FFCP PHASE1:Hg19::chr15:56657762..56657777,+: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=374618 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=29585 | |||
|TSSclassifier=strong | |||
|UniProt= | |||
|association_with_transcript=0bp_to_ENST00000558083_5end | |||
|coexpression_cluster_id=C78 | |||
|description=CAGE_peak_3_at_TEX9_5end | |||
|id=chr15:56657762..56657777,+ | |||
|ontology_enrichment_celltype=CL:0000945!2.89e-16!24;CL:0000826!2.89e-16!24;CL:0000236!2.15e-10!14 | |||
|ontology_enrichment_celltype_v019=CL:0000945;2.86e-33;24!CL:0000236;6.56e-13;13!CL:0000542;4.85e-10;53!CL:0000946;1.05e-08;1!CL:0000786;1.05e-08;1!CL:0000037;3.96e-08;1!CL:0001024;3.96e-08;1 | |||
|ontology_enrichment_celltype_v019_2=CL:0000945,1.85e-33,24;CL:0000826,1.85e-33,24;CL:0000236,2.54e-17,14;CL:0000838,2.16e-14,52;CL:0000542,4.40e-14,53;CL:0000051,4.40e-14,53;CL:0000946,1.05e-08,1;CL:0000786,1.05e-08,1;CL:0000980,1.05e-08,1;CL:0001024,4.41e-08,1 | |||
|ontology_enrichment_development_v019=CL:0000051;4.85e-10;53!UBERON:0001045;3.96e-08;1!UBERON:0008425;3.96e-08;1 | |||
|ontology_enrichment_disease=DOID:14566!1.69e-08!239;DOID:162!2.59e-08!235;DOID:305!4.72e-07!106 | |||
|ontology_enrichment_disease_v019=DOID:0060058;7.53e-12;10!DOID:630;1.13e-08;1!DOID:0050177;1.13e-08;1!DOID:0050427;1.13e-08;1 | |||
|ontology_enrichment_disease_v019_2=DOID:0060058,7.54e-12,10;DOID:630,1.13e-08,1;DOID:0050177,1.13e-08,1;DOID:0050427,1.13e-08,1 | |||
|ontology_enrichment_uberon= | |||
|ontology_enrichment_uberon_v019=UBERON:0002106;2.53e-10;3!UBERON:0001154;3.96e-08;1!UBERON:0001153;3.96e-08;1!UBERON:0009854;3.96e-08;1 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002106,3.42e-10,3;UBERON:0004854,3.42e-10,3;UBERON:0009034,3.42e-10,3;UBERON:0002095,3.42e-10,3;UBERON:0004782,3.42e-10,3;UBERON:0003281,3.42e-10,3;UBERON:0009664,3.42e-10,3;UBERON:0002296,3.42e-10,3;UBERON:0005602,3.42e-10,3;UBERON:0001179,3.42e-10,3;UBERON:0006293,3.42e-10,3;UBERON:0001154,5.82e-08,1;UBERON:0001153,5.82e-08,1;UBERON:0001045,5.82e-08,1 | |||
|phase1_expression=0,0,0.140954404095971,0,0,0,0,0,0,0,0,0,0,0.123766352960047,0,0,0.602694528023977,0,0,0.123121058076788,0,0,0,0.136874425072884,0,0.305653622991805,0.0821005894499457,0.157421562627358,0,0,0,0,0,0,3.71842562785448,3.2698923472107,1.17440175733939,0,0,0,0,0,0,0,0,0,0,0,0.309706370895104,0,0,0,0,0,0,0.188242339542605,0,0,0,0,0,0.329851300186716,0.199463657621632,0,0,0,0,0,0,0,0,0.368277635987565,0,0,0,0,0,0,0,0,0,0,1.75996244461323,1.09227722252426,1.77901850772711,0.853460445133014,0.400395987036012,1.14950487990897,1.32208974556972,0.954053754535364,0.569212969109448,0,0.382273228125229,0,1.12101712596307,2.10707267820062,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.50133791063589,0,0,0.486634870302636,0.0945348171640679,0.443458794925128,0.087834785693126,0.0654895377488563,0,0,0,0,0,0,0.571994910780128,0,0,0,0,0,0,0,0,0,0,0.33472061276467,0,0,0,0,0,0,0,0.112611480483322,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.211931901159562,0,0,0,0,0.168776332241266,0.0974370051611986,0.252433774244115,0,0,0,0.10075209822764,0,0,0,0,0.365921118388786,0.927708378250397,0.348581828608555,0.207322110030741,1.00928340350251,0,0,0,0,0,0,0.118306800039844,0.168584690078102,0,0.110293972732394,0,0,0.134831308160164,0.196221465125346,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.352226082707465,0,0,0,0,0,0,0,0,0,0,0,0.0895585227028483,0,0,0,0,0,0,0,0.253991577168676,0,0,0,0,0,0,0,0,0.07333828582095,0.129271715757778,0,0,0.26593811658487,0,0,0,0.266422179016099,0.142977993658148,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.144781306667579,0,0.179060963239896,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.206768026122887,0,0,0,0,0,0,0.460385919864187,0,0,0,0,0,0,0,0.0821271560138091,0,0,0.120859449591622,0,0,0,0,0,0,0.15403067420883,0,0,0,0,0,0,0,0,0,0.509752546090077,0,0,0.219259876645935,0,0,0,0,0.206082023295445,0,0.330037999682352,0,0,0,0,0,0.15350367472613,0,0,0,0,0.0890320356467374,0,0,0,0,0,0,0.6970372701606,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.438450885253763,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0941438007767792,0,0,0,0,0,0,0