FFCP PHASE1:Hg19::chr15:38545069..38545080,+: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=161742 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=20249 | |||
|TSSclassifier=strong | |||
|UniProt=Q7Z699 | |||
|association_with_transcript=17bp_to_NM_152594,uc001zka.3_5end | |||
|coexpression_cluster_id=C17 | |||
|description=CAGE_peak_10_at_SPRED1_5end | |||
|id=chr15:38545069..38545080,+ | |||
|ontology_enrichment_celltype=CL:0000055!1.96e-08!180;CL:0000680!1.34e-07!57;CL:0000056!1.34e-07!57;CL:0000355!1.34e-07!57 | |||
|ontology_enrichment_celltype_v019=CL:0000235;1.09e-25;6!CL:0000840;5.67e-17;5!CL:0000097;2.29e-11;5!CL:0000990;2.35e-11;8!CL:0000451;2.65e-09;10!CL:0000228;3.96e-07;1!CL:0002568;3.96e-07;1!CL:0002372;3.96e-07;1!CL:0000737;6.78e-07;4 | |||
|ontology_enrichment_celltype_v019_2=CL:0000235,1.16e-25,6;CL:0000840,5.93e-17,5;CL:0001029,5.93e-17,5;CL:0000557,1.88e-12,67;CL:0000990,2.43e-11,8;CL:0000097,3.89e-11,5;CL:0002028,3.89e-11,5;CL:0000839,1.10e-10,66;CL:0000766,1.28e-09,72;CL:0000451,2.71e-09,10;CL:0002009,4.07e-08,61;CL:0000228,2.84e-07,1;CL:0002372,2.84e-07,1;CL:0002568,3.41e-07,1;CL:0000737,5.52e-07,4;CL:0000763,8.20e-07,108;CL:0000049,8.20e-07,108;CL:0002194,8.24e-07,59;CL:0000576,8.24e-07,59;CL:0000040,8.24e-07,59;CL:0000559,8.24e-07,59 | |||
|ontology_enrichment_development_v019=UBERON:0010227;3.96e-07;1 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002385!1.26e-07!63;UBERON:0001015!1.26e-07!63;UBERON:0000383!1.26e-07!63;UBERON:0000467!2.13e-07!625;UBERON:0000468!2.54e-07!659;UBERON:0000480!2.76e-07!626;UBERON:0001134!3.82e-07!61;UBERON:0002036!3.82e-07!61;UBERON:0003082!3.82e-07!61;UBERON:0002204!3.92e-07!167 | |||
|ontology_enrichment_uberon_v019=UBERON:0002426;1.68e-07;1!UBERON:0003831;1.68e-07;1!UBERON:0003898;1.68e-07;1!UBERON:0004830;1.68e-07;1!UBERON:0003830;1.68e-07;1!UBERON:0005175;1.68e-07;1!UBERON:0001774;1.68e-07;1!UBERON:0001103;1.68e-07;1!UBERON:0002079;3.96e-07;1 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002204,1.04e-12,167;UBERON:0002371,1.50e-12,76;UBERON:0003081,5.85e-12,203;UBERON:0001474,1.95e-11,82;UBERON:0004765,3.51e-10,90;UBERON:0002405,9.12e-10,93;UBERON:0002390,3.93e-09,98;UBERON:0003061,3.93e-09,98;UBERON:0001434,6.77e-09,100;UBERON:0000926,1.99e-08,315;UBERON:0004120,1.99e-08,315;UBERON:0006603,1.99e-08,315;UBERON:0002193,4.87e-08,108;UBERON:0002426,1.63e-07,1;UBERON:0003831,1.63e-07,1;UBERON:0003898,1.63e-07,1;UBERON:0004830,1.63e-07,1;UBERON:0003830,1.63e-07,1;UBERON:0005175,1.63e-07,1;UBERON:0001774,1.63e-07,1;UBERON:0001103,1.63e-07,1;UBERON:0010084,1.63e-07,1;UBERON:0002079,2.67e-07,1 | |||
|phase1_expression=0.54503513781167,0.642301571672949,0.140954404095971,0,0,0,0,0.631719873426831,0,0,0,0.218441372130172,0,0.37129905888014,0,0.672325146451775,0,0,0,0,0,0,0,0.136874425072884,0.125542639594803,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.895661896959697,0.647787332037959,0.77272670290256,0.145398238779565,0,0,0,0,0.309706370895104,0,0,0.236482229888585,0,0,0,0,0.272906150057846,0,0,0,0,0,0,0,0,0,0,0.251248665256743,1.0429658368404,0.868755378820466,0.605399502633369,0,0,0.211255286311942,0.425208599930087,0,0,0,0,0.285012743741249,0.39783335439818,0,0,0,0,0,0,0,0,0,0,0,0,0,0.560508562981536,0.263384084775077,