FFCP PHASE1:Hg19::chr14:64855114..64855123,+: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=4522 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=7432 | |||
|TSSclassifier=strong | |||
|UniProt=G3V3L6 | |||
|association_with_transcript=85bp_to_ENST00000555252_5end | |||
|description=CAGE_peak_3_at_MTHFD1_5end | |||
|id=chr14:64855114..64855123,+ | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019=CL:0000840;1.12e-12;5!CL:0002591;1.26e-09;1!CL:0000990;1.27e-08;8!CL:0000451;3.89e-07;10 | |||
|ontology_enrichment_celltype_v019_2=CL:0000840,6.92e-13,5;CL:0001029,6.92e-13,5;CL:0002591,1.43e-09,1;CL:0000990,9.31e-09,8;CL:0000451,3.02e-07,10 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease=DOID:305!4.26e-08!106 | |||
|ontology_enrichment_disease_v019=DOID:0060060;3.12e-09;1!DOID:0060061;3.12e-09;1!DOID:8691;3.12e-09;1 | |||
|ontology_enrichment_disease_v019_2=DOID:0060060,3.83e-09,1;DOID:0060061,3.83e-09,1;DOID:8691,3.83e-09,1 | |||
|ontology_enrichment_uberon= | |||
|ontology_enrichment_uberon_v019=UBERON:0002107;4.36e-07;19!UBERON:0006925;4.36e-07;19 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002107,4.48e-07,19;UBERON:0006925,4.48e-07,19;UBERON:0008836,4.48e-07,19 | |||
|phase1_expression=0.181678379270557,1.2846031433459,0.281908808191942,0,0,0,0,0,0.261185628199839,0,0,0,0,0,0,0,0,0,0,0.123121058076788,0.204000691244253,0,0,0.136874425072884,0.125542639594803,0.229240217243854,0.164201178899891,0.0787107813136792,0,0,0,0,0,0,0.0774672005803016,0,0.293600439334847,0,0,0,0,0,0,0,0,0,0,0,0,0.575384784644301,0,0.236482229888585,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.111410456885174,0,0,0,0,0,0,0.276350017785848,0.579606171470105,0,0,0,0,0,0,0,0.318565414324097,0,0,0,0,0,0,0,0,0,0.144824403882799,0,0,0.639312809217652,0.361439152384566,0,0,0,0,0,0,0.263504357079378,0.0654895377488563,0,0,3.8945687238562,1.56716763569341,1.59549552622638,0,0,0,0,0,0,0,0,0,0.208994966536811,0,0,0,0.402829317109147,0,0,0,0,0.17859945656816,0.22452937262617,0,0,0,0,0,0,0,0,0.25326102332916,0.264818361626438,0,0,0.560677600142307,0,0,0,0.269421344139376,0.326923806226917,0,0,0,0.312160076830321,0.570471821544449,0.298897361103602,0,0.161872944368132,0,0.204154171254893,0,0,0,0.247266929278557,0,0,0,0.125118519871964,0,0,0,0,0.340296549480063,0.179389635688862,0.213557388818567,0.635795703478686,0.600182192168805,0.206105058476878,0,0,0.675105328965065,0,0.504867548488229,0,0.161646056818812,0,0,0.67824236924195,0,0,0,0.243947412259191,0.397589304964456,0.232387885739037,0,0,0,0,0,0,0,0,0.354920400119532,0.168584690078102,0.482022059766964,0.330881918197182,0.871517776369625,0.71181185733329,1.07865046528132,0.588664395376038,0,0,0,0,0,2.53510069643662,2.94848165003288,1.18157981336281,0,0.368965315629341,0.171567810298526,0.109750285408626,0,0,0,0,0,1.44331342025273,0,0.352226082707465,0.144366447761074,0.462985512576611,0.380508304469197,0,0.858486162094873,0,2.34004265139238,0.148631162288728,0,0,0.283550194484773,0.0895585227028483,0.290633938513962,0,3.94130590316755,0.968532774145487,0,0.288239906833923,0,0.317489471460845,0,0,0,0.308482478109971,0.300343057843917,0,0.112131084345361,0,0.1466765716419,0.129271715757778,0,0,0,0,0.257207374262142,0,0,0,0,0,0.325736184293735,0,0.791951872933429,0.301439377059586,0,0.099972991182057,0,0,0,0.239624855491583,0,0,0.289562613335158,0,0.179060963239896,0,0,0,0,0.508189248444927,0,0,0,0,0,0,0,0,0,0,0.207970861530807,0.178428988797162,0,0.117141414992713,0,0,0,1.32845119707087,0,0.0868836144680828,0,0,0,0,0,0.303127571446259,0,0,0.248107