FFCP PHASE1:Hg19::chr14:50359773..50359850,+: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
Line 1: | Line 1: | ||
{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=382 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=659 | |||
|TSSclassifier=strong | |||
|UniProt=P62330 | |||
|association_with_transcript=0bp_to_ENST00000298316_5end | |||
|description=CAGE_peak_1_at_ARF6_5end | |||
|id=chr14:50359773..50359850,+ | |||
|ontology_enrichment_celltype=CL:0000738!1.33e-40!140;CL:0002031!5.05e-34!124;CL:0002087!5.93e-32!119;CL:0000037!1.02e-27!172;CL:0000566!1.02e-27!172;CL:0000766!5.43e-27!76;CL:0000988!7.82e-27!182;CL:0002032!1.40e-25!165;CL:0000837!1.40e-25!165;CL:0000557!5.66e-24!71;CL:0002057!7.75e-24!42;CL:0000839!5.09e-23!70;CL:0000860!3.15e-22!45;CL:0002009!3.31e-22!65;CL:0002320!1.88e-21!365;CL:0002194!2.33e-21!63;CL:0000576!2.33e-21!63;CL:0000040!2.33e-21!63;CL:0000559!2.33e-21!63;CL:0000134!8.40e-21!358;CL:0000063!5.44e-19!578;CL:0002371!8.58e-19!591;CL:0000219!4.23e-17!390;CL:0000003!2.76e-16!722;CL:0000012!1.61e-15!682;CL:0000763!1.98e-15!112;CL:0000049!1.98e-15!112;CL:0000144!3.37e-15!625;CL:0000034!3.70e-15!444;CL:0000723!3.73e-15!436;CL:0000048!4.90e-15!430;CL:0000548!6.34e-15!679;CL:0000004!6.34e-15!679;CL:0000255!6.34e-15!679;CL:0000838!2.46e-10!52;CL:0000542!7.46e-10!53;CL:0000051!7.46e-10!53 | |||
|ontology_enrichment_celltype_v019=CL:0000860;5.50e-18;33!CL:0002057;5.50e-18;33!CL:0000473;1.39e-15;39!CL:0000234;1.39e-15;39!CL:0000576;3.93e-15;48!CL:0000766;9.70e-13;69!CL:0002087;1.90e-10;104!CL:0000738;1.89e-09;136!CL:0000219;7.63e-07;193 | |||
|ontology_enrichment_celltype_v019_2=CL:0000738,1.24e-41,136;CL:0002031,5.09e-35,120;CL:0002087,6.19e-33,115;CL:0000766,2.34e-28,72;CL:0000037,2.87e-28,168;CL:0000988,2.25e-27,177;CL:0002032,4.08e-26,161;CL:0000837,4.08e-26,161;CL:0000557,2.82e-25,67;CL:0000473,2.60e-24,48;CL:0000234,2.60e-24,48;CL:0000839,2.74e-24,66;CL:0000860,7.75e-24,42;CL:0002057,7.75e-24,42;CL:0002009,1.56e-23,61;CL:0002194,1.12e-22,59;CL:0000576,1.12e-22,59;CL:0000040,1.12e-22,59;CL:0000559,1.12e-22,59;CL:0002320,1.43e-21,361;CL:0000134,6.35e-21,354;CL:0000219,3.53e-17,386;CL:0000763,6.21e-16,108;CL:0000049,6.21e-16,108;CL:0000034,2.43e-15,441;CL:0000723,2.43e-15,433;CL:0000048,3.18e-15,427;CL:0000838,2.46e-10,52;CL:0000542,7.46e-10,53;CL:0000051,7.46e-10,53 | |||
|ontology_enrichment_development_v019=CL:0002057;1.69e-17;42 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002390!1.16e-25!102;UBERON:0003061!1.16e-25!102;UBERON:0002371!8.50e-25!80;UBERON:0002193!8.84e-23!112;UBERON:0001474!1.60e-22!86;UBERON:0002384!1.00e-20!375;UBERON:0004765!2.91e-20!101;UBERON:0001434!2.91e-20!101;UBERON:0002405!2.96e-17!115;UBERON:0003081!6.49e-15!216;UBERON:0002204!2.28e-11!167;UBERON:0000926!2.07e-07!448;UBERON:0004120!2.07e-07!448;UBERON:0006603!2.07e-07!448 | |||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002390,1.33e-26,98;UBERON:0003061,1.33e-26,98;UBERON:0002371,5.56e-26,76;UBERON:0002193,1.58e-23,108;UBERON:0001474,1.64e-23,82;UBERON:0002405,6.09e-22,93;UBERON:0004765,2.14e-21,90;UBERON:0002384,7.84e-21,371;UBERON:0001434,8.18e-21,100;UBERON:0003081,6.10e-13,203;UBERON:0002204,9.43e-12,167;UBERON:0000926,2.20e-08,315;UBERON:0004120,2.20e-08,315;UBERON:0006603,2.20e-08,315 | |||
