FFCP PHASE1:Hg19::chr15:90931547..90931558,+: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
Line 1: | Line 1: | ||
{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=8826 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=6110 | |||
|TSSclassifier=strong | |||
|UniProt= | |||
|association_with_transcript=-28bp_to_ENST00000559809_5end | |||
|description=CAGE_peak_2_at_IQGAP1_5end | |||
|id=chr15:90931547..90931558,+ | |||
|ontology_enrichment_celltype=CL:0000766!2.00e-22!76;CL:0000557!1.80e-20!71;CL:0002009!2.46e-19!65;CL:0002194!2.12e-18!63;CL:0000576!2.12e-18!63;CL:0000040!2.12e-18!63;CL:0000559!2.12e-18!63;CL:0000839!2.32e-18!70;CL:0002057!6.43e-16!42;CL:0000860!2.54e-15!45;CL:0000763!1.64e-11!112;CL:0000049!1.64e-11!112;CL:0000738!1.87e-11!140;CL:0002031!6.18e-08!124;CL:0000134!3.57e-07!358;CL:0002087!4.62e-07!119 | |||
|ontology_enrichment_celltype_v019=CL:0000860;3.40e-15;33!CL:0002057;3.40e-15;33!CL:0000473;1.81e-14;39!CL:0000234;1.81e-14;39!CL:0000576;8.27e-11;48!CL:0000766;5.78e-10;69 | |||
|ontology_enrichment_celltype_v019_2=CL:0000766,4.55e-23,72;CL:0000557,4.31e-21,67;CL:0002009,5.49e-20,61;CL:0002194,4.94e-19,59;CL:0000576,4.94e-19,59;CL:0000040,4.94e-19,59;CL:0000559,4.94e-19,59;CL:0000839,6.40e-19,66;CL:0000473,2.83e-18,48;CL:0000234,2.83e-18,48;CL:0000860,5.73e-16,42;CL:0002057,5.73e-16,42;CL:0000763,1.32e-11,108;CL:0000049,1.32e-11,108;CL:0000738,2.28e-11,136;CL:0002031,7.65e-08,120;CL:0000134,2.64e-07,354;CL:0002087,5.89e-07,115;CL:0002320,8.32e-07,361 | |||
|ontology_enrichment_development_v019=CL:0002057;2.24e-11;42 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002390!3.82e-18!102;UBERON:0003061!3.82e-18!102;UBERON:0002371!1.09e-17!80;UBERON:0002193!1.15e-17!112;UBERON:0001474!1.53e-15!86;UBERON:0004765!3.93e-15!101;UBERON:0001434!3.93e-15!101;UBERON:0003081!9.69e-15!216;UBERON:0002204!3.16e-11!167;UBERON:0000926!1.77e-09!448;UBERON:0004120!1.77e-09!448;UBERON:0006603!1.77e-09!448;UBERON:0002405!2.43e-09!115 | |||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002390,1.87e-18,98;UBERON:0003061,1.87e-18,98;UBERON:0002371,3.24e-18,76;UBERON:0002193,8.28e-18,108;UBERON:0003081,4.82e-17,203;UBERON:0002405,5.30e-17,93;UBERON:0004765,5.72e-16,90;UBERON:0001474,7.15e-16,82;UBERON:0001434,1.06e-14,100;UBERON:0000926,2.73e-14,315;UBERON:0004120,2.73e-14,315;UBERON:0006603,2.73e-14,315;UBERON:0002204,5.62e-11,167;UBERON:0002384,8.33e-07,371 | |||
|phase1_expression=3.99692434395225,3.42560838225573,3.52386010239928,8.00586386825043,4.02264984984559,2.61701557230111,5.06599756336621,0.631719873426831,0.261185628199839,0.982935746006035,0.697801167972428,1.31064823278103,0.527533956456907,5.19818682432196,2.31978163009541,7.39557661096953,3.01347264011988,2.92124036154949,3.90346239032406,1.23121058076788,1.02000345622126,0.940364164434263,4.86601178122796,3.01123735160345,3.13856598987007,0.534893840235659,1.23150884174919,1.18066171970519,4.72037132218685,8.44424675813868,3.56077083626975,1.83884244895785,0.90361775633475,0.739508020333575,2.78881922089086,1.42169232487422,0.587200878669695,2.21598163412751,4.61252229181326,3.68918480216948