FFCP PHASE1:Hg19::chr15:53082587..53082599,-: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=3175 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=8138 | |||
|TSSclassifier=weak | |||
|UniProt=Q9UBC0 | |||
|association_with_transcript=-378bp_to_ENST00000305901,NM_004498,uc002aci.1_5end | |||
|description=CAGE_peak_2_at_ONECUT1_5end | |||
|id=chr15:53082587..53082599,- | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019=CL:0000123;1.41e-22;2!CL:0000242;1.41e-22;2!CL:0000312;1.34e-09;5!CL:0000182;1.60e-08;12!CL:0000240;3.83e-08;6!CL:0000311;3.83e-08;6!CL:0000079;3.83e-08;6!CL:0000237;3.83e-08;6 | |||
|ontology_enrichment_celltype_v019_2=CL:0000242,1.85e-22,2;CL:0000312,1.49e-09,5;CL:0000182,1.33e-08,12;CL:0000240,4.19e-08,6;CL:0000311,4.19e-08,6;CL:0000079,4.19e-08,6;CL:0000237,4.19e-08,6;CL:0000036,4.19e-08,6;CL:0000357,4.19e-08,6;CL:0000114,4.19e-08,6 | |||
|ontology_enrichment_development_v019=UBERON:0009497;1.61e-28;13!UBERON:0004161;9.98e-24;11!UBERON:0001041;2.18e-16;30!UBERON:0003104;2.28e-08;31!CL:0000357;3.83e-08;6!CL:0000114;3.83e-08;6 | |||
|ontology_enrichment_disease=DOID:0050687!5.61e-13!143;DOID:305!9.85e-12!106;DOID:162!8.74e-10!235;DOID:14566!2.71e-09!239;DOID:7!7.90e-07!39 | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2=DOID:0050687,1.42e-10,143;DOID:305,1.23e-08,106 | |||
|ontology_enrichment_uberon=UBERON:0001049!5.74e-10!57;UBERON:0005068!5.74e-10!57;UBERON:0006241!5.74e-10!57;UBERON:0007135!5.74e-10!57;UBERON:0003076!2.28e-09!15;UBERON:0003057!2.28e-09!15;UBERON:0005743!6.66e-08!86;UBERON:0001017!8.32e-08!82;UBERON:0002346!1.05e-07!90;UBERON:0003075!1.43e-07!86;UBERON:0007284!1.43e-07!86;UBERON:0004733!1.83e-07!12;UBERON:0002028!1.83e-07!12;UBERON:0007277!1.83e-07!12;UBERON:0002616!2.07e-07!59;UBERON:0009497!2.96e-07!25;UBERON:0000015!2.96e-07!25;UBERON:0002423!2.96e-07!25;UBERON:0006235!2.96e-07!25;UBERON:0004161!2.96e-07!25;UBERON:0000073!3.07e-07!94;UBERON:0001016!3.07e-07!94;UBERON:0000955!7.12e-07!69;UBERON:0006238!7.12e-07!69;UBERON:0004732!8.75e-07!13 | |||
|ontology_enrichment_uberon_v019=UBERON:0002423;1.10e-14;25!UBERON:0002107;9.96e-14;19!UBERON:0006925;9.96e-14;19!UBERON:0002365;8.52e-08;31!UBERON:0002330;8.52e-08;31!UBERON:0001003;6.05e-07;15!UBERON:0007376;6.05e-07;15!UBERON:0000949;9.84e-07;43!UBERON:0002368;9.85e-07;33 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0008835,7.84e-17,22;UBERON:0003894,7.84e-17,22;UBERON:0009854,4.37e-16,23;UBERON:0007499,9.02e-15,25;UBERON:0009497,9.02e-15,25;UBERON:0000015,9.02e-15,25;UBERON:0002423,9.02e-15,25;UBERON:0006235,9.02e-15,25;UBERON:0004161,9.02e-15,25;UBERON:0009856,3.44e-14,26;UBERON:0002107,8.25e-14,19;UBERON:0006925,8.25e-14,19;UBERON:0008836,8.25e-14,19;UBERON:0003929,7.47e-09,54;UBERON:0002365,2.01e-08,31;UBERON:0002330,2.01e-08,31;UBERON:0000949,4.54e-08,45;UBERON:0002368,1.92e-07,35;UBERON:0005911,2.96e-07,82;UBERON:0001003,6.37e-07,15;UBERON:0007376,6.37e-07,15;UBERON:0007383,6.37e-07,15 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0.436882744260345,0,0,0,0,0,0,0,0.123121058076788,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0774672005803016,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.589405839739707,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.580969714347592,0.414644220061482,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.590789906681404,0,1.35287282397425,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.063497894292169,0,0,0,0.205654985406647,0,0.571652865261156,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.725156697549733,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.103041011647722,0,0.082509499920588,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.117812402345686,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.282431402330337,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.432807638929335,0.284567373393656,0.159426272728822,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.166849141711909,0.586164286206121,0,0,0.270455678475983,0,0,0,0,0.36408156524854,0,0,0,0.296964680832639,0,0,0.562677665642