FFCP PHASE1:Hg19::chr14:79746425..79746463,+: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
Line 1: | Line 1: | ||
{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=9369 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=8010 | |||
|TSSclassifier=strong | |||
|UniProt= | |||
|association_with_transcript=-142bp_to_ENST00000555387_5end | |||
|coexpression_cluster_id=C11 | |||
|description=CAGE_peak_8_at_NRXN3_5end | |||
|id=chr14:79746425..79746463,+ | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019=CL:0002615;1.32e-16;3!CL:0002568;6.42e-13;1!CL:0002581;6.42e-13;1!CL:0000313;6.42e-13;1!CL:0000123;4.29e-07;2!CL:0000159;4.29e-07;2!CL:0000242;4.29e-07;2 | |||
|ontology_enrichment_celltype_v019_2=CL:0002615,1.74e-16,3;CL:0002581,4.23e-13,1;CL:0000313,6.06e-13,1;CL:0002568,7.68e-13,1;CL:0000242,3.93e-07,2;CL:0000159,4.17e-07,2 | |||
|ontology_enrichment_development_v019=UBERON:0006215;1.01e-36;3!UBERON:0005754;2.95e-13;1!UBERON:0007297;2.91e-07;2 | |||
|ontology_enrichment_disease=DOID:2394!8.83e-09!14 | |||
|ontology_enrichment_disease_v019=DOID:2152;6.42e-13;1!DOID:3369;6.42e-13;1!DOID:2394;4.06e-08;14 | |||
|ontology_enrichment_disease_v019_2=DOID:3369,3.76e-13,1;DOID:2152,6.06e-13,1;DOID:2394,4.06e-08,14 | |||
|ontology_enrichment_uberon=UBERON:0001049!2.65e-22!57;UBERON:0005068!2.65e-22!57;UBERON:0006241!2.65e-22!57;UBERON:0007135!2.65e-22!57;UBERON:0002616!2.65e-21!59;UBERON:0001017!7.69e-19!82;UBERON:0005743!2.58e-18!86;UBERON:0000955!2.90e-18!69;UBERON:0006238!2.90e-18!69;UBERON:0003075!1.65e-17!86;UBERON:0007284!1.65e-17!86;UBERON:0002780!9.27e-17!41;UBERON:0001890!9.27e-17!41;UBERON:0006240!9.27e-17!41;UBERON:0000073!3.60e-16!94;UBERON:0001016!3.60e-16!94;UBERON:0003080!3.63e-16!42;UBERON:0002346!3.83e-16!90;UBERON:0007023!1.44e-15!115;UBERON:0001893!1.29e-14!34;UBERON:0002791!7.68e-14!33;UBERON:0002020!2.57e-13!34;UBERON:0003528!2.57e-13!34;UBERON:0001869!7.04e-13!32;UBERON:0000956!8.72e-12!25;UBERON:0000203!8.72e-12!25;UBERON:0003056!2.43e-11!61;UBERON:0004121!2.69e-10!169;UBERON:0000924!1.02e-09!173;UBERON:0006601!1.02e-09!173;UBERON:0000033!1.81e-09!123;UBERON:0002619!2.50e-09!22;UBERON:0001950!2.88e-09!20;UBERON:0000064!5.06e-09!219;UBERON:0000153!1.71e-08!129;UBERON:0007811!1.71e-08!129;UBERON:0000025!2.04e-08!194;UBERON:0003076!2.19e-07!15;UBERON:0003057!2.19e-07!15;UBERON:0004111!3.68e-07!241;UBERON:0000062!3.97e-07!511;UBERON:0000991!9.17e-07!21;UBERON:0009196!9.17e-07!21;UBERON:0009117!9.17e-07!21;UBERON:0005564!9.17e-07!21 | |||
|ontology_enrichment_uberon_v019=UBERON:0002037;1.01e-18;6!UBERON:0003688;4.19e-18;6!UBERON:0002358;4.19e-18;6!UBERON:0003684;4.19e-18;6!UBERON:0001178;4.19e-18;6!UBERON:0000998;2.95e-13;1!UBERON:0006868;2.95e-13;1!UBERON:0004911;6.42e-13;1!UBERON:0002680;1.10e-12;9!UBERON:0001895;1.10e-12;9!UBERON:0004457;2.81e-12;9!UBERON:0000042;2.81e-12;9!UBERON:0004733;1.19e-09;12!UBERON:0002028;1.19e-09;12!UBERON:0004732;6.02e-09;13!UBERON:0004909;4.29e-07;2!UBERON:0005406;4.29e-07;2 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002037,1.02e-18,6;UBERON:0006215,1.02e-18,6;UBERON:0003688,5.96e-18,6;UBERON:0002358,5.96e-18,6;UBERON:0003684,5.96e-18,6;UBERON:0001178,5.96e-18,6;UBERON:0000998,2.95e-13,1;UBERON:0006868,2.95e-13,1;UBERON:0004911,6.06e-13,1;UBERON:0002680,1.10e-12,9;UBERON:0001895,1.10e-12,9;UBERON:0010092,1.10e-12,9;UBERON:0004733,1.19e-09,12;UBERON:0002028,1.19e-09,12;UBERON:0007277,1.19e-09,12;UBERON:0004457,2.84e-09,12;UBERON:0000042,2.84e-09,12;UBERON:0004732,6.03e-09,13;UBERON:0003076,8.08e-08,15;UBERON:0003057,8.08e-08,15;UBERON:0005406,3.48e-07,2;UBERON:0004909,4.17e-07,2 | |||
