FFCP PHASE1:Hg19::chr14:61748550..61748559,-: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=161291 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=27254 | |||
|TSSclassifier=strong | |||
|UniProt= | |||
|association_with_transcript=0bp_to_ENST00000555868_5end | |||
|description=CAGE_peak_16_at_TMEM30B_5end | |||
|id=chr14:61748550..61748559,- | |||
|ontology_enrichment_celltype=CL:0000136!1.10e-07!15;CL:0000153!2.45e-07!9;CL:0000447!2.45e-07!9 | |||
|ontology_enrichment_celltype_v019=CL:0002616;1.34e-23;1!CL:0000214;1.04e-08;3!CL:0000135;1.35e-08;3!CL:0000388;1.35e-08;3 | |||
|ontology_enrichment_celltype_v019_2=CL:0002616,1.34e-23,1;CL:0000214,9.66e-09,3;CL:0000135,1.51e-08,3;CL:0000388,1.51e-08,3 | |||
|ontology_enrichment_development_v019=UBERON:0010115;2.09e-23;1!UBERON:0010227;4.59e-23;1!UBERON:0004874;4.59e-23;1!UBERON:0006965;1.48e-12;2!UBERON:0006241;1.35e-08;3!UBERON:0003057;1.35e-08;3 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019=DOID:6193;2.09e-23;1!DOID:3350;2.07e-12;2 | |||
|ontology_enrichment_disease_v019_2=DOID:6193,2.62e-23,1;DOID:3350,2.32e-12,2 | |||
|ontology_enrichment_uberon=UBERON:0007023!6.27e-22!115;UBERON:0004457!6.82e-07!12;UBERON:0000042!6.82e-07!12 | |||
|ontology_enrichment_uberon_v019=UBERON:0002363;2.09e-23;1!UBERON:0002079;4.59e-23;1!UBERON:0000989;4.59e-23;1!UBERON:0008811;4.59e-23;1!UBERON:0005406;1.65e-12;2!UBERON:0002360;2.07e-12;2!UBERON:0000094;2.07e-12;2!UBERON:0010743;2.07e-12;2!UBERON:0002081;3.06e-12;2!UBERON:0006915;1.04e-08;3!UBERON:0007616;1.04e-08;3!UBERON:0002217;1.04e-08;3!UBERON:0002018;1.04e-08;3!UBERON:0002240;1.35e-08;3!UBERON:0007846;1.35e-08;3!UBERON:0004151;1.35e-08;3!UBERON:0005174;1.35e-08;3!UBERON:0000043;1.35e-08;3!UBERON:0007845;1.35e-08;3!UBERON:0001137;1.35e-08;3 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002363,2.10e-23,1;UBERON:0007645,2.10e-23,1;UBERON:0007647,2.10e-23,1;UBERON:0010115,2.10e-23,1;UBERON:0000989,3.28e-23,1;UBERON:0008811,3.28e-23,1;UBERON:0006258,3.28e-23,1;UBERON:0005876,3.28e-23,1;UBERON:0004874,3.28e-23,1;UBERON:0002079,4.10e-23,1;UBERON:0005406,1.65e-12,2;UBERON:0002360,2.07e-12,2;UBERON:0000094,2.07e-12,2;UBERON:0010743,2.07e-12,2;UBERON:0002081,2.90e-12,2;UBERON:0010227,2.90e-12,2;UBERON:0006915,9.66e-09,3;UBERON:0007616,9.66e-09,3;UBERON:0002217,9.66e-09,3;UBERON:0002018,9.66e-09,3;UBERON:0004151,1.30e-08,3;UBERON:0002240,1.40e-08,3;UBERON:0005174,1.40e-08,3;UBERON:0001137,1.40e-08,3;UBERON:0007846,1.51e-08,3;UBERON:0000043,1.51e-08,3;UBERON:0007845,1.51e-08,3 | |||
|phase1_expression=0.726713517082227,0.856402095563933,0.140954404095971,0,0.446961094427288,3.48935409640147,0,0,0,0,0,0,0,0.247532705920093,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.722878304769133,0,0.579386075843295,0,0.486634870302636,0,0,0,0.327447688744282,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.247266929278557,0,0,0,0,0,0,0.30648779579902,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.858840442033979,0,0,0,0,0,0,0,0,0,0,0,0.0868836144680828,0,0,0,0,0,0,0,0,0.248107807818777,0,0,0.128139149255701,0,0.160853921143607,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.096670718292122,0,0,0,0,0,0,0,0,0,0,0.10115778085555,0,0,0,0,0,0,0,0,0,0,0.190630193923825,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.30982349809975,0,0,0,0,0,2.74439925886963,0.329294892959902,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.293016358543788,0,0,0,0.47748896947538,0,0,0,0,0,0,