FFCP PHASE1:Hg19::chr15:39888702..39888705,+: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |||
|TSSclassifier=not | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|coexpression_cluster_id=C453 | |||
|description=CAGE_peak_at_chr15:39888702..39888705,+ | |||
|id=chr15:39888702..39888705,+ | |||
|ontology_enrichment_celltype=CL:0002139!3.14e-16!24;CL:0000071!3.58e-12!18;CL:0002546!3.58e-12!18;CL:0000115!4.40e-12!35;CL:0002371!2.54e-11!591;CL:0002078!2.90e-11!44;CL:0000057!2.08e-10!75;CL:0000548!2.04e-09!679;CL:0000004!2.04e-09!679;CL:0000255!2.04e-09!679;CL:0000144!3.56e-09!625;CL:0000012!4.03e-09!682;CL:0000055!5.62e-09!180;CL:0000222!1.22e-08!119;CL:0000136!8.69e-08!15;CL:0000213!2.15e-07!57;CL:0000215!2.15e-07!57;CL:1000413!4.05e-07!9 | |||
|ontology_enrichment_celltype_v019=CL:0002544;7.07e-17;6!CL:0000071;3.57e-13;18!CL:0000346;2.41e-12;3!CL:1000428;2.41e-12;3!CL:0002139;3.66e-12;24!CL:1000413;3.67e-11;9!CL:0000197;7.20e-11;6!CL:0000098;7.20e-11;6!CL:0002167;7.20e-11;6!CL:0000136;7.86e-11;13!CL:0000115;2.00e-09;36!CL:0002545;2.52e-09;2!CL:0002334;3.11e-08;12!CL:0002559;1.37e-07;5!CL:0002556;9.53e-07;6 | |||
|ontology_enrichment_celltype_v019_2=CL:0002544,2.17e-16,6;CL:0000071,6.28e-13,18;CL:0002546,6.28e-13,18;CL:0000346,2.28e-12,3;CL:1000428,2.28e-12,3;CL:0002139,5.81e-12,24;CL:0000197,3.02e-11,6;CL:0000098,3.02e-11,6;CL:0002167,3.02e-11,6;CL:0000115,3.68e-11,36;CL:1000413,7.60e-11,9;CL:0000136,3.86e-09,15;CL:0002545,3.99e-09,2;CL:0002078,1.69e-08,45;CL:0002334,2.56e-08,12;CL:0002559,1.33e-07,5;CL:0000213,2.17e-07,58;CL:0000215,2.17e-07,58 | |||
|ontology_enrichment_development_v019=CL:0002546;3.57e-13;18 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019=DOID:3307;3.66e-09;2!DOID:1192;6.66e-07;3 | |||
|ontology_enrichment_disease_v019_2=DOID:3307,2.06e-09,2;DOID:1192,6.40e-07,3 | |||
|ontology_enrichment_uberon=UBERON:0000055!8.52e-14!69;UBERON:0001986!3.58e-12!18;UBERON:0004638!3.58e-12!18;UBERON:0004852!3.58e-12!18;UBERON:0001981!8.59e-12!60;UBERON:0007500!8.59e-12!60;UBERON:0004537!8.59e-12!60;UBERON:0006965!8.59e-12!60;UBERON:0002049!9.02e-12!79;UBERON:0007798!9.02e-12!79;UBERON:0000487!1.82e-10!22;UBERON:0006914!1.75e-09!25;UBERON:0004872!2.92e-09!84;UBERON:0001637!1.55e-08!42;UBERON:0003509!1.55e-08!42;UBERON:0004572!1.55e-08!42;UBERON:0003914!1.10e-07!118;UBERON:0003102!1.13e-07!95;UBERON:0004535!3.79e-07!110;UBERON:0003915!4.05e-07!9;UBERON:0004700!4.05e-07!9;UBERON:0001917!4.05e-07!9;UBERON:0001009!4.77e-07!113;UBERON:0003688!5.94e-07!6;UBERON:0002358!5.94e-07!6;UBERON:0003684!5.94e-07!6;UBERON:0001178!5.94e-07!6;UBERON:0004923!6.26e-07!57 | |||
|ontology_enrichment_uberon_v019=UBERON:0000487;2.82e-13;22!UBERON:0004638;3.57e-13;18!UBERON:0001986;3.57e-13;18!UBERON:0004852;3.57e-13;18!UBERON:0000412;2.41e-12;3!UBERON:0001992;2.41e-12;3!UBERON:0006914;1.73e-11;25!UBERON:0003915;3.67e-11;9!UBERON:0004700;3.67e-11;9!UBERON:0001917;3.67e-11;9!UBERON:0003688;5.69e-11;6!UBERON:0002358;5.69e-11;6!UBERON:0003684;5.69e-11;6!UBERON:0001178;5.69e-11;6!UBERON:0005800;2.52e-09;2!UBERON:0001515;2.52e-09;2!UBERON:0005406;3.66e-09;2!UBERON:0000947;1.04e-08;21!UBERON:0010191;1.04e-08;21!UBERON:0000490;7.60e-08;33!UBERON:0002073;1.37e-07;5!UBERON:0004457;2.48e-07;9!UBERON:0000042;2.48e-07;9!UBERON:0004573;5.85e-07;33!UBERON:0004571;5.85e-07;33!UBERON:0001758;9.53e-07;6!UBERON:0003672;9.53e-07;6 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000487,4.27e-13,22;UBERON:0004638,6.28e-13,18;UBERON:0001986,6.28e-13,18;UBERON:0004852,6.28e-13,18;UBERON:0000412,2.28e-12,3;UBERON:0001992,2.28e-12,3;UBERON:0006914,2.47e-11,25;UBERON:0003688,5.71e-11,6;UBERON:0002358,5.71e-11,6;UBERON:0003684,5.71e-11,6;UBERON:0001178,5.71e-11,6;UBERON:0003915,7.60e-11,9;UBERON:0004700,7.60e-11,9;UBERON:0001917,7.60e-11,9;UBERON:0005406,2.64e-09,2;UBERON:0005800,3.99e-09,2;UBERON:0001515,3.99e-09,2;UBERON:0000947,1.80e-08,21;UBERON:0010191,1.80e-08,21;UBERON:0002073,1.33e-07,5;UBERON:0005086,1.33e-07,5 | |||