807818777,0.61384789315225,0.280660094433074,0,0,0.160853921143607,0,1.07946785661859,0.177561725313127,0.410635780069046,0,0.116210378459959,0.120859449591622,0,0,0.114814448164607,0.182091168006717,0,0,0.15403067420883,0,0,0,0,0.170093705276516,0,0,0.812839312631559,0,0,0,0.223874754722178,0.219259876645935,1.0457418040996,0.256450125116389,0.656029291399411,0,1.95777922130672,0.183138929636687,0.247528499761764,0,0,0,0.096670718292122,0,0,0,0.214840489736547,0.290033387828457,0,0.267096106940212,0,0,0.127612712494584,0,0,0,0,0,0.532306030317022,0,0,0,0,0.316379424718726,0,0.255897791311334,0,0,0,0.179872457583315,0,0.117812402345686,0,0,0,0,0,0,0.136499911407986,0,2.26016233240486,0,0,0,0,0,0.202910376962704,0,0.563391205064483,0.143411352204052,0,0.7133421029625,0,0,0.329294892959902,0,0,0.0962221127255121,0.670302275535787,0,2.7301702225266,0,0,0,0,0,0,0,0,0,0,0,0,0.213648142254946,0,0.245040215981032,0.371606350251437,0,0,0,0,0,0,0,0,0,0,0,0.169291777801603,0.1605880751037,0,0.425846237690326,0,0.307240764308458,0,0,0.19538809540204,0,0,0,0,0,0.37428108081644,2.05111450980652,0.121360521749513,0,0.852408440419239,0,0,0,0.994147647766298,0,0,0,0.211125408127993,0,0,0.251932747854276,0.102268682502155,0.246169610922139,0,0.269605053441981,0.179021174675609,0,0,0,0,0,0.185536196323703,0,0,0.0874599999961957,0,0,0,0,0,0,0,0,0.241192877250816,0,0.110579259931225,0.295547618953547,0.219385397153973,0.10893846351899,0.278847488557207,0,0.227884111694002,0,0.179515288819544,0.108647371922008,0,0,0,0,0.156980256395025,0,0,0,0,0,0.158936578980379,0.421996129056054,0.163232808159148,0.282706142867882,0,0,0.0884575645033392,0,0,0.988511511572023,1.35748534357092,0.134802265961354,0,0,0,0,0.242780379534093,0,0,0,0,0.60129367765797,0.103688191397247,0,0,0,0,0,0.138674673013139,0.173559738335131,0.391969589657511,0.435296032902013,0.17472666824203,0,0.387025325156341,0.65780385377567,0.246346371159628,0.0969890164884194,0,0.225980740780532,0,0.397429223405979,0.189932387867636,0,0,0,0.19980960958213,0,0.572682980829578,0.171594997861965,0,0.248505071130865,0,0,0.209205692624666,0.305994652908965,1.44475294950759,0,0,0,0,0,0,0.687481272035051,0.717873024576814,0.599037001496973,0.429226048136571,0,0,0,0,0.315132729228895,0.164831716762333,0.471824806979294,0.196854963029498,0.0846733320657845,0,0,0.321506296930038,0.412618309791701,0.83088067605837,0.2249738915515,0,0.182248669974074,0,0.315222829196793,0.209818352539992,0,0,0,0,0,0,0,0,0,0,0.410462603746695,0,0.113312091520126,3.22414914091781,0,0,0,0,0,0.213574825135389,0,0,0,0.395223263795889,0,0,0.544017803369474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| |||
|short_description=p3@MTHFD1 | |||
}} |
Revision as of 20:32, 11 January 2014
Short description: | p3@MTHFD1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_3_at_MTHFD1_5end |
Coexpression cluster: | NA |
Association with transcript: | 85bp_to_ENST00000555252_5end |
EntrezGene: | MTHFD1 |
HGNC: | 7432 |
UniProt: | G3V3L6 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
immature conventional dendritic cell | 6.92e-13 | 5 |
common dendritic progenitor | 6.92e-13 | 5 |
smooth muscle cell of the pulmonary artery | 1.43e-09 | 1 |
conventional dendritic cell | 9.31e-09 | 8 |
dendritic cell | 3.02e-07 | 10 |
Ontology term | p-value | n |
---|---|---|
liver | 4.48e-07 | 19 |
digestive gland | 4.48e-07 | 19 |
liver bud | 4.48e-07 | 19 |
Ontology term | p-value | n |
---|---|---|
non-Hodgkin lymphoma | 3.83e-09 | 1 |
cutaneous T cell lymphoma | 3.83e-09 | 1 |
mycosis fungoides | 3.83e-09 | 1 |