FFCP PHASE1:Hg19::chr14:50361127..50361150,+: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
Line 1: | Line 1: | ||
{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=382 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=novel_noncoding | |||
|HGNC=659 | |||
|TSSclassifier=strong | |||
|UniProt= | |||
|association_with_transcript=0bp_to_BC030291_5end | |||
|description=CAGE_peak_9_at_ARF6_5end | |||
|id=chr14:50361127..50361150,+ | |||
|ontology_enrichment_celltype=CL:0002087!3.03e-23!119;CL:0002031!2.97e-22!124;CL:0000738!3.94e-21!140;CL:0002032!3.45e-19!165;CL:0000837!3.45e-19!165;CL:0000037!9.14e-19!172;CL:0000566!9.14e-19!172;CL:0000988!1.12e-18!182;CL:0002057!2.77e-18!42;CL:0002009!3.97e-17!65;CL:0000860!1.94e-16!45;CL:0002194!3.67e-16!63;CL:0000576!3.67e-16!63;CL:0000040!3.67e-16!63;CL:0000559!3.67e-16!63;CL:0000557!7.48e-15!71;CL:0000839!2.00e-14!70;CL:0000766!4.05e-13!76;CL:0000763!1.70e-11!112;CL:0000049!1.70e-11!112;CL:0000134!2.86e-10!358;CL:0000063!4.65e-10!578;CL:0002320!7.91e-10!365;CL:0000219!1.60e-09!390;CL:0000542!6.31e-08!53;CL:0000051!6.31e-08!53;CL:0000548!8.27e-08!679;CL:0000004!8.27e-08!679;CL:0000255!8.27e-08!679;CL:0000003!1.27e-07!722;CL:0000012!1.55e-07!682;CL:0000838!1.65e-07!52 | |||
|ontology_enrichment_celltype_v019=CL:0000860;1.32e-27;33!CL:0002057;1.32e-27;33!CL:0000473;1.19e-22;39!CL:0000234;1.19e-22;39!CL:0000576;9.32e-19;48!CL:0000766;1.61e-12;69!CL:0002087;2.68e-08;104!CL:0000738;5.35e-07;136 | |||
|ontology_enrichment_celltype_v019_2=CL:0000473,2.96e-31,48;CL:0000234,2.96e-31,48;CL:0000860,6.07e-31,42;CL:0002057,6.07e-31,42;CL:0002009,1.19e-30,61;CL:0002194,1.37e-28,59;CL:0000576,1.37e-28,59;CL:0000040,1.37e-28,59;CL:0000559,1.37e-28,59;CL:0000557,1.09e-26,67;CL:0002087,2.99e-26,115;CL:0002031,1.61e-25,120;CL:0000839,3.40e-24,66;CL:0000738,1.49e-23,136;CL:0000766,2.33e-22,72;CL:0002032,3.58e-21,161;CL:0000837,3.58e-21,161;CL:0000037,1.88e-20,168;CL:0000988,3.46e-19,177;CL:0000763,8.78e-18,108;CL:0000049,8.78e-18,108;CL:0000134,7.36e-08,354;CL:0002320,2.55e-07,361 | |||
|ontology_enrichment_development_v019=CL:0002057;1.51e-22;42 | |||
|ontology_enrichment_disease=DOID:162!3.93e-08!235;DOID:14566!2.10e-07!239 | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002371!2.80e-15!80;UBERON:0001474!1.67e-14!86;UBERON:0004765!1.35e-12!101;UBERON:0001434!1.35e-12!101;UBERON:0002390!7.94e-12!102;UBERON:0003061!7.94e-12!102;UBERON:0002384!1.40e-10!375;UBERON:0002193!1.86e-10!112;UBERON:0002405!1.52e-08!115 | |||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002371,4.11e-26,76;UBERON:0001474,1.37e-24,82;UBERON:0004765,4.02e-21,90;UBERON:0002405,6.92e-21,93;UBERON:0001434,1.61e-19,100;UBERON:0002390,2.04e-19,98;UBERON:0003061,2.04e-19,98;UBERON:0002193,3.71e-17,108;UBERON:0002204,1.73e-08,167;UBERON:0002384,2.80e-08,371 | |||