,8.2848725468772,8.09734165047449,8.24241816429397,9.01469080433301,5.29026321164333,11.1588668146395,8.36744532860465,7.81218987241469,7.74265927237759,9.20615655430881,8.70946402198942,6.3850202069918,9.65287906062532,3.87290810150296,2.70852973188684,7.71793592124679,7.09555990150399,10.562003768919,12.8555234795779,8.66508373105453,8.95071976118658,14.1836059080288,7.77908264724364,8.95071976118658,11.3181603065148,11.3477044938228,11.8336227309159,6.28121663141858,5.73631210262222,4.12658804939722,9.08099253950053,9.94349617166425,8.22802207346299,9.0839773114135,5.74031609905618,4.61249020118427,7.52601828681517,8.56008289196586,9.48280961512773,3.99017841237748,2.78483348078726,2.73996230646951,0,2.18455444504853,0.889509253863555,1.28019066769952,1.20118796110804,2.87376219977242,4.62731410949403,1.90810750907073,4.55370375287559,2.34894875748376,2.6759125968766,0,1.12101712596307,0.526768169550154,0.590129310341499,1.96505381374582,4.93443597598822,6.01871383406441,0.977766799900771,0.473447805734733,1.94826728407911,8.80142609392871,5.89211814949674,3.76607620792156,3.79125409271022,5.25174410875268,3.38154303655683,4.43982342429925,3.31620021343018,7.82468331484642,1.18629250529648,1.87278579662799,4.18142095219907,7.0251792472491,3.44898444241729,4.12352934579156,5.81945291644857,3.18565414324097,2.60433381542567,0.950452044448374,4.51725357233318,4.35154477925022,2.49861453104692,6.39298580518846,8.21127996921047,4.03213486449465,3.4767225451856,1.59306844271079,2.43806866313962,5.36560687762909,4.73091478821062,6.50590474292219,4.01070328508712,3.18662341713812,11.1340032587154,2.91980922181582,2.83604451492204,3.1042115644759,1.84453049955565,2.35762335895883,0,0.741568885568859,5.19275829847493,6.79105975467142,5.45127638127347,4.29283123749616,4.0039643754609,4.45749001595478,3.57772333260069,6.02164216574287,5.9013885273291,5.08777147731609,2.09749718104953,4.12677062910101,5.01587919688345,6.71883573840255,7.1153252537342,6.02497102976406,4.02829317109147,3.04108842287405,2.4406205754817,5.8826092855339,5.67099363517232,6.42958043645374,5.61323431565425,4.16662477788292,3.06633274931766,6.6448596169769,4.39684185432977,3.9534125230819,11.6334079244498,0,3.47880366186723,7.97772223486853,18.9345128562903,12.0471380714502,3.54668382198357,3.92474320099615,1.06748995729705,3.94668077467456,5.29058760179603,4.31074150623002,3.59616186849609,0.756787138224657,5.76175924479999,1.87457145467037,2.49728061464256,1.1409436430889,1.49448680551801,2.46612447151906,2.5899671098901,2.10676210053373,3.47062091133319,3.80786383666481,5.06296327761251,5.94001428641027,2.71993622206413,1.82032272387605,0.718618141816238,2.86171393721913,2.00189631795143,4.43302584774693,4.82875382968922,2.45190236639216,3.45547535485173,4.65071950956086,19.3740806543971,4.91181994282705,4.4505699243508,11.4034616512073,7.00757198821385,15.2007918626921,7.07244054060041,12.4894485858537,6.23596833031671,16.6606291001116,5.06274442532646,5.81925804547723,7.81021103536552,4.13083602733325,3.39121184620975,4.44499962275583,5.72766853240753,4.01526433544605,2.19552671033272,2.25300606146525,