|phase1_expression=0.908391896352783,0,0.563817616383885,1.0007329835313,2.68176656656373,0.872338524100369,0,0,0,0,0,0.218441372130172,0,0,0,0,0,2.19093027116212,0,0.123121058076788,0,0,0.286235987131057,0.547497700291537,0.125542639594803,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.283604451492204,0.221729397462564,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.367663080345869,0,0,0,0,0,0,0,0,0,0,1.49091585508596,0,0,0,0,0,1.06748995729705,0,0,0,0,0.302714855289863,0,0,0,0,0,0,0,0,0,0,0,0,0,0.910161361938026,0,0,0,0,0,0,0,0.113432183160021,0,0.213557388818567,0,0,0,0.257640540045629,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.10366105501537,0,0.36497735907583,0,0,0,0,0,0,0.168584690078102,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.112131084345361,0,0,1.16344544182,0,0,0,0,0,0,0,0.428933980974443,0,0,0,0.355391948742546,0,0.301439377059586,0,0.199945982364114,0,0,0,0.239624855491583,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.207970861530807,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.303127571446259,0,0,0,0.153461973288062,0,0.128139149255701,0,1.12597744800525,1.48418066444991,0,0,0,0,0,0.120859449591622,0,0,0.114814448164607,0,0,0,0.0770153371044148,0,0,0,0,0,0.215915916102139,0,0,0.501689773854853,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.632758849437452,0,0,0,0,0,0.179872457583315,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.405820753925408,0.30982349809975,0,0,0.196498082026242,0.35667105148125,0,0,0,0,0,0,0,0,0.0941438007767792,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.71623345421307,0.296964680832639,0.307160702099232,0.994147647766298,0.703347082052564,0,0,0,0,0,0,0.20453736500431,0,0,0,0,0,0.0986434056369336,0,0,0,0,0,0,0.0874599999961957,0,0,0,0,0,0,0.520874984799877,0,0.120596438625408,3.05163472634166,6.96649337566715,7.38869047383869,0.438770794307945,0,0,0.153900517007594,0,0,0,0.108647371922008,0.31900115973192,0.0915975934018623,0,0,0,0,0,0,0,0,0,0,0,0.141353071433941,0,0.995261931078505,0.0884575645033392,0.611030144933625,0,0,0,0.202203398942031,0,0.702793337176017,0,0,0,0.789168805698781,0,0,0,0.150323419414493,0.414752765588989,0,0,0,0,0,0,0,0,0.0870592065804026,0.17472666824203,0,0,0,0,0.387956065953678,0,0.225980740780532,0,0,0.126621591911757,0,0,0.213452994739353,0,0,0,0,0,0,0,0.135904206073614,0,0,0,0,0,0,0.429765441419957,0,0,0,0.717873024576814,0,0,0,0,0.720599767084807,0,0,0,0,0,0,0,0.136203406111576,0.321506296930038,0.275078873194468,0,0,0,0.121499113316049,0,0,0.0524545881349981,0,0.179287339332845,0,0.714695326373367,0,0,0,0,0,0,0,0,0,0,0,0,0.26446520348538,0,0,0,0.157204305099666,0,0,0,0,0,0,0,0,0,0.157054096250234,0,0.854183854313742,0.500763722825999,0,0.776503360757966,0