FFCP PHASE1:Hg19::chr15:38544301..38544345,+: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=161742 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=20249 | |||
|TSSclassifier=weak | |||
|UniProt=Q7Z699 | |||
|association_with_transcript=-181bp_to_ENST00000299084_5end | |||
|description=CAGE_peak_3_at_SPRED1_5end | |||
|id=chr15:38544301..38544345,+ | |||
|ontology_enrichment_celltype=CL:0000055!1.92e-15!180;CL:0000393!1.77e-09!60;CL:0000211!1.77e-09!60;CL:0000680!8.18e-09!57;CL:0000056!8.18e-09!57;CL:0000355!8.18e-09!57;CL:0000187!9.32e-08!54;CL:0000183!2.81e-07!59 | |||
|ontology_enrichment_celltype_v019= | |||
|ontology_enrichment_celltype_v019_2=CL:0000393,2.32e-10,61;CL:0000211,2.32e-10,61;CL:0000680,1.24e-09,58;CL:0000056,1.24e-09,58;CL:0000355,1.24e-09,58;CL:0000187,1.77e-08,55 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000468!5.52e-20!659;UBERON:0001017!3.20e-19!82;UBERON:0005743!1.53e-18!86;UBERON:0000922!6.18e-18!612;UBERON:0002616!6.78e-18!59;UBERON:0001049!1.04e-17!57;UBERON:0005068!1.04e-17!57;UBERON:0006241!1.04e-17!57;UBERON:0007135!1.04e-17!57;UBERON:0000467!1.89e-17!625;UBERON:0000480!2.52e-17!626;UBERON:0003075!5.35e-17!86;UBERON:0007284!5.35e-17!86;UBERON:0002050!4.31e-16!605;UBERON:0005423!4.31e-16!605;UBERON:0000923!6.77e-16!604;UBERON:0005291!6.77e-16!604;UBERON:0006598!6.77e-16!604;UBERON:0002532!6.77e-16!604;UBERON:0002346!1.05e-15!90;UBERON:0000073!1.76e-15!94;UBERON:0001016!1.76e-15!94;UBERON:0002020!3.49e-14!34;UBERON:0003528!3.49e-14!34;UBERON:0001893!3.56e-14!34;UBERON:0000955!4.29e-14!69;UBERON:0006238!4.29e-14!69;UBERON:0003080!5.68e-14!42;UBERON:0002780!1.28e-13!41;UBERON:0001890!1.28e-13!41;UBERON:0006240!1.28e-13!41;UBERON:0002791!1.34e-13!33;UBERON:0001869!2.08e-13!32;UBERON:0007023!6.30e-13!115;UBERON:0000033!1.64e-12!123;UBERON:0004121!1.90e-12!169;UBERON:0002204!1.96e-12!167;UBERON:0003056!4.06e-12!61;UBERON:0000924!8.22e-12!173;UBERON:0006601!8.22e-12!173;UBERON:0000153!9.68e-12!129;UBERON:0007811!9.68e-12!129;UBERON:0000062!2.99e-11!511;UBERON:0000475!3.46e-11!365;UBERON:0000914!4.57e-11!83;UBERON:0002329!4.57e-11!83;UBERON:0003077!4.57e-11!83;UBERON:0003059!4.57e-11!83;UBERON:0007282!4.57e-11!83;UBERON:0009618!4.57e-11!83;UBERON:0007285!4.57e-11!83;UBERON:0004290!5.14e-11!70;UBERON:0000119!5.45e-11!312;UBERON:0000483!5.88e-11!309;UBERON:0000956!2.01e-09!25;UBERON:0000203!2.01e-09!25;UBERON:0002619!3.30e-09!22;UBERON:0002385!4.23e-09!63;UBERON:0001015!4.23e-09!63;UBERON:0000383!4.23e-09!63;UBERON:0001134!8.26e-09!61;UBERON:0002036!8.26e-09!61;UBERON:0003082!8.26e-09!61;UBERON:0000486!1.07e-08!82;UBERON:0001950!1.35e-08!20;UBERON:0000481!1.84e-08!347;UBERON:0000477!3.24e-08!286;UBERON:0000025!9.10e-08!194;UBERON:0004111!6.81e-07!241 | |||
|ontology_enrichment_uberon_v019=UBERON:0003528;4.81e-13;34!UBERON:0002020;4.81e-13;34!UBERON:0001893;5.80e-13;34!UBERON:0001869;7.09e-13;32!UBERON:0002791;9.32e-13;32!UBERON:0002780;9.83e-11;41!UBERON:0001890;9.83e-11;41!UBERON:0000956;5.79e-10;25!UBERON:0000203;5.79e-10;25!UBERON:0000073;7.08e-10;53!UBERON:0002616;7.08e-10;53!UBERON:0002619;1.30e-09;22!UBERON:0001950;5.79e-09;20!UBERON:0001017;1.56e-07;75!UBERON:0000125;7.52e-07;9!UBERON:0002308;7.52e-07;9 | |||
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| |||
|short_description=p3@SPRED1 | |||
}} |
Revision as of 22:50, 11 January 2014
Short description: | p3@SPRED1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | No |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_3_at_SPRED1_5end |
Coexpression cluster: | NA |
Association with transcript: | -181bp_to_ENST00000299084_5end |
EntrezGene: | SPRED1 |
HGNC: | 20249 |
UniProt: | Q7Z699 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
electrically responsive cell | 2.32e-10 | 61 |
electrically active cell | 2.32e-10 | 61 |
muscle precursor cell | 1.24e-09 | 58 |
myoblast | 1.24e-09 | 58 |
multi-potent skeletal muscle stem cell | 1.24e-09 | 58 |
muscle cell | 1.77e-08 | 55 |