|phase1_expression=0.908391896352783,0.214100523890983,0.140954404095971,0,0,0.872338524100369,0,0,0,0,0.697801167972428,0.655324116390517,0.263766978228454,0.123766352960047,0.994192127183747,0,0.602694528023977,0,0,0.123121058076788,0.204000691244253,0,0.286235987131057,0.410623275218653,0.87879847716362,0.458480434487708,0.492603536699674,0.393553906568396,0.786728553697808,1.15148819429164,0.77408061658038,0,0,0,0.852139206383318,0.995184627411951,0.293600439334847,0,0.601633342410425,2.17010870715852,1.11957737119962,0.647787332037959,0.257575567634187,3.78035420826868,3.02300754951048,2.42584061187816,2.78914844286822,1.6446715520873,1.85823822537062,2.8769239232215,2.0492856522328,1.18241114944293,3.10271112662957,1.29096936716765,0,3.20011977222428,4.36649840092553,1.79778787556068,4.59125838556354,0.641858054152187,4.47535988059329,0.989553900560148,2.79249120670285,2.55734850319616,3.48251086354301,0.56738522469114,1.24564449799115,3.76872997885115,6.25779502104242,1.3031330682307,2.42159801053347,1.10483290796269,2.84816148696796,1.05627643155971,0.637812899895131,0.628975936525128,1.46027220490444,1.05123824989054,0.803627933485401,1.42506371870624,1.39241674039363,1.27864907635244,3.51992488922645,0,0.889509253863555,0.853460445133014,0,0,0,1.90810750907073,2.27685187643779,1.17447437874188,1.91136614062614,0,0,0.526768169550154,0.590129310341499,0.786021525498329,2.2616164889946,0.668745981562712,0.32592226663359,0.473447805734733,1.94826728407911,1.11410456885174,1.76763544484902,0.443067789167242,1.08321545506006,4.22701355094728,2.73124629875744,4.43982342429925,1.65810010671509,0.869409257205157,0.444859689486181,0.535081656179426,1.04535523804977,1.58633079776593,0.383220493601921,0,0,0.637130828648193,0,0.950452044448374,0.451725357233318,0.383959833463255,0,0.947109008176067,0,0.604820229674197,1.60464117470104,2.02754165435919,0,0,0.12786256184353,0.361439152384566,0.50133791063589,0.724232594804119,0,0.486634870302636,0.189069634328136,0.443458794925128,0.966182642624386,0.196468613246569,0.364295288292542,0,0.324547393654683,0,1.06366368415092,1.19245312152671,2.28797964312051,0,0,0,0,0,0.419499436209906,0.275118041940067,0.417989933073621,0.258416759169329,1.06729878806013,0,0,0,0.732186172644509,0.367663080345869,0,0.803697554556718,0.22452937262617,0.225222960966644,0,0,0.549605231791222,0,0,0.436094052142534,1.98788780678127,0.379891534993739,0.132409180813219,0,1.77334191099179,0,0,0.24666754841716,0,0,0.817309515567294,0,0,0.468642863667593,0.624320153660641,0,0.149448680551801,0.587172493218824,1.13311061057692,0.280901613404497,1.22492502752936,0.245668634623536,0.413303124703062,0,0.741800787835671,0,0,0,0.500474079487857,0,0,1.22595118319608,0.751190294532984,0.567160915800105,0,0.640672166455702,0.423863802319124,0,0.412210116953756,0,0.744467425326359,0.675105328965065,0,0,0.0920498986422993,0.323292113637624,0,0.201504196455281,0.169560592310488,0.193260853163297,0.545492241181669,0,0.121973706129595,0,0.348581828608555,0.414644220061482,0.756962552626885,0.36497735907583,0,0.643240938192885,0,0,0,0.709840800239063,0.168584690078102,0.723033089650446,0.661763836394364,0.217879444092406,0.949082476444386,0.134831308160164,0.392442930250692,0.38474715694639,0,0,0.8231480226628,0,0,0,0,0,0.491953754172454,0.343135620597051,0.109750285408626,0,0.603173834469785,0.555530670951178,0.325808305310325,0,0,0.115930404975077