1.51052125730374,1.14027160516907,1.26160425437814,1.82488679537915,1.56449532329816,7.07565032012174,4.14404764057442,4.17931135228781,2.88751792667834,2.48444280083672,3.03452442140583,3.85617647813571,3.74999507290139,3.92182999366331,5.45722423955522,3.23595139584395,3.92442930250692,5.00171304030308,0.738155454624648,0,0.4115740113314,1.47008711385542,0,0,0.590789906681404,2.20731549707325,1.10689594688802,2.91665277507493,5.1582634142054,1.1240175325762,3.01586917234893,1.94435734832912,0.651616610620649,2.07986957055916,7.21656710126366,2.55046890945169,4.69634776943287,2.30986316417718,0.925971025153221,3.61482889245737,0,2.57545848628462,8.8638122191463,4.68008530278475,6.24250881612659,4.68669169933885,8.7350706663407,4.96212840348353,5.46306988487375,6.68458058582112,2.30029607499127,12.8092441852945,5.98729351289937,5.59785911960085,5.47655822984453,5.6809095041871,4.25435891757533,2.29193055334967,1.17217447210047,1.71072446022705,1.95372236136315,3.60411669412701,3.71574362419752,1.12131084345361,0.87192013766656,4.62031200671985,3.74887975697556,0,1.690605505112,4.5209479819428,3.12022310734098,0.514414748524284,0,1.5985330740966,3.14551586047925,3.25572963234866,1.64648067356154,3.90883421152482,1.77695974371273,1.58390374586686,3.61727252471503,3.48613383440118,4.09889263846434,6.08118903205952,7.5338563714819,6.32501818449095,4.31324739884849,8.04033550838797,4.27910715122155,5.50168965336801,5.75333703141074,4.1184021545176,3.36255431980582,5.12279976525011,4.52817907204986,2.31017465303547,4.8277978602268,1.30139853857622,2.31986643833309,2.01019518401218,1.27587750330633,15.7291475028908,2.99161459204025,13.6757119433892,3.43536176813592,3.50119364741774,1.08506009479894,7.27898015357825,4.99601168632053,4.25796520591624,7.02848489956279,5.71797589482666,0,4.1389228517002,2.65690239414175,2.76553752812555,5.12613325361689,0,0,6.20304078368662,2.80428461064202,4.05564719653088,0.606255142892519,3.32870879020994,0.604780586659361,4.21783273291921,18.7223607411436,4.2099014164961,7.43207065683066,5.62877973973374,3.69964018630297,0,2.31314540703983,1.9531789784444,3.12083192852475,4.67328986265259,1.85936605535935,2.53804844142407,4.41114234667227,1.56537681191024,2.75554675595056,2.36718518408732,2.36023946926963,0.902399225814824,2.77255213575893,0,1.46139224653261,3.37765212457202,1.13733384070897,1.70093705276516,4.75015015424707,1.54227252690289,1.35473218771926,1.00337954770971,0.764628819135115,1.66215201785745,1.11937377361089,0.877039506583738,0,2.82095137628028,0.656029291399411,3.90454073597164,3.09123034943167,1.83138929636687,1.89771849817352,1.72279661398852,2.60024098414608,6.42735719376638,2.03008508413456,1.54048617114644,1.99554777143968,2.48105830472155,3.11518710117994,1.88521702088497,1.96021243057032,2.67096106940212,6.61139661443912,4.22818148203234,10.4642424245559,3.13589120652205,0.464845549297286,13.8517432605482,2.0911118104818,3.69640296211307,2.12922412126809,0.869932992075073,3.15051172476664,3.72124705529177,1.86079184679834,5.37845022021834,4.19386426632415,0.255897791311334,3.42351190427136,3.5002357271853,0.78494864019923