0,4.18420775327246,0,0,0,0,0.311039587661807,0.0898683511473268,0,0,0.394573622547734,0,0,0,0.185536196323703,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.219385397153973,0,0,0.307801034015188,0,0,0,0,0.31900115973192,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.176915129006678,0,0,0,0,0.134802265961354,0.802577647298789,0,0,0,0,0,0,0,2.33790344625405,0,0,0,0,0,0,0,0,0,0,0,0.698906672968121,2.23581842213102,0,0,0,0.0969890164884194,0,0.225980740780532,0,0,0.189932387867636,0,0,0.213452994739353,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.279282401272254,0.687481272035051,0,0,0,0,0.0671834724867263,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0607495566580247,0,0.0788057072991982,0.104909176269996,0,0,0,1.42939065274673,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.427149650270779,0,0,0,0,0,0,0,0,0,0.327872630709804,0,0,0,0,0,0.998361463831671,0.248385611765534,0,0,0,0,0,0,0,0,0,0,0,0.251567901752575,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.343395705182793,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.128458450192919,0,0,0,0,0,0,0,0,0.11796972334774,0,0,0,0,0,0.300841313397029,0,0,0,0,0,0,0,0,0.126831620387814,0,0,1.48863353516788,0,0,0,0,0,0,0.0887023701626388,0,0,0,0,0,0,0.156986185701028,0,0,0,0,0,0.0714765441766563,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.098150233615243,0.121917924982269,0,0.102662806856247,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.297046400327086,1.2679671827502,0.169927114687817,0,0,0,0,0,0.401206833445841,0,0,0.143339583151451,0,0.0679914901909147,0,0,1.11598505450025,0,0,0,0,0,0,0,0,0,0.909344378618873,0.267964130156178,0,0,0.639701945702943,0,0,0,0,0.700118741059814,0,0,0.342233301085281,0,0.430333232356058,0.665320713092027,0.0814032686109745,0,0,0,0,0.366724332548599,0,0,0.603821380773079,0 | |||
|short_description=p16@TMEM30B | |||
}} |
Revision as of 20:25, 11 January 2014
Short description: | p16@TMEM30B |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_16_at_TMEM30B_5end |
Coexpression cluster: | NA |
Association with transcript: | 0bp_to_ENST00000555868_5end |
EntrezGene: | TMEM30B |
HGNC: | 27254 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
perirenal adipocyte cell | 1.34e-23 | 1 |
synovial cell | 9.66e-09 | 3 |
fibrocyte | 1.51e-08 | 3 |
tendon cell | 1.51e-08 | 3 |
Ontology term | p-value | n |
---|---|---|
dura mater | 2.10e-23 | 1 |
future meninx | 2.10e-23 | 1 |
ectomeninx | 2.10e-23 | 1 |
future dura mater | 2.10e-23 | 1 |
penis | 3.28e-23 | 1 |
intromittent organ | 3.28e-23 | 1 |
lateral plate mesenchyme | 3.28e-23 | 1 |
undifferentiated genital tubercle | 3.28e-23 | 1 |
somatopleure | 3.28e-23 | 1 |
left cardiac atrium | 4.10e-23 | 1 |
perirenal fat | 1.65e-12 | 2 |
meninx | 2.07e-12 | 2 |
membrane organ | 2.07e-12 | 2 |
meningeal cluster | 2.07e-12 | 2 |
cardiac atrium | 2.90e-12 | 2 |
future cardiac atrium | 2.90e-12 | 2 |
stratified squamous epithelium | 9.66e-09 | 3 |
layer of synovial tissue | 9.66e-09 | 3 |
synovial joint | 9.66e-09 | 3 |
synovial membrane of synovial joint | 9.66e-09 | 3 |
cardiac chamber | 1.30e-08 | 3 |
spinal cord | 1.40e-08 | 3 |
dorsal region element | 1.40e-08 | 3 |
dorsum | 1.40e-08 | 3 |
dense regular connective tissue | 1.51e-08 | 3 |
tendon | 1.51e-08 | 3 |
regular connective tissue | 1.51e-08 | 3 |
Ontology term | p-value | n |
---|---|---|
epithelioid sarcoma | 2.62e-23 | 1 |
mesenchymal cell neoplasm | 2.32e-12 | 2 |