FFCP PHASE1:Hg19::chr14:68286478..68286514,+: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=5890 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=9822 | |||
|TSSclassifier=strong | |||
|UniProt=F8WAY6,C9JYJ0,O15315 | |||
|association_with_transcript=0bp_to_ENST00000479335,ENST00000487861,NM_002877,NM_133509,NM_133510,uc001xkd.2,uc001xke.2,uc001xkf.1,uc001xkg.1,uc010aqq.2,uc010aqr.2,uc010aqs.1_5end | |||
|description=CAGE_peak_2_at_RAD51B_5end | |||
|id=chr14:68286478..68286514,+ | |||
|ontology_enrichment_celltype=CL:0000542!1.54e-15!53;CL:0000051!1.54e-15!53;CL:0000838!1.73e-15!52;CL:0000037!5.92e-14!172;CL:0000566!5.92e-14!172;CL:0000988!7.58e-14!182;CL:0000738!2.36e-13!140;CL:0002032!1.26e-11!165;CL:0000837!1.26e-11!165;CL:0002031!1.61e-11!124;CL:0002087!2.57e-11!119;CL:0000945!5.42e-10!24;CL:0000826!5.42e-10!24;CL:0000791!9.83e-08!18;CL:0000789!9.83e-08!18;CL:0002420!9.83e-08!18;CL:0002419!9.83e-08!18;CL:0000790!9.83e-08!18 | |||
|ontology_enrichment_celltype_v019=CL:0000945;1.71e-09;24!CL:0000542;4.32e-09;53!CL:0000791;5.82e-08;18!CL:0000789;5.82e-08;18!CL:0002419;5.82e-08;18 | |||
|ontology_enrichment_celltype_v019_2=CL:0000542,3.53e-16,53;CL:0000051,3.53e-16,53;CL:0000838,4.03e-16,52;CL:0000988,4.92e-15,177;CL:0000037,5.79e-15,168;CL:0000738,6.10e-15,136;CL:0002031,1.71e-12,120;CL:0002032,1.84e-12,161;CL:0000837,1.84e-12,161;CL:0002087,1.92e-12,115;CL:0000945,1.65e-10,24;CL:0000826,1.65e-10,24;CL:0000791,4.11e-08,18;CL:0000789,4.11e-08,18;CL:0002420,4.11e-08,18;CL:0002419,4.11e-08,18;CL:0000790,4.11e-08,18 | |||
|ontology_enrichment_development_v019=CL:0000051;4.32e-09;53!CL:0000790;5.82e-08;18 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon= | |||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2= | |||
|phase1_expression=0.54503513781167,0,0.563817616383885,2.00146596706261,0,0,0,0,0.522371256399677,0.245733936501509,0.697801167972428,0.873765488520689,0.263766978228454,0.74259811776028,0.662794751455832,0.672325146451775,0,0,0,1.10808952269109,0.408001382488506,0.626909442956176,1.71741592278634,1.50561867580173,0.87879847716362,4.04991050464142,3.03772180964799,2.75487734597877,2.36018566109342,3.0706351847777,1.70297735647684,0,0,0.739508020333575,4.49309763365749,4.83375390457233,4.9912074686924,4.43196326825502,2.00544447470142,3.25516306073778,2.01523926815932,2.91504299417082,3.8636335145128,1.16318591023652,0.755751887377619,0.485168122375632,0.697287110717054,0.822335776043652,0.929119112685311,0.863077176966451,1.7931249457037,2.60130452877444,0.344745680736619,1.93645405075148,1.35426486594342,0.564727018627814,0,1.12361742222542,0.612167784741805,0.641858054152187,3.19668562899521,0.329851300186716,0.598390972864896,1.27867425159808,0.580418477257168,0,1.86846674698672,1.00499466102697,1.5644487552606,1.52032191293582,0.605399502633369,1.10483290796269,0.949387162322653,1.47878700418359,1.91343869968539,2.72556239160889,1.46027220490444,1.80212271409808,2.57160938715328,1.71007646244749,3.58050018958362,3.10529061399878,3.51992488922645,3.82297027883492,1.77901850772711,5.9742231159311,4.80475184443215,5.17277195959035,3.96626923670917,1.90810750907073,2.27685187643779,1.17447437874188,6.88091810625412,6.60856642895129,1.68152568894461,2.63384084775077,3.73748563216283,1.96505381374582,2.2616164889946,3.17654341242288,4.88883399950386,6.62826928028627,1.94826728407911,3.45372416344038,2.3568472597987,3.1014745241707,7.58250818542044,1.5370958367081,2.08094956095805,2.63100647365882,2.21080014228679,2.60822777161547,3.41059095272739,5.88589821797369,5.22677619024884,2.60611488204402,2.68254345521345,4.81078423675682,4.80737414837055,5.09704662918555,4.55758417699493,1.90090408889675,5.42070428679982,6.14335733541208,1.24930726552346,4.49876778883632,3.28451198768419,4.43534835094411,2.40696176205157,4.05508330871837,0,0.670700859703636,0.895037932904712,0.722878304769133,0.50133791063589,1.30361867064741,0,1.45990461090791,1.41802225746102,0.886917589850256,1.14185221401064,2.22664428346111,0,0.370784442784429,2.92092654289215,