|phase1_expression=0.726713517082227,1.07050261945492,1.12763523276777,3.00219895059391,0.893922188854576,2.61701557230111,2.53299878168311,0,0.261185628199839,0,0,0.655324116390517,0,0.123766352960047,0,2.01697543935533,0.602694528023977,2.19093027116212,0,0,0,0,0,0.136874425072884,0.125542639594803,0,0,0,0,0,0,0,0,0,0,0,0,0,0.200544447470142,0,0,0,0,0.145398238779565,0,0,0.697287110717054,0.411167888021826,0,0.863077176966451,0,0,0.344745680736619,0.645484683583826,0,0.188242339542605,0,0,0.918251677112708,0.641858054152187,0,0.659702600373432,0.199463657621632,0,0.870627715885752,0,0,0.502497330513487,0,0,0.605399502633369,0,0.632924774881769,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.12786256184353,0,0.50133791063589,0.144846518960824,0,0.486634870302636,0,0.221729397462564,0,0.0654895377488563,0,0,0,0,0,0,0,0,1.19257444420023,0,1.04142150482278,2.26123176769604,0.419499436209906,0.825354125820202,0.417989933073621,0.516833518338658,0.35576626268671,0.33472061276467,0.402829317109147,2.28081631715554,0.24406205754817,1.10298924103761,3.24056779152704,0.625098097988558,0,1.35133776579987,1.53316637465883,0.949265659568129,0.732806975721629,0,0,0,6.46063537203914,0.379891534993739,0.132409180813219,0.286836620748814,0.354668382198357,0,0,0.74000264525148,0,0,0.490385709340376,0,0.576175924479999,0,0,0,0.149448680551801,0,0,0,0,0.245668634623536,0.206651562351531,1.18800285728205,1.7308685049499,0,0,0,0,0.277064115484183,1.31693286264251,2.14541457059314,2.55404700141215,0.113432183160021,1.25572744982203,0.640672166455702,0.211931901159562,0.600182192168805,0.618315175430633,0.772921620136887,0.558350568994769,0.506328996723799,0.0974370051611986,0.252433774244115,0.920498986422993,0.161646056818812,0.710019185033229,0.201504196455281,0.169560592310488,0.193260853163297,0,0.573609190778008,0,0,0,0,0,0,1.56449532329816,1.28648187638577,1.38134921352481,0.464367928031979,0,0,0,0,0,0.217879444092406,0.237270619111097,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.100528972411631,0.185176890317059,0,0,0,0,0.234817388471643,0.288732895522148,2.31492756288305,0.951270761172991,0,0,0,0,0,0.93733833986777,0.335964256397719,0.567100388969546,0.268675568108545,0.290633938513962,0.383382679165211,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.26593811658487,0,0,0,0,0.142977993658148,0,0,0,0,0,0,0,0,0,0,0,0.479249710983165,0,0,0.289562613335158,0.205476322550383,0,0,0,0,0,0,0,0,0,0.637938751653163,0,0,0,0.12269149171914,0,0,1.87173775377726,1.96271887676878,2.36553622550902,1.63997980989798,1.20378439891088,2.27407504055985,0,0,0,0.60818530127658,0,0.343143423810856,0,0,0,0,0,0,0.744323423456331,2.455391572609,2.24528075546459,0.512556597022804,1.53512174720011,1.60853921143608,1.48418066444991,0,0,0.0821271560138091,0,0,0,0.601519410909855,0,0.114814448164607,0,0.131124414959424,0,0,0,0,0,1.13733384070897,0.340187410553031,0.215915916102139,1.54227252690289,0,0,0.254876273045038,0,0,0,0,0,0,0,0,0,0,0,0,1.6068392984416,0,0,0,0.137836572484531,0.107420244868274,0,0,0.0890320356467374,0,0.768760269460425,0.765676274967505,0.2023155617111,0,0.31481234683064,0,0,0.532306030317022,0,0,0,0,0,0,0,0,0,0,0.359744915166629,0.274537029736055,0.117812402345686,0.202182481573316,0,0.842516912477962,0,0.487426979262569,0,0.136499911407986,0.282810863907425,0,0,1.99031692572366,0.876901770507525,0,0,0.405820753925408,0.30982349