,0.117408694235822,0.288732895522148,0.462985512576611,0,0,0.858486162094873,1.96973604869918,0.234004265139238,0.445893486866185,0,0.16798212819886,0.141775097242386,0.53735113621709,0,0,0,0.352193736052904,0,0.288239906833923,0.6312121671319,0.126995788584338,0,0,0,0.308482478109971,0.901029173531752,0,0.112131084345361,0,0.36669142910475,0.775630294546667,0,0.845302752556,0.26593811658487,1.04007436911366,0.257207374262142,1.41849132023278,0,0.142977993658148,0.542621605391443,0.823240336780769,0.325736184293735,0,0.791951872933429,0,0,0.799783929456456,2.43247561282381,1.00451418286425,0,0.239624855491583,1.14861935834114,1.42636905040718,0.723906533337896,0,0.716243852959582,1.45710687191585,0.394061520403854,1.07813787429759,1.79680250791648,0,0,0.773288812777695,0,0,0.749007023947182,0,0,0,0,0.813795071099207,1.03985430765404,1.60586089917446,0.315404830067869,0.585707074963566,0.601892199455438,0,0,0,0,0.521301686808497,0.195801157462741,0,0.206768026122887,0.431428401637234,0.74709290462411,0.909382714338778,1.66435439510497,0,0.248107807818777,0.61384789315225,0,0.768834895534206,0,1.12597744800525,0,0.462629081407967,0.177561725313127,0.0821271560138091,0.519254429183621,0.697262270759755,0.120859449591622,0.200506470303285,0.736647911487171,0.114814448164607,0.182091168006717,0.393373244878272,0,0.462092022626489,0,0,0.422206515571503,0,0.170093705276516,0.431831832204279,0,0.270946437543853,0.501689773854853,1.01950509218015,0,0.671624264166535,0.219259876645935,0.522870902049801,0.512900250232778,0,0,0.103041011647722,0.183138929636687,0.082509499920588,0,0.650060246036521,0,0.096670718292122,0.770243085573222,0.614014698904518,0.964856007391714,0.322260734604821,0.145016693914229,0.767039646744908,0.267096106940212,0.330569830721956,0.192190067365106,0.127612712494584,0.50578890427775,0,0.62962469366128,0.6970372701606,0,0,0.869932992075073,0,0,0,0.316379424718726,0.190630193923825,0.255897791311334,0,0,0,0.359744915166629,0,0.824686816419805,0.606547444719948,0,0,0,0.243713489631284,0,0.136499911407986,0.565621727814851,1.13008116620243,0,0,0,0,1.31178950409327,0,0,0.563391205064483,0.143411352204052,0.196498082026242,0,0.354761064070598,1.05553817648832,0.329294892959902,0,0.699869440489966,1.05844323998063,0,1.08890984861323,0,0,0,0.443430153536676,0,0,0,0,0.238231775457789,0.411362273086194,0,0,0,0.213648142254946,0,2.20536194382929,2.04383492638291,0.28853842595289,0.569134746787313,1.11598390910176,0.199579371432817,0.383010740264733,0.635020748171649,0.649243880549111,0.842391534340376,2.28234679033192,0.313359791546046,0,0.338583555603207,0.642352300414798,1.00899853595524,0,0,0,0.223676107892416,0,0.19538809540204,0,1.23087398947712,0.270455678475983,0,0,0.935702702041099,0,0.121360521749513,0.780103689942349,0.852408440419239,1.19372242368845,0,0.614321404198464,0,0.140669416410513,0.222617410045812,3.62568523298871,1.05562704063997,0.19924798825107,0.276283915531148,0,1.1249555075237,0.738508832766417,1.86623752597084,0.359473404589307,1.07412704805365,2.04628948090749,0.0986434056369336,4.7896618469388,1.11136990144637,0,0.0927680981618