,1.61885211824983,3.84351841630477,2.35624804691373,5.0545620393329,6.34041284692033,2.10629228119491,0,1.70599442741899,1.05650146756755,3.54899769660763,2.12108147930569,2.26016233240486,4.96228809191512,2.65375590096488,5.69986150829892,0.578775534266688,3.27947376023316,4.26111791621678,1.54911749049875,1.97186921772569,3.44187245289724,4.22470876356421,2.1400263088875,4.61189383291777,4.22215270595328,3.95153871551882,0.75894634753143,1.39973888097993,2.69421915631434,0.670302275535787,4.3556393944529,3.67160823029439,0.43050537267123,1.68471475667626,0.886860307073351,1.37834040124176,4.05958087385735,8.41100927856613,4.5571774973933,5.24109906007136,5.75907182320672,6.48473311192717,4.86028293514303,4.75875105776562,3.73884248946156,0,0.490080431962063,2.22963810150862,1.73123055571734,2.84567373393656,1.91311527274587,3.39284931435788,2.68107518185313,2.11673582723883,0.649243880549111,1.12318871245384,3.19528550646469,1.25343916618419,2.50634477090067,2.03150133361924,1.2847046008296,1.41259795033733,2.12923118845163,3.77855879231341,1.84344458585075,2.01308497103174,2.50273712567863,2.54004524022652,1.39203086947621,2.46174797895425,1.35227839237992,0.66614393599564,4.22961015263549,4.30423242938906,7.47191714286659,3.6408156524854,0.66866030566487,3.97790605528978,3.58116727106535,0.593929361665277,2.15012491469462,0.994147647766298,0.984685914873589,1.8922479853894,0.329607748453519,0,7.17292757703851,2.21027132424918,2.26739473068848,7.26107645765299,0.369254416383208,4.97663340258892,2.87578723671446,6.44476228832193,0.511572370226872,6.90503839458535,4.7896618469388,5.55684950723184,0,0.927680981618513,1.99613798001194,2.3438498497671,2.44887999989348,3.62499787717397,3.18621655199399,3.0510438035132,6.85524277127015,1.03423011972439,2.33283690706603,1.38899995946634,0,0.361789315876224,0,0.884634079449797,0.591095237907095,1.31631238292384,3.59496929612668,2.37020365273626,7.8489263673873,5.24133456896206,2.3056390438806,4.75715515371792,7.27937391877454,4.46601623624687,3.57230614267263,3.73124343213044,2.04386596391473,2.5116841023204,3.49044531990328,0.225595660617181,0.784250137270958,0.671286347903371,0.37950746544837,3.17873157960757,1.26598838716816,1.63232808159148,2.40300221437699,0.865554558968364,1.99052386215701,4.95362361218699,3.05515072466813,0.889563386041866,1.48276726735803,1.35748534357092,1.95463285643963,7.2231988256891,0.234264445725339,2.73682183823499,2.34797542718508,2.91336455440911,4.3404284313433,4.83962864194656,1.22429104652196,4.61262031287962,1.80388103297391,1.34794648816421,4.6525771089503,2.31694369112849,2.82539626566503,1.19472429772959,1.13843818411917,4.02156551738102,1.38847790668105,2.05784034570193,1.82824333818845,5.2418000472609,9.45923178593891,3.96700958285249,2.85048336636124,3.44884919623479,5.23740689037465,0.882561266915003,1.12990370390266,3.28900619152202,1.78843150532691,0.696418755514666,0.977756913674015,1.12222348352147,1.70762395791482,0.799238438328521,2.4495370916198,2.29073192331831,0,2.73704116177484,3.47907099583211,4.47818665771911,4.34893459435565,6.06696508611533,2.75395187618069,7.22376474753797