809975,0,0,0.196498082026242,0.35667105148125,0,0.211107635297664,0,0,0,0.865999014529609,0,0,0,0,0,0.443430153536676,0.459446800413919,0,0,0,0,0,0,0,0,0,0.962479855263359,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.43246690842614,0.296964680832639,4.30024982938925,0,0,0,0,0,0,0.276283915531148,0,0,0,0.311039587661807,0.629078458031288,0,0,0.0986434056369336,0,3.33410970433911,0,0,0,0,0.0874599999961957,0,0.1137934482855,0,0,0,0,0,0,0,0,0,0,0,0.10893846351899,0,0,0.113942055847001,0,0,0,0.31900115973192,0.549585560411174,0.533034776018635,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.801588202515337,0,0,0,0,0,0,0.124252535565433,0.235694034616795,0.135904206073614,0,0.815985741090574,0,0,0,0,0.859530882839914,0,0.279282401272254,0,0,0,0,0.223171457441873,0.134366944973453,5.76479813667846,0,0.157566364614447,0,0,0.0984274815147488,0,0,0,0,0,0,0,0,0,0,0,0,0.105600336519406,0,0.575745591958336,0,0,0,0,0,0,0,0,0.340776043570843,0,0,0,0,0,0,0,0.213574825135389,0,0,0,0,0,0.638341257770182,1.08803560673895,0.2506898940227,0.306345576763462,0.327872630709804,0,0,0,0,0,0,0,0,0.37494122388632,0,0,0,0,0,0.149254802886874,0,0,0,0,0,0,0,0,0.295710299979268,0,0,0.155262956876259,0,0,0,0,0,0,0.181848659202559,0,0,0.796191777397232,0.800055529326307,0,0,0,0.192619830407303,0,0,0.453411851024545,0,0,0,0,0,0,0,0,0.256241518587947,0,0,0,0,0,0,0.327609848846413,0.245772908753719,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.4980478571876,0,0,0.352675943690684,0.918736432059601,0,0,0,0,0,0,0,0,0,0.117969723347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| |||
|short_description=p@chr15:39888702..39888705,+ | |||
}} |
Revision as of 22:57, 11 January 2014
Short description: | p@chr15:39888702..39888705, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | No |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr15:39888702..39888705, + |
Coexpression cluster: | C453_hepatic_Ewing_neurofibroma_spindle_tridermal_Olfactory_bone |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
aortic endothelial cell | 2.17e-16 | 6 |
blood vessel endothelial cell | 6.28e-13 | 18 |
embryonic blood vessel endothelial progenitor cell | 6.28e-13 | 18 |
hair follicle dermal papilla cell | 2.28e-12 | 3 |
stem cell of epidermis | 2.28e-12 | 3 |
endothelial cell of vascular tree | 5.81e-12 | 24 |
receptor cell | 3.02e-11 | 6 |
sensory epithelial cell | 3.02e-11 | 6 |
olfactory epithelial cell | 3.02e-11 | 6 |
endothelial cell | 3.68e-11 | 36 |
endothelial cell of artery | 7.60e-11 | 9 |
fat cell | 3.86e-09 | 15 |
thoracic aorta endothelial cell | 3.99e-09 | 2 |
meso-epithelial cell | 1.69e-08 | 45 |
preadipocyte | 2.56e-08 | 12 |
hair follicle cell | 1.33e-07 | 5 |
lining cell | 2.17e-07 | 58 |
barrier cell | 2.17e-07 | 58 |
Ontology term | p-value | n |
---|---|---|
simple squamous epithelium | 4.27e-13 | 22 |
blood vessel endothelium | 6.28e-13 | 18 |
endothelium | 6.28e-13 | 18 |
cardiovascular system endothelium | 6.28e-13 | 18 |
dermal papilla | 2.28e-12 | 3 |
papillary layer of dermis | 2.28e-12 | 3 |
squamous epithelium | 2.47e-11 | 25 |
omentum | 5.71e-11 | 6 |
peritoneum | 5.71e-11 | 6 |
abdominal cavity | 5.71e-11 | 6 |
visceral peritoneum | 5.71e-11 | 6 |
endothelial tube | 7.60e-11 | 9 |
arterial system endothelium | 7.60e-11 | 9 |
endothelium of artery | 7.60e-11 | 9 |
perirenal fat | 2.64e-09 | 2 |
segment of aorta | 3.99e-09 | 2 |
thoracic aorta | 3.99e-09 | 2 |
aorta | 1.80e-08 | 21 |
aortic system | 1.80e-08 | 21 |
hair follicle | 1.33e-07 | 5 |
hair follicle placode | 1.33e-07 | 5 |
Ontology term | p-value | n |
---|---|---|
teratoma | 2.06e-09 | 2 |
peripheral nervous system neoplasm | 6.40e-07 | 3 |