FFCP PHASE1:Hg19::chr15:45028697..45028709,+: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
Line 1: | Line 1: | ||
{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=140691 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=17857 | |||
|TSSclassifier=strong | |||
|UniProt= | |||
|association_with_transcript=-18bp_to_ENST00000558329,ENST00000560442_5end | |||
|coexpression_cluster_id=C144 | |||
|description=CAGE_peak_10_at_TRIM69_5end | |||
|id=chr15:45028697..45028709,+ | |||
|ontology_enrichment_celltype=CL:0000542!7.18e-37!53;CL:0000051!7.18e-37!53;CL:0000838!1.93e-34!52;CL:0000084!1.82e-29!25;CL:0000827!1.82e-29!25;CL:0000791!4.55e-27!18;CL:0000789!4.55e-27!18;CL:0002420!4.55e-27!18;CL:0002419!4.55e-27!18;CL:0000790!4.55e-27!18;CL:0000625!2.60e-20!11;CL:0000738!4.17e-16!140;CL:0002087!3.92e-14!119;CL:0000453!1.19e-12!5;CL:0002031!4.86e-12!124;CL:0000037!8.37e-12!172;CL:0000566!8.37e-12!172;CL:0002032!1.61e-11!165;CL:0000837!1.61e-11!165;CL:0000988!8.92e-11!182;CL:0000624!3.62e-10!6;CL:0000945!1.60e-08!24;CL:0000826!1.60e-08!24;CL:0000990!4.96e-07!8 | |||
|ontology_enrichment_celltype_v019=CL:0000453;8.71e-11;5!CL:0000815;2.12e-07;2!CL:0000792;2.12e-07;2!CL:0002677;2.12e-07;2 | |||
|ontology_enrichment_celltype_v019_2=CL:0000453,8.29e-11,5;CL:0000815,2.12e-07,2;CL:0000792,2.12e-07,2;CL:0002677,2.12e-07,2 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon= | |||
|ontology_enrichment_uberon_v019=UBERON:0000473;3.45e-07;8 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000473,3.45e-07,8 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.152826811495903,0.0821005894499457,0.157421562627358,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.196709770113833,0.786021525498329,0.205601498999509,4.34684888015763,0,0,0,6.79603786999559,1.47302953737419,2.65840673500345,4.33286182024025,9.22257502024861,10.1446291096705,0.164437904603676,0.276350017785848,0,0.14828656316206,0,0,2.15287751125376,0,0,0.253019692019503,0.637130828648193,0.651083453856419,0,0.451725357233318,0.383959833463255,0,0.236777252044017,0.821127996921047,0.201606743224732,0,0.144824403882799,0,0,0,0,0,0,0,0,0,0,0,1.24430121722827,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.197030760201927,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.431428401637234,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.238231775457789,0.411362273086194,0,0,0,0,0,0,0.557409525377156,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.111443384277478,0,0,0,0,0,0,0,0,0,0,0,0,0,4.92339221844278,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0884575645033392,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.195551382734803,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.262887354279314,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.2249738915515,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.106787412567695,0,0,0,1.58089305518355,1.21792598380896,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.55888247071511,2.39156712564054,0.981392365535065,0,0,0,0.19998739585493,0,0.172214979660816,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.691403925334676,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.154348316215889,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.458729283404541,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.33426272160253,3.48353369203032,0,0,0,0,0,0,0,0,0,0,0,0.336760265072938,0.0717222053926763,0,0,0,0,0,0,0,0,0,0.201273793591026,0.641136984606466 | |||
|short_description=p10@TRIM69 | |||
}} |
Revision as of 23:18, 11 January 2014
Short description: | p10@TRIM69 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_10_at_TRIM69_5end |
Coexpression cluster: | C144_CD4_tonsil_NK_appendix_CD8_splenic_mycosis |
Association with transcript: | -18bp_to_ENST00000558329, ENST00000560442_5end |
EntrezGene: | TRIM69 |
HGNC: | 17857 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
Langerhans cell | 8.29e-11 | 5 |
regulatory T cell | 2.12e-07 | 2 |
CD4-positive, CD25-positive, alpha-beta regulatory T cell | 2.12e-07 | 2 |
naive regulatory T cell | 2.12e-07 | 2 |
Ontology term | p-value | n |
---|---|---|
testis | 3.45e-07 | 8 |