,1.20084057741958,0.958337652243951,1.27746588066972,6.44648162129936,0.788662062837943,8.93703684071214,6.64565229633883,4.30723814746088,1.99679000498991,1.71690419254628,1.78537165953498,2.01550417460179,3.60299883542404,1.16495949527454,0.945398187686684,0.906574442192831,1.01105315781277,2.06697711180972,1.6087933092499,0.795229689809303,1.49823746722733,2.08979093004525,5.08895915409765,2.07720169014593,10.348799011369,6.1904156364636,0.546746009922222,3.68978156359193,3.86147965766071,2.6751839948849,1.6896053843105,2.86859742932552,2.30298236783334,5.00286728461357,0.662091970365432,3.5597595271665,2.17199840701485,2.5926644736038,3.91904832131291,0,1.39557285273876,2.72620834856675,5.32566830144591,1.02586563574658,0,1.55139547633861,0.92562821219883,6.67238667748885,3.52407511158336,4.48507132784318,3.61569901729232,4.55662960881915,5.95399226174341,1.18566979138767,1.21792598380896,6.38341257770182,5.44017803369474,4.7631079864313,4.90152922821539,2.95085367638824,0.471162288750703,0,0.244052529803926,0.876336514945499,2.86704597845036,0.887432412294818,1.55241007353459,1.52183498429854,2.62458856720424,1.36484205787483,4.28198000317451,0.941063278792687,0.936669811613763,0.579684114443301,2.38807684618998,2.57084640831947,4.43844689202091,6.81850818990321,3.0188148210309,6.22867855117575,5.94984177832001,4.99062048418689,3.57505561340395,4.13994419970975,5.89398038505699,3.59842489730884,4.81315166316404,6.63529932545369,4.25346743292792,5.73919567992907,5.10875870590543,4.56966254602554,1.62748293281865,5.8191570944819,7.4113284359317,5.56840511854192,7.96191777397232,5.200360940621,3.43395705182793,4.71449284272287,3.78554694685953,2.31143796488764,4.50327341887344,0.782982875895635,2.94717703165954,3.24131464053368,3.18157715858408,9.13353089515586,7.10243328470236,5.48210123946768,2.65033718918822,5.59450710985653,6.25087030416369,2.56241518587947,1.0362910251936,1.21543982470953,1.10606748921385,13.6402216187572,7.04183653660824,5.5612234046987,0.327609848846413,2.70350199629091,1.90180911022764,4.59971010466339,1.70706767510625,2.58322469491223,7.9452233499357,6.44370825881442,0.839277046316667,3.11038630016486,1.15104934173287,1.40172254815686,0.943595651135378,0.218419276384028,2.37625541935635,0.212574920101683,3.22232987073406,1.11728983594649,8.5861174676423,2.44471409503885,0,3.52675943690684,3.9811912055916,1.22035527683273,4.25089728976755,0.638535436228605,0.205116364240755,1.51243017733031,0.484100767249525,0.807378228159255,0,3.33702242903487,0.943757786781923,5.13600075860701,1.5018336599544,7.62764190934334,1.3807198521202,3.77940822020922,3.91093707416138,1.61364054962816,2.34454203369928,11.5238945571826,5.73201711285339,1.92212912082159,0.810451015420736,0,1.44680757550829,0.760989722326882,1.09394961803644,10.9651553371436,9.92422356778589,1.75871244359621,2.04419884223352,1.07140367175657,0,3.03482802118316,2.27662191351298,7.00748724284847,1.15233987555779,3.08678416987353,1.4953341254903,0.591954962065642,4.8459474762427,1.22354542081276,5.0235579424329,0.314231179832004,3.64353812307926,5.47895232305697,4.75040700680967,0.47775168788