON:0003528;1.30e-17;34!UBERON:0002020;1.30e-17;34!UBERON:0001893;1.53e-17;34!UBERON:0001869;1.81e-17;32!UBERON:0002791;1.87e-17;32!UBERON:0002780;4.65e-16;41!UBERON:0001890;4.65e-16;41!UBERON:0000073;5.82e-16;53!UBERON:0002616;5.82e-16;53!UBERON:0000956;4.78e-15;25!UBERON:0000203;4.78e-15;25!UBERON:0002619;4.24e-13;22!UBERON:0001017;4.16e-12;75!UBERON:0001950;4.25e-12;20!UBERON:0007023;2.01e-11;114!UBERON:0000955;7.49e-11;68!UBERON:0001016;1.23e-10;83!UBERON:0000922;3.31e-08;49!UBERON:0011216;4.21e-08;132!UBERON:0004733;1.83e-07;12!UBERON:0002028;1.83e-07;12!UBERON:0004732;1.88e-07;13!UBERON:0000125;5.95e-07;9!UBERON:0002308;5.95e-07;9!UBERON:0004921;7.41e-07;33 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0007023,7.89e-43,114;UBERON:0001017,2.66e-32,81;UBERON:0001049,1.90e-30,56;UBERON:0005068,1.90e-30,56;UBERON:0006241,1.90e-30,56;UBERON:0007135,1.90e-30,56;UBERON:0001016,1.57e-29,89;UBERON:0003075,6.31e-29,82;UBERON:0007284,6.31e-29,82;UBERON:0000073,3.85e-28,53;UBERON:0002616,3.85e-28,53;UBERON:0002346,6.18e-28,86;UBERON:0004121,2.61e-27,171;UBERON:0000924,2.61e-27,171;UBERON:0006601,2.61e-27,171;UBERON:0000955,1.95e-24,68;UBERON:0006238,1.95e-24,68;UBERON:0010371,3.16e-23,104;UBERON:0011216,1.97e-22,223;UBERON:0010314,4.00e-22,132;UBERON:0002780,6.38e-22,41;UBERON:0001890,6.38e-22,41;UBERON:0003080,6.38e-22,41;UBERON:0006240,6.38e-22,41;UBERON:0003528,1.34e-20,34;UBERON:0002020,1.34e-20,34;UBERON:0001893,2.46e-20,34;UBERON:0003056,3.04e-19,61;UBERON:0001869,3.25e-19,32;UBERON:0002791,3.48e-19,32;UBERON:0000956,4.17e-15,25;UBERON:0000203,4.17e-15,25;UBERON:0002619,3.62e-13,22;UBERON:0001950,3.69e-12,20;UBERON:0003076,1.24e-09,15;UBERON:0003057,1.24e-09,15;UBERON:0000922,6.72e-09,592;UBERON:0000923,3.44e-08,560;UBERON:0010316,3.44e-08,560;UBERON:0005291,3.44e-08,560;UBERON:0006598,3.44e-08,560;UBERON:0010317,3.44e-08,560;UBERON:0002532,3.44e-08,560;UBERON:0002050,4.45e-08,564;UBERON:0004732,1.81e-07,13;UBERON:0004733,1.93e-07,12;UBERON:0002028,1.93e-07,12;UBERON:0007277,1.93e-07,12;UBERON:0000119,2.04e-07,309;UBERON:0005423,2.32e-07,581;UBERON:0000483,4.58e-07,306;UBERON:0000125,5.69e-07,9;UBERON:0002308,5.69e-07,9 | |||
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| |||
|short_description=p2@RGMA | |||
}} |
Revision as of 01:24, 12 January 2014
Short description: | p2@RGMA |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_2_at_RGMA_5end |
Coexpression cluster: | NA |
Association with transcript: | 0bp_to_ENST00000542321, ENST00000557420, ENST00000557608, NM_001166286, uc002bsq.1_5end |
EntrezGene: | RGMA |
HGNC: | 30308 |
UniProt: | F5GZU6G3V545Q96B86 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data