|phase1_expression=27.4334352698541,41.9637026826327,25.7946559495627,46.03371724244,31.2872766099101,25.2978171989107,30.3959853801973,32.2177135447684,33.4317604095793,33.6655493007067,99.7855670200571,54.8287844046732,55.3910654279752,37.6249712998542,58.3259381281132,39.6671836406547,39.1751443215585,45.2792256040171,30.2518335250114,48.1403337080241,72.0122440092213,43.5702062854542,24.0438229190088,38.0510901702618,36.281822842898,72.2106684318139,70.5244063375034,60.8434339554741,199.435688362394,124.360724983497,213.491434052869,42.2933763260306,50.602594354746,37.3451550268456,36.8743874762236,23.0314156629623,52.5544786409377,140.160838358565,153.817591209599,149.737500793938,57.9941078281404,48.5840499028469,66.1969208819859,140.30930042228,134.145960009527,125.901127756477,135.041270442203,124.583870070613,115.830182714769,130.612346114256,106.562853916106,82.5322982311162,102.044721498039,81.3310701315621,86.6729514203787,151.911568010882,119.805799875394,80.6757309157854,144.777681091437,78.6276116336429,96.5399059956552,121.055427168525,126.260495274493,108.687311385837,158.744453529835,111.774889264155,100.897204337283,142.457993200573,128.28479793137,95.5630916702513,143.479682124108,88.018355001028,73.1028114988443,73.9393502091796,72.4980662880798,69.1873530177641,62.1177330240118,68.1803093500439,59.3077414912226,78.9485300163258,65.2446701213016,66.4897519703268,63.3586480060762,78.6439600217469,80.0558328477199,116.497350760656,90.8898890571748,74.1430647541283,93.2073270626656,79.1864616264352,101.319908501482,93.3707131099793,89.8342086094288,35.686258716337,96.9679813958057,49.7795920224896,61.9635775858574,88.0344108558129,94.3710880407747,57.6793409097839,63.8807642601837,64.8623493856585,35.068811113424,56.0394598132423,57.7427578650681,54.7188719621544,49.2863032052328,77.3671571143078,70.8823444201336,75.4769982130873,52.5065033793112,50.7155400036342,40.0373720537563,31.5698177145861,38.6781438078414,57.9010741184563,46.3696797258325,61.5093127413908,47.5677020996665,48.1033775629386,48.8312590392314,73.1848074225248,69.1139796566977,66.2970645779887,34.9806034346568,64.1666353039286,68.1536237444469,92.7391018833769,113.394643012207,95.2944577548817,73.1420598941885,52.3146670568836,57.1545651440581,52.7701162481467,36.5976674764199,57.6489145464078,13.5198610998687,59.8560890472242,28.9276540522048,34.3680566066974,40.0526622760655,35.4298399221313,69.9446953521681,59.6962952882931,47.7084668672384,37.6120232566417,56.24121729948,96.8271934679688,121.262921085387,138.182190494598,29.6155986976391,38.7105567797756,29.1598021350379,26.0041653285044,49.5009334727689,47.0451851717515,35.320149344721,28.4258435086262,30.2401323283704,25.4387665701149,35.4489799056049,22.8081631715554,49.5445976822784,33.8250033918199,51.0389427165509,31.6121038125642,45.1304038978601,43.693254427529,52.1276567384003,27.5287041274757,44.518023775089