705,1.50100742770978,0.158013611732727,4.18469131325251,1.21700790611806,1.60342272946051,4.55875561158681,6.31658365247615,13.8251932362818,9.03477453522583,3.4316280211864,4.4310970474762,1.69354820076372,3.6657098967048,1.86123831398592,1.91107787795487,0.671132590786754,4.22046004545545,1.70685094975177,11.6537190693821,3.90118666053739,0,3.39997695141398,1.63757624423474,1.19370465096821,1.30812099855325,4.29195111748048,0.109940516745429,5.1327366812669,5.32501690944818,1.5299169235277,1.41095188908457,6.37385636560154,1.64973582971138,1.17785080268967,0.594092800654172,1.6906229103336,3.39854229375634,6.39090642263004,3.48072595057317,2.19870543034844,1.60698544745092,0.705789743431384,1.84555143385087,2.19100916473955,7.33966853447265,1.00337708206016,2.0510303085114,0.883889372481891,1.74540276136151,3.1741610430924,2.97596014533401,3.69740502905135,3.8936390591141,1.64016352285603,3.38723273087456,1.14028650910293,4.18154201942125,1.3360870263278,2.48116228744081,4.51273570726275,3.41004141982077,0.803892390468535,0,1.34462894620464,6.18378547512845,3.80903090341985,4.32745695901241,2.85543685760946,3.02756028967656,4.00977097152439,3.03175783437329,6.31378568901188,1.36893320434112,3.7717149688169,5.52260981523608,3.32660356546013,4.23296996777067,2.45472895518746,9.653614114347,1.88632924423832,7.03922827210363,9.41259120208072,5.2896503181046,5.3260541934841,4.42802345900258,1.28227396921293 | |||
|short_description=p2@IQGAP1 | |||
}} |
Revision as of 01:14, 12 January 2014
Short description: | p2@IQGAP1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_2_at_IQGAP1_5end |
Coexpression cluster: | NA |
Association with transcript: | -28bp_to_ENST00000559809_5end |
EntrezGene: | IQGAP1 |
HGNC: | 6110 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
myeloid leukocyte | 4.55e-23 | 72 |
granulocyte monocyte progenitor cell | 4.31e-21 | 67 |
macrophage dendritic cell progenitor | 5.49e-20 | 61 |
monopoietic cell | 4.94e-19 | 59 |
monocyte | 4.94e-19 | 59 |
monoblast | 4.94e-19 | 59 |
promonocyte | 4.94e-19 | 59 |
myeloid lineage restricted progenitor cell | 6.40e-19 | 66 |
defensive cell | 2.83e-18 | 48 |
phagocyte | 2.83e-18 | 48 |
classical monocyte | 5.73e-16 | 42 |
CD14-positive, CD16-negative classical monocyte | 5.73e-16 | 42 |
myeloid cell | 1.32e-11 | 108 |
common myeloid progenitor | 1.32e-11 | 108 |
leukocyte | 2.28e-11 | 136 |
hematopoietic lineage restricted progenitor cell | 7.65e-08 | 120 |
mesenchymal cell | 2.64e-07 | 354 |
nongranular leukocyte | 5.89e-07 | 115 |
connective tissue cell | 8.32e-07 | 361 |
Ontology term | p-value | n |
---|---|---|
hematopoietic system | 1.87e-18 | 98 |
blood island | 1.87e-18 | 98 |
bone marrow | 3.24e-18 | 76 |
hemolymphoid system | 8.28e-18 | 108 |
lateral plate mesoderm | 4.82e-17 | 203 |
immune system | 5.30e-17 | 93 |
skeletal element | 5.72e-16 | 90 |
bone element | 7.15e-16 | 82 |
skeletal system | 1.06e-14 | 100 |
mesoderm | 2.73e-14 | 315 |
mesoderm-derived structure | 2.73e-14 | 315 |
presumptive mesoderm | 2.73e-14 | 315 |
musculoskeletal system | 5.62e-11 | 167 |
connective tissue | 8.33e-07 | 371 |