513,0,0.520855522170466,0,0,1.4793148277115,2.2882828526349,0.236387681767936,0,1.16641845353302,0.173624994933292,0,0,0,0,0,0.219385397153973,0.21787692703798,1.67308493134324,0.153900517007594,0.455768223388005,0.23056390438806,0.0897576444097721,1.84700532267414,0.957003479195758,0.732780747214898,0,1.02193298195737,1.09886179476517,1.16348177330109,0,0,0,0.37950746544837,0.317873157960757,1.05499032264014,0.816164040795739,0.141353071433941,0,0.995261931078505,0,1.83309043480088,0.889563386041866,0.370691816839509,0.626531697032732,0,0,0,0.364909578431332,0,2.18502341580683,0,0,0,0,0.150323419414493,0.72581733978073,0.664653872707185,0.992975867626496,0,1.19472429772959,0.853828638089378,3.18951747930219,0.347119476670262,1.56787835863004,0.522355239482415,0,1.54787429224455,0.0967563312890851,0.365446585430928,0,0.193978032976839,0,0.225980740780532,1.78154502040776,0.993573058514948,0,0.977756913674015,0.240476460754601,0,0.19980960958213,0.72045208577053,0.114536596165916,0.343189995723929,0.576219191952599,0.49701014226173,0.471388069233591,0.271808412147228,0.627617077873999,0.509991088181609,0,0,0.273810757783986,0,0,1.8402114799552,0,0,0,0.798716001995964,0,0,0,2.52209918479682,0,0.236349546921671,0.0824158583811665,0.337017719270924,0.393709926058995,0.592713324460491,0.795229689809303,0,0,0.825236619583403,2.07720169014593,1.1248694577575,3.0952078182318,0,2.34804281319486,0,0.0524545881349981,0.950403028674658,0.179287339332845,0.959575986597226,0,0,2.5426853765475,0,0,0,0,0.82092520749339,0.511164065356265,0.679872549120754,0.146552233678082,0,0.129282956361551,0.13223260174269,0.513260513652988,0,0.213574825135389,0,0.828478110694391,0.992332043623902,0.988058159489721,0.974340787047167,1.27668251554036,0,0.2506898940227,0,0.327872630709804,0,0,0,0,1.14681839138014,0,0,0.276697269872462,0.624902039810533,0.909894705249887,0.570930667089935,1.88212655758537,0,0.28984205722165,0.597019211547496,0.233713309847224,0,0.189403005275089,0.50313580350515,0.889811221596536,0.228840068396924,0.302461847526478,0.310874401165561,0.147855149989634,0.159296767163702,0.449803112163605,0.155262956876259,1.24411862352257,0.265841714557995,1.5652351854352,0.300515217994437,0,0.406870733204662,0.363697318405119,0.107410557042488,0.464033759878494,1.19428766609585,0.400027764663154,1.03018711554838,0.336749488765919,0,1.15571898244382,1.07220795687463,0.521988583930423,0.453411851024545,0,1.46842022703881,0.179088841081487,0,0.219284049578707,0,0.192914038270915,0.506827321959218,0,0,0,0,0.584580926518165,0.132864840313363,0.981392365535065,0,2.70350199629091,0.633936370075881,0.79994958341972,1.06691729694141,3.96094453219876,1.13503190713367,2.02516545277025,0.559518030877778,0.622077260032973,0.383683113910955,0.323474434190045,0,0.218419276384028,1.69732529954025,0.212574920101683,0.247871528518004,0,0.636008701306837,0.315446980005013,0,2.1160556621441,0.3062454773532,0.0642292250964595,0,0,0.41023272848151,0.504143392443436,0,0,0,0.196295437002051,0.235939446695481,0.733714394086716,1.27078232765372,2.288292572803,0.690359926060101,0.198916222116275,0,1.61364