,79.068250461638,96.9450660370813,53.6395684135317,35.7819805220629,42.9277434542925,19.993786302796,22.9469296599051,58.5202830627289,45.4148856115269,32.0246987189115,56.4868685875296,37.0341132125722,45.8016285036939,40.2116281659108,37.536642055943,42.0608424870399,81.0752154144936,58.3739343672699,26.8121756125891,62.9178945123083,64.7064087527145,61.0261000267856,55.0567162272814,41.8516051072531,53.9242652998661,46.8065788726217,48.7081171485642,60.5803976732464,51.8791976304675,49.5846517853205,42.4207007164247,52.6748968660969,56.2440154432891,58.3840235771514,52.1029252858333,54.9871295598144,48.8892709419691,28.3435624388402,41.2165760419835,34.332967987849,32.4098383771154,44.4156401017672,21.8994459038785,35.1760858466705,31.5611741291168,42.3850972451214,21.4568708107497,27.8911192886167,45.584188022905,28.7557769938458,42.013624960926,37.4728909006178,33.0476058909238,40.0936797268527,31.8353100881794,39.7634281982481,34.7227993002291,32.5343040034652,35.8667250353182,41.8852612453543,34.307871753128,29.725411142665,59.8214072519383,40.0591271922194,39.9356418107502,29.597058748453,41.8806072141047,44.3377734905407,51.3353493651817,51.1764033478308,53.3804638026395,51.9622655853302,39.5055732909282,37.4782998389411,41.5526929502102,33.9551509127338,75.7305578538607,41.15740113314,61.7436587819276,39.2940607947676,43.2443975338155,46.0816127211495,33.1097324560988,33.8218205993562,57.6467842603046,43.5708633072244,53.9528415636574,66.7512376813229,61.015785359471,71.3520188629611,82.1548480370867,47.6293428683402,48.8067004945073,51.4250080752899,28.7289231044537,27.7791307545966,36.7190513812775,73.4890090102126,66.9619206434001,66.9710256557721,38.6107037479742,60.6415142138011,31.8695035555042,33.9323898961696,29.6309953236588,86.6926499763571,89.2246191237863,82.4272760205204,9.85326475791887,78.4511547057844,164.411195623832,185.338260094212,156.414375015285,61.9104469348648,68.3759281749317,37.509583107215,47.9002848863575,48.2260940778587,43.850086445212,55.4503279303322,60.3265233778041,41.4162065391616,52.5102126478002,19.9078442266978,42.9187735022259,92.98330278116,35.6357076223726,39.5228260263191,62.2441845714384,73.7615486521047,66.8719669330409,31.1692026174762,37.4408907720096,26.3436907769846,63.5185559372783,42.291641900363,69.6917648181418,23.2108320335881,13.0730018790044,37.2899257109073,63.244365933419,70.3159928004977,48.4918060810973,45.0494728324175,28.7154839585285,62.7602382179161,39.6700780269167,45.4102672836347,42.4374482878553,53.0162731089384,93.5896110959154,124.201483119082,136.813676674212,26.1717462949137,33.8363620029816,34.7979965749963,34.8433831895445,29.9831213276987,86.135807753926,92.7400523532477,75.0092079319224,35.8259155819888,38.0129596005355,75.6829416122262,35.3550464602372,37.1132296698096,31.6981854218209,38.8909497775808,27.3860950752224,72.7704012979152,37.2503056653018,39.8535359121262,49.042198832093,40.6615315710628,54.6285229321046,50.098939876385,58.5153513927771,92.5413921511866,108.115016054889,75.7818928615649,58.252403828674,63.5019615992329,24.0664573584214,27.4696932