.0620964029413835,0,0,0,0,0,1.40500471742064,0.724605143054126,0,0.233713309847224,0,0,0,0,0,0.151230923763239,0,0,0.159296767163702,0,0.621051827505038,0,4.51930914748591,0.521745061811734,1.20206087197775,0,0.813741466409323,0.181848659202559,0.644463342254931,0,0.398095888698616,0,0,0,0,0.192619830407303,0,0,0,0.463044948647668,0,0.71635536432595,0,0.219284049578707,0.176689145945881,0.192914038270915,0,0.256241518587947,0,0.303859956177382,0.138258436151731,0,0,0,0,0.245772908753719,0,0,0,0,0,0,0,0,0.127894371303652,0,0,0,0,0,0,0,0,0,0,0,0,0.128458450192919,0,0.638535436228605,0.205116364240755,0.756215088665154,0.138314504928436,0.161475645631851,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.202612753855184,0.781078098613847,0,0,0.546974809018219,0,0,0,0,0,0,0,0.682986574053893,0.0887023701626388,0,0,0.339848664884159,0,0,0.111231401892069,0,0.314231179832004,0,0,0,0,0.142953088353313,0,0,0,0,0,0,0,0.430227358820278,0,0,2.54032230114557,0.22910686854405,0,0,1.23040974977572,0,0,0,0,0,0,0,0,0,0.33883824611688,0,0,0.154348316215889,0.218559560503957,0,0,0,0.196308467114945,0,0.4226557275834,0,0,0,0.0999411559249289,0,0,0,1.46067277649303,0,0.573358332605805,0.315543124386369,0.135982980381829,0,0.5290268405154,0,0,0,0,0,0,0,0.26721740526556,0.18378979906969,0.250707539292375,0.151557396436479,0,0.829169439458779,0.413731983447581,0,0,0,0,0,0,0,0,0,0,0.215166616178029,0,0,0,0,0,0,0.733448665097199,0.406896178315738,0,0.201273793591026,0 | |||
|short_description=p8@NRXN3 | |||
}} |
Revision as of 21:16, 11 January 2014
Short description: | p8@NRXN3 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_8_at_NRXN3_5end |
Coexpression cluster: | C11_cerebellum_medulla_pons_parietal_occipital_middle_medial |
Association with transcript: | -142bp_to_ENST00000555387_5end |
EntrezGene: | NRXN3 |
HGNC: | 8010 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
adipocyte of omentum tissue | 1.74e-16 | 3 |
perirenal preadipocyte | 4.23e-13 | 1 |
serous secreting cell | 6.06e-13 | 1 |
mesenchymal stem cell of Wharton's jelly | 7.68e-13 | 1 |
Merkel cell | 3.93e-07 | 2 |
seromucus secreting cell | 4.17e-07 | 2 |
Ontology term | p-value | n |
---|---|---|
cerebellum | 1.02e-18 | 6 |
rhombic lip | 1.02e-18 | 6 |
omentum | 5.96e-18 | 6 |
peritoneum | 5.96e-18 | 6 |
abdominal cavity | 5.96e-18 | 6 |
visceral peritoneum | 5.96e-18 | 6 |
seminal vesicle | 2.95e-13 | 1 |
seminal fluid secreting gland | 2.95e-13 | 1 |
epithelium of female gonad | 6.06e-13 | 1 |
regional part of metencephalon | 1.10e-12 | 9 |
metencephalon | 1.10e-12 | 9 |
future metencephalon | 1.10e-12 | 9 |
segmental subdivision of hindbrain | 1.19e-09 | 12 |
hindbrain | 1.19e-09 | 12 |
presumptive hindbrain | 1.19e-09 | 12 |
cavity lining | 2.84e-09 | 12 |
serous membrane | 2.84e-09 | 12 |
segmental subdivision of nervous system | 6.03e-09 | 13 |
posterior neural tube | 8.08e-08 | 15 |
chordal neural plate | 8.08e-08 | 15 |
perirenal fat | 3.48e-07 | 2 |
epithelium of gonad | 4.17e-07 | 2 |
Ontology term | p-value | n |
---|---|---|
peripheral primitive neuroectodermal tumor | 3.76e-13 | 1 |
ovary epithelial cancer | 6.06e-13 | 1 |
ovarian cancer | 4.06e-08 | 14 |