054962816,0,0.261906694481422,0.49131575253029,0.295712172434091,0.0675375846183947,0,0,0.0634158101939068,0,0,0,0,1.14986184875636,0,0,0,0.227662191351298,0.0887023701626388,0.345701962667338,1.54339208493677,0.0679697329768317,0,2.12748913591143,1.11231401892069,0.078493092850514,0,0.560544326627578,0.913158720509496,0,1.43325506366115,0,0.632054446930906,4.30093273862063,0.173858272302579,0.801711364730253,0,0,0,0,0.354996002191696,0.170426809518315,0,0.4582137370881,0.62041277132864,0,0.447421727191169,0.392600934460972,0.243835849964539,0,0,1.1598144313382,0.485710993059139,1.40363678077263,0,0.237840181555137,0.11294608203896,0.329821550236287,0,0.231522474323834,0.218559560503957,0,0,0.235676547101626,0.196308467114945,0,0,0.679708458751268,0.375935671919414,0,0.399764623699716,1.2498775702396,1.05868461514708,0.802413666891683,0,0,0.143339583151451,0.946629373159108,0.0679914901909147,0.872701380680755,0,0,0.924351257262837,0.432626562123789,1.38783067318587,0.327796715891087,0.253397002022874,0.509944148709909,0,0.0918948995348449,0,0,0,0,0.103432995861895,0.213233981900981,0,0,0.0620747142958579,1.79410980128981,0.0636471582781649,0.404234377916439,0.217716747896961,0.342233301085281,0.202056159043763,0.0717222053926763,0.332660356546013,0.325613074443898,1.06727345877715,0,0.538951212639521,0,0,0.406896178315738,0,0.201273793591026,0.961705476909699 | |||
|short_description=p9@ARF6 | |||
}} |
Revision as of 19:59, 11 January 2014
Short description: | p9@ARF6 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_9_at_ARF6_5end |
Coexpression cluster: | NA |
Association with transcript: | 0bp_to_BC030291_5end |
EntrezGene: | ARF6 |
HGNC: | 659 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
defensive cell | 2.96e-31 | 48 |
phagocyte | 2.96e-31 | 48 |
classical monocyte | 6.07e-31 | 42 |
CD14-positive, CD16-negative classical monocyte | 6.07e-31 | 42 |
macrophage dendritic cell progenitor | 1.19e-30 | 61 |
monopoietic cell | 1.37e-28 | 59 |
monocyte | 1.37e-28 | 59 |
monoblast | 1.37e-28 | 59 |
promonocyte | 1.37e-28 | 59 |
granulocyte monocyte progenitor cell | 1.09e-26 | 67 |
nongranular leukocyte | 2.99e-26 | 115 |
hematopoietic lineage restricted progenitor cell | 1.61e-25 | 120 |
myeloid lineage restricted progenitor cell | 3.40e-24 | 66 |
leukocyte | 1.49e-23 | 136 |
myeloid leukocyte | 2.33e-22 | 72 |
hematopoietic oligopotent progenitor cell | 3.58e-21 | 161 |
hematopoietic multipotent progenitor cell | 3.58e-21 | 161 |
hematopoietic stem cell | 1.88e-20 | 168 |
hematopoietic cell | 3.46e-19 | 177 |
myeloid cell | 8.78e-18 | 108 |
common myeloid progenitor | 8.78e-18 | 108 |
mesenchymal cell | 7.36e-08 | 354 |
connective tissue cell | 2.55e-07 | 361 |
Ontology term | p-value | n |
---|---|---|
bone marrow | 4.11e-26 | 76 |
bone element | 1.37e-24 | 82 |
skeletal element | 4.02e-21 | 90 |
immune system | 6.92e-21 | 93 |
skeletal system | 1.61e-19 | 100 |
hematopoietic system | 2.04e-19 | 98 |
blood island | 2.04e-19 | 98 |
hemolymphoid system | 3.71e-17 | 108 |
musculoskeletal system | 1.73e-08 | 167 |
connective tissue | 2.80e-08 | 371 |