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.43806866313962,0.670700859703636,0.383587685530591,0.361439152384566,1.00267582127178,0.724232594804119,0,0.486634870302636,0.472674085820339,0.221729397462564,0.175669571386252,0.196468613246569,0,0,4.86821090482025,6.44280028007289,5.18536046023574,0,0,0,0.596287222100115,0,0,0.56530794192401,0,0,0.626984899610432,0.775250277507987,0,0,0,0.760272105718513,0,0,0,0,0,0.112611480483322,0,0,0,0,0,0,0,0.25326102332916,0.397227542439656,0,0.354668382198357,0.560677600142307,0,0,1.55605517699883,0.134710672069688,0.653847612453835,0,1.15235184896,0,0,0,0.298897361103602,0.117434498643765,0.161872944368132,0.140450806702248,1.02077085627447,0.122834317311768,0.103325781175765,0,0,0,0,0,0.250237039743928,0.277064115484183,0,0.30648779579902,0.150238058906597,0.453728732640084,0,0.213557388818567,0.423863802319124,0.600182192168805,0.103052529238439,0.515281080091258,0.18611685633159,0,0.0974370051611986,0.504867548488229,0.276149695926898,0.161646056818812,0.355009592516614,0.10075209822764,0.169560592310488,0.193260853163297,0,0.286804595389004,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.171567810298526,0.219500570817251,0,0,0,0,0,0,0,0.234817388471643,0,0,0,0,0,3.20082107913617,2.80805118167085,2.37809859661965,0.93733833986777,0,0,0.0895585227028483,0,0,12.3165809473986,1.05658120815871,0.414656231081544,0.144119953416961,1.00993946741104,0.063497894292169,0.381988425558278,0,0,0.102827492703324,0,0.571652865261156,0.224262168690721,0.43596006883328,0.1466765716419,1.16344544182,0,0.845302752556,0.26593811658487,1.04007436911366,0,0,0,0,0,0,0,0.355391948742546,0,0.904318131178758,0.871533458600294,0.399891964728228,0,2.00902836572851,4.21667878966063,0.239624855491583,0,1.42636905040718,0.434343920002738,0.821905290201534,0.358121926479791,0,0,0,0,0.508189248444927,0,0,0,0.637938751653163,0,0,0,0,0,0,0.623912584592421,0.178428988797162,0,0.468565659970853,0.300946099727719,0,0,0,0,0.60818530127658,0,0,0,0,0,0,0,0,0,0.306923946576125,0.280660094433074,0,0.511707249066704,0,0,0.308419387605311,0.532685175939381,0.657017248110473,0,1.16210378459959,0,0.802025881213139,0,0,0.182091168006717,0.262248829918848,0,0.0770153371044148,0,0,0,1.13733384070897,0.170093705276516,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.574265537996172,0,0,0,0,0.307007349452259,0.137836572484531,0.322260734604821,0,0.255679882248303,0.178064071293475,0,0,0.127612712494584,0,0.464845549297286,0.62962469366128,0,0,0,1.73986598415015,0.18532421910392,0.572499546967965,1.116475108079,0,0.762520775695299,0,0,0.95460974377781,0,0,0,0,0.202182481573316,0,0.842516912477962,0,1.21856744815642,0,0.272999822815972,0.565621727814851,0,0.551365343546124,1.32687795048244,0.438450885253763,0.578775534266688,0.655894752046633,0,0.30982349809975,0,0.430234056612155,0.294747123039363,1.07001315444375,0.354761064070598,0.633322905892992,0,0,0,0.0962221127255121,0,1.08890984861323,0.0941438007767792,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.73254089635947,0,0,0,0,0,0,0.994147647766298,0,0.222617410045812,0.16480387422676,0.63337622438398,0.19924798825107,0,0,0,0,0.311039587661807,0.179736702294654,0,0,0,0,0,0.969332746095218,0,0,0,0.0874599999961957,0,0,0.254253650292766,0,0,0,0,0,0.241192877250816,1.52581736317083,0.552896299