3.13433527138681,2.79211717089617,4.76981248610684,2.85997455390064,3.71457501329565,1.19257444420023,1.72046919021225,0.694281003215189,0,1.25849830862972,0.275118041940067,0.417989933073621,2.58416759169329,2.49036383880697,1.67360306382335,2.01414658554573,1.52054421143703,0.488124115096339,1.47065232138347,0,1.69669483739752,1.12264686313085,0.675668882899933,1.53316637465883,1.89853131913626,0.366403487860815,0,0,0,0.496971951695318,1.13967460498122,2.64818361626438,1.72101972449288,0.354668382198357,0.560677600142307,0,0,0.622422070799533,1.34710672069688,1.30769522490767,0.908144565869588,0.576175924479999,0.468642863667593,1.24864030732128,2.2818872861778,0.149448680551801,1.64408298101271,2.5899671098901,2.10676210053373,1.63323337003915,0.737005903870608,1.34323515528495,1.18800285728205,0.494533858557114,0,0,1.0100166837244,2.00189631795143,1.38532057742091,0.438977620880838,0.30648779579902,0.150238058906597,0.907457465280168,2.15267562826634,0.427114777637135,0.847727604638247,1.80054657650641,1.23663035086127,2.31876486041066,0.930584281657949,2.70042131586026,1.65642908774038,3.28163906517349,1.10459878370759,1.45481451136931,2.4850671476163,1.20902517873168,1.18692414617341,0.57978255948989,0.818238361772504,0.286804595389004,1.58565817968474,0.530119073285941,1.39432731443422,2.28054321033815,1.26160425437814,2.18986415445498,3.12899064659632,0,1.38134921352481,0.928735856063958,3.60939740834793,1.0647612003586,0.842923450390509,0.723033089650446,0.882351781859152,0.217879444092406,0.474541238222193,0.943819157121151,0.98110732562673,1.15424147083917,1.4763109092493,0,0.4115740113314,0,1.26755034821831,0.982827216677626,0,6.62194649121976,0.737930631258681,1.20097467208968,0.548751427043128,1.1240175325762,0.703702806881416,1.20364978706088,0.977424915930974,0,4.3299402607582,0.463721619900307,0.352226082707465,0.577465791044295,0.925971025153221,1.14152491340759,3.95102198979638,0,1.72351904261178,1.40402559083543,2.37809859661965,0.93733833986777,0.839910640994298,0.425325291727159,0.895585227028483,0.581267877027924,1.15014803749563,2.46331618947972,1.49682337822484,3.31724984865235,2.88239906833923,2.90357596880674,2.09543051164158,1.14596527667483,1.17217447210047,0,1.02827492703324,0.901029173531752,0.571652865261156,0.336393253036082,0,0.36669142910475,0.517086863031111,3.57656445851882,0.845302752556,0.531876233169741,2.08014873822732,0.257207374262142,1.41849132023278,0,0.142977993658148,1.08524321078289,0.823240336780769,0.977208552881205,0.710783897485092,0,0.904318131178758,0,0.399891964728228,1.2162378064119,1.50677127429638,0,1.4377491329495,1.14861935834114,0,1.59259437334337,0.61642896765115,1.07436577943937,2.12961773587702,2.955461403028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| |||
|short_description=p2@RAD51B | |||
}} |
Revision as of 20:42, 11 January 2014
Short description: | p2@RAD51B |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_2_at_RAD51B_5end |
Coexpression cluster: | NA |
Association with transcript: | 0bp_to_ENST00000479335, ENST00000487861, NM_002877, NM_133509, NM_133510, uc001xkd.2, uc001xke.2, uc001xkf.1, uc001xkg.1, uc010aqq.2, uc010aqr.2, uc010aqs.1_5end |
EntrezGene: | RAD51B |
HGNC: | 9822 |
UniProt: | F8WAY6C9JYJ0O15315 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
lymphocyte | 3.53e-16 | 53 |
common lymphoid progenitor | 3.53e-16 | 53 |
lymphoid lineage restricted progenitor cell | 4.03e-16 | 52 |
hematopoietic cell | 4.92e-15 | 177 |
hematopoietic stem cell | 5.79e-15 | 168 |
leukocyte | 6.10e-15 | 136 |
hematopoietic lineage restricted progenitor cell | 1.71e-12 | 120 |
hematopoietic oligopotent progenitor cell | 1.84e-12 | 161 |
hematopoietic multipotent progenitor cell | 1.84e-12 | 161 |
nongranular leukocyte | 1.92e-12 | 115 |
lymphocyte of B lineage | 1.65e-10 | 24 |
pro-B cell | 1.65e-10 | 24 |
mature alpha-beta T cell | 4.11e-08 | 18 |
alpha-beta T cell | 4.11e-08 | 18 |
immature T cell | 4.11e-08 | 18 |
mature T cell | 4.11e-08 | 18 |
immature alpha-beta T cell | 4.11e-08 | 18 |