,0.476463550915578,0,0,0,0,0.747768497892312,0,0,0,0,0.0711418433484141,0.159426272728822,0,1.1490322207942,0.211673582723883,0,0.280797178113459,0,0.156679895773023,0,0,0,0,0,0,0.307240764308458,0,0,0,0.278406173895242,0,0.270455678475983,0,2.81974010175699,0,0,0,0,0,0.23874448473769,0,0,0,0,0,0,0,0,1.10513566212459,0.251932747854276,0,1.35393286007176,0,0,0,0,0,0,0,0,0,0,0,1.57427999993152,0,0,0,0,1.72371686620732,0.583209226766509,0,0,0,0,0,0,0,0.871507708151921,0.139423744278603,0.0769502585037971,0.341826167541004,0,0.0897576444097721,0,0,0,0,0,0.156980256395025,0.498635045700469,0,0,0,0,0.476809736941136,0,0,0,0.216388639742091,0,0.265372693510018,0,0.296521128680622,0,0,0,0,0.234264445725339,0,0.19566461893209,0,0.394584402849391,1.20990716048664,0,0,2.25485129121739,0.829505531177977,0,0,0,0,0,0,0,0.293977192243133,0.174118413160805,0,0.171986032471617,0.580537987734511,1.24251839046515,0.328461828212837,0.0969890164884194,0,0,0,0,0,0.782205530939212,0.0801588202515337,0,0.599428828746391,0,0.114536596165916,0,0,0.124252535565433,0.235694034616795,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.157566364614447,0.0824158583811665,0.0674035438541849,0,0,0,0,0.643012593860077,0.825236619583403,0.83088067605837,0,0,0,0,0.157611414598396,0,0.105600336519406,0,0,0,0,0,0,0,0,0,0.164185041498678,0,0,0,0,0,0,0.171086837884329,0,0,0,0,0.496166021811951,1.18566979138767,13.7625636170412,0,0,0,0,0,0.314108192500469,0,0,0,0,0,0.0620964029413835,0,0,0,0,0,0.936669811613763,0.434763085832475,0.149254802886874,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.244736704506468,0,0,0.877136198314828,0,0,0,0,0,0,0,0,0,0.163565394255844,0,0.245772908753719,0,0.19998739585493,0.106691729694141,0,0,0.184105950251841,0,0,0,0.323474434190045,0,0.109209638192014,0.33946505990805,0,0.123935764259002,0,0,0,0,0,0,0.0642292250964595,0,0,0,0,0,0,0,0,0,0.183428598521679,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,6.56833729067942,0.171488009437418,0,0,0,0,0.156986185701028,0,0,0,0,2.38875843943525,0,1.26410889386181,0.697448552208751,0,0,0,0,0,0,0.118332000730565,0.0852134047591577,0,0.22910686854405,0,0,0.111855431797792,0,0,0,0,0,0,0,0,0,0.11294608203896,0,0,0.540219106755613,0,0,0,0,0,0,0,0,1.03382309777839,0,3.99764623699716,0,0.352894871715692,0.0802413666891683,0,0,0,0.315543124386369,0,0,0,0.371995018166751,0,0,0.252332849670158,0.546327859818478,0,0.203977659483963,0.26721740526556,2.20547758883628,0.752122617877125,0.0757786982182394,0,0,0,0.213233981900981,0,0,0,0.112131862580613,0,0,0.217716747896961,0,0.404112318087525,0.215166616178029,0.332660356546013,0.651226148887796,0,0,0,0,0,0,0,0.201273793591026,5.44966436915496 | |||
|short_description=p3@TEX9 | |||
}} |
Revision as of 23:43, 11 January 2014
Short description: | p3@TEX9 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_3_at_TEX9_5end |
Coexpression cluster: | C78_lymphoma_plasma_tonsil_appendix_lymph_seminal_trachea |
Association with transcript: | 0bp_to_ENST00000558083_5end |
EntrezGene: | TEX9 |
HGNC: | 29585 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
lymphocyte of B lineage | 1.85e-33 | 24 |
pro-B cell | 1.85e-33 | 24 |
B cell | 2.54e-17 | 14 |
lymphoid lineage restricted progenitor cell | 2.16e-14 | 52 |
lymphocyte | 4.40e-14 | 53 |
common lymphoid progenitor | 4.40e-14 | 53 |
antibody secreting cell | 1.05e-08 | 1 |
plasma cell | 1.05e-08 | 1 |
plasmablast | 1.05e-08 | 1 |
CD34-positive, CD38-negative hematopoietic stem cell | 4.41e-08 | 1 |
Ontology term | p-value | n |
---|---|---|
spleen | 3.42e-10 | 3 |
gastrointestinal system mesentery | 3.42e-10 | 3 |
stomach region | 3.42e-10 | 3 |
mesentery | 3.42e-10 | 3 |
gastrointestinal system serosa | 3.42e-10 | 3 |
mesentery of stomach | 3.42e-10 | 3 |
gut mesentery | 3.42e-10 | 3 |
dorsal mesentery | 3.42e-10 | 3 |
dorsal mesogastrium | 3.42e-10 | 3 |
peritoneal cavity | 3.42e-10 | 3 |
spleen primordium | 3.42e-10 | 3 |
vermiform appendix | 5.82e-08 | 1 |
caecum | 5.82e-08 | 1 |
midgut | 5.82e-08 | 1 |
Ontology term | p-value | n |
---|---|---|
lymphoma | 7.54e-12 | 10 |
genetic disease | 1.13e-08 | 1 |
monogenic disease | 1.13e-08 | 1 |
xeroderma pigmentosum | 1.13e-08 | 1 |