656123,0,0,0,0.139423744278603,0.230850775511391,0.113942055847001,0,0,0,0,0.183195186803725,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.176915129006678,0,0,0,0,0.269604531922708,2.40773294189637,0.468528891450678,0,0,0,0,0,0,0.379119477770928,0,0.103688191397247,0,0,0.313932918407225,0,0,0,0,0.293977192243133,0.0870592065804026,0,0,0,0,0,0.290967049465258,0.0882561266915003,0.225980740780532,0.137041924646751,0,0.379864775735272,0,0,0.640358984218058,0,0,0.114536596165916,0,0,0.124252535565433,0,0.135904206073614,0,0,0,0,0.410716136675979,0,0,0,0,0.229160424011684,0.717873024576814,0,0.429226048136571,0.223171457441873,0.201550417460179,0,0,0,0,0,0.0984274815147488,0,0,0,0.321506296930038,0,0,0,2.32140586367385,0.364497339948148,0,0.157611414598396,0.157363764404994,0.105600336519406,0,0,1.42939065274673,0,0.25426853765475,0,0,0.653174720218818,0,0.082092520749339,0,0.113312091520126,0,0,0.258565912723101,0.13223260174269,0,0.704815022316672,0.106787412567695,0.943225830597996,0.414239055347196,0.496166021811951,0,0,0,0,0.501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| |||
|short_description=p10@SPRED1 | |||
}} |
Revision as of 22:50, 11 January 2014
Short description: | p10@SPRED1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_10_at_SPRED1_5end |
Coexpression cluster: | C17_Mast_CD14_Monocytederived_Lymphatic_Smooth_mesenchymal_Macrophage |
Association with transcript: | 17bp_to_NM_152594, uc001zka.3_5end |
EntrezGene: | SPRED1 |
HGNC: | 20249 |
UniProt: | Q7Z699 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
macrophage | 1.16e-25 | 6 |
immature conventional dendritic cell | 5.93e-17 | 5 |
common dendritic progenitor | 5.93e-17 | 5 |
granulocyte monocyte progenitor cell | 1.88e-12 | 67 |
conventional dendritic cell | 2.43e-11 | 8 |
mast cell | 3.89e-11 | 5 |
basophil mast progenitor cell | 3.89e-11 | 5 |
myeloid lineage restricted progenitor cell | 1.10e-10 | 66 |
myeloid leukocyte | 1.28e-09 | 72 |
dendritic cell | 2.71e-09 | 10 |
macrophage dendritic cell progenitor | 4.07e-08 | 61 |
multinucleate cell | 2.84e-07 | 1 |
myotube | 2.84e-07 | 1 |
mesenchymal stem cell of Wharton's jelly | 3.41e-07 | 1 |
striated muscle cell | 5.52e-07 | 4 |
myeloid cell | 8.20e-07 | 108 |
common myeloid progenitor | 8.20e-07 | 108 |
monopoietic cell | 8.24e-07 | 59 |
monocyte | 8.24e-07 | 59 |
monoblast | 8.24e-07 | 59 |
promonocyte | 8.24e-07 | 59 |
Ontology term | p-value | n |
---|---|---|
musculoskeletal system | 1.04e-12 | 167 |
bone marrow | 1.50e-12 | 76 |
lateral plate mesoderm | 5.85e-12 | 203 |
bone element | 1.95e-11 | 82 |
skeletal element | 3.51e-10 | 90 |
immune system | 9.12e-10 | 93 |
hematopoietic system | 3.93e-09 | 98 |
blood island | 3.93e-09 | 98 |
skeletal system | 6.77e-09 | 100 |
mesoderm | 1.99e-08 | 315 |
mesoderm-derived structure | 1.99e-08 | 315 |
presumptive mesoderm | 1.99e-08 | 315 |
hemolymphoid system | 4.87e-08 | 108 |
chest muscle | 1.63e-07 | 1 |
respiratory system muscle | 1.63e-07 | 1 |
skeletal muscle of trunk | 1.63e-07 | 1 |
respiratory system skeletal muscle | 1.63e-07 | 1 |
thoracic segment muscle | 1.63e-07 | 1 |
chest organ | 1.63e-07 | 1 |
muscle of trunk | 1.63e-07 | 1 |
diaphragm | 1.63e-07 | 1 |
future diaphragm | 1.63e-07 | 1 |
left cardiac atrium | 2.67e-07 | 1 |