051,0,0.329607748453519,0,0,0,1.76352923497993,0,0,0,0.0898683511473268,1.43216939740487,0,0,0,0,0,0,0,2.86470537193757,0.174919999992391,0,0.227586896570999,0.508507300585533,0,7.92909758455369,0,0.868124974666461,0,0.120596438625408,0,0.110579259931225,0.295547618953547,0,0.32681539055697,0,0,0,0.23056390438806,0.359030577639089,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.123563938946503,0.104421949505455,0.134802265961354,0,0,0,0,0,0,1.20990716048664,0,0,0,0,0,0,0,0,0,1.10939738410511,0.173559738335131,0,0.522355239482415,0,0,0,0,0,0,0.353024506766001,0,0,0,0.126621591911757,0,0.240476460754601,0.640358984218058,0,0.288180834308212,0,2.05913997434357,0.14405479798815,0,0,0,0,0.101998217636322,0,0,0,0,0,0,0,0,0.717873024576814,0.199679000498991,0,0,0,0,0,1.73323001075892,2.88455504334083,2.49393112260484,0.196854963029498,0,0,0.272406812223151,0.160753148465019,0.137539436597234,0,0,0,0.0607495566580247,0,0,0,0.950403028674658,0,0.383830394638891,0,0,0,0,0,0,0,0,0,0,1.46552233678082,1.32506888912221,0.258565912723101,0.13223260174269,0.171086837884329,0,0,0,0,0,0.197611631897944,0,0,0,0,0.306345576763462,0,0.157054096250234,0,0,0.1251909307065,0,0.110929051536852,0.18628920882415,0.138348634936231,0,0,1.42732666772484,0,3.27834434064817,2.02889440055155,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.192619830407303,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.106691729694141,0,0,0,0,0,0,0.215649622793364,0,0,0.33946505990805,0,0,0,0,0.315446980005013,0,0,0,0,0,0.159633859057151,0,0,0.0691572524642179,0.161475645631851,0,0.588886311006154,0.11796972334774,0,0,0,0,0.397832444232549,0,0,2.34454203369928,0,0,0,0,0,0,0.0634158101939068,0,0,0,0,0.127762427639595,0,0,0,0,0,0,0,0.135939465953663,0.0657727735628491,0.118193840883968,0,0,0,0,0,0,0,0.214429632529969,0,0,0,0,0,0,0,0,0,0,0.423387050190929,0,0,0,0.559277158988962,0.196300467230486,0,0,0,0,0,0.467878926924211,0,0,0,1.53916723443601,0,0,0,0,0,0.235676547101626,0.588925401344836,0,0.4226557275834,0,0,0,0,0,0,0,0,0,0,0,0,0,0.5290268405154,0,0,0,0,0,0.126698501011437,0.61193297845189,0,0.735159196278759,0,0.454672189309436,1.07185652062471,0.829169439458779,0.103432995861895,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0 | |||
|short_description=p2@ONECUT1 | |||
}} |
Revision as of 23:39, 11 January 2014
Short description: | p2@ONECUT1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | No |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_2_at_ONECUT1_5end |
Coexpression cluster: | NA |
Association with transcript: | -378bp_to_ENST00000305901, NM_004498, uc002aci.1_5end |
EntrezGene: | ONECUT1 |
HGNC: | 8138 |
UniProt: | Q9UBC0 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
Merkel cell | 1.85e-22 | 2 |
keratinocyte | 1.49e-09 | 5 |
hepatocyte | 1.33e-08 | 12 |
stratified squamous epithelial cell | 4.19e-08 | 6 |
keratin accumulating cell | 4.19e-08 | 6 |
stratified epithelial cell | 4.19e-08 | 6 |
keratinizing barrier epithelial cell | 4.19e-08 | 6 |
epithelial fate stem cell | 4.19e-08 | 6 |
stratified epithelial stem cell | 4.19e-08 | 6 |
surface ectodermal cell | 4.19e-08 | 6 |
Ontology term | p-value | n |
---|---|---|
hepatic diverticulum | 7.84e-17 | 22 |
liver primordium | 7.84e-17 | 22 |
digestive tract diverticulum | 4.37e-16 | 23 |
epithelial sac | 9.02e-15 | 25 |
epithelium of foregut-midgut junction | 9.02e-15 | 25 |
anatomical boundary | 9.02e-15 | 25 |
hepatobiliary system | 9.02e-15 | 25 |
foregut-midgut junction | 9.02e-15 | 25 |
septum transversum | 9.02e-15 | 25 |
sac | 3.44e-14 | 26 |
liver | 8.25e-14 | 19 |
digestive gland | 8.25e-14 | 19 |
liver bud | 8.25e-14 | 19 |
gut epithelium | 7.47e-09 | 54 |
exocrine gland | 2.01e-08 | 31 |
exocrine system | 2.01e-08 | 31 |
endocrine system | 4.54e-08 | 45 |
endocrine gland | 1.92e-07 | 35 |
endo-epithelium | 2.96e-07 | 82 |
skin epidermis | 6.37e-07 | 15 |
outer epithelium | 6.37e-07 | 15 |
enveloping layer of ectoderm | 6.37e-07 | 15 |
Ontology term | p-value | n |
---|---|---|
cell type cancer | 1.42e-10 | 143 |
carcinoma | 1.23e-08 | 106 |