185632,37.6084526540319,28.0624736869985,27.1204842005353,42.626289103056,48.977961926847,50.4265698734684,44.745554778908,35.1504227739103,35.8285556136699,53.1081429562014,29.6105651499474,46.1164881697555,60.3130477530121,31.1147154526084,57.3587179221159,38.1572047531924,51.4367558714449,57.7615028283111,83.9254253019235,100.83606501075,45.1760971661508,55.7293581947393,42.5234263191289,70.6045045653996,44.7259032801839,57.1696983217529,71.741637661244,78.2470158248268,104.715577125019,84.176907775539,62.9275845973832,56.4700574213785,41.8013703939714,31.8174206328715,23.1018660211655,36.4765181232937,41.5725370275279,33.251328467997,28.1390113618124,38.3535545161548,41.7778217594815,36.44486079613,50.0658005622594,44.0555546463992,58.8562164508946,27.2847421965415,38.2844071933563,50.1984835480834,34.4553977952874,41.1559439248836,62.2695818262944,20.9284848491118,58.4691973345079,79.9534344791332,29.2775482552495,34.85186350803,35.1158281400741,33.0029738796554,35.667252675078,28.9105781802115,25.9056045003004,39.8209455214844,40.8129457887156,42.8917936328606,57.0652074624275,50.4968005880026,29.9111053050381,43.9571238511569,32.3770423649966,36.2388879251592,41.1165284186446,28.3055474202642,23.7765481759512,41.7045871676591,55.5902462562133,39.9690122995306,33.8080469621617,36.4454763459322,34.6443308286596,45.2032466480971,22.6059790853911,32.5085097868198,27.1839548857333,38.1991852616014,49.1921064034975,18.4648443036061,37.4886432700698,34.6485591114657,62.6707609131705,64.2548728225812,21.7569341403563,25.542796613083,53.410231730309,47.7477594791858,49.331512589543,90.2831578232056,27.808190577673,36.8666251544683,37.0229348528497,36.9043699044974,58.9792360559585,58.9650164836689,70.0619642587948,52.3769352471868,74.0873509478967,45.8782324285425,63.230837776332,42.881719582402,44.427125493309,64.198857808079,59.9434895334307,62.6568889272474,29.5902677023101,35.6117546447443,38.2262736930409,30.2859175454922,31.7392268548179,38.3454535647952,23.1168095456792,36.1238662293398,46.3442995720327,36.8312033939556,21.1004261178461,24.9909488520978,26.4752227678503,33.529497695427,32.5824820217087,40.12215133898,33.0811434713621,29.2609575427019,44.2880087197939,28.8544489594842,41.1702624173334,39.3669949890652,46.7177596793344,26.7681690700795,34.2439593891148,23.3866058000653,32.454681417118,29.3103331838082,38.0664913737194,71.8619675167564,40.8757820168584,25.6070700891473,36.3305432744579,40.0631966997042,105.763806738797,62.3625829748541,135.150708923662,22.8653958986249,18.1463547169561,33.7265376219405,68.0640000556517,27.2351776485112,48.2180131567589,41.7188712452033,16.8794941062365,27.5102755930796,39.6333073584644,41.6793047466822,39.2724694513818,50.842013607873,42.4605067288304,44.1922457253463,100.582898785715,33.3410970433911,16.4786566836187,24.3980098165669,19.9613798001194,46.876996995342,47.6656999979267,35.5249791963049,45.6311727624854,55.4272957638231,30.0212355845279,16.5476819155903,22.1619506171273,32.6414990474589,16.8290863304629,19.0542373028145,22.8872604475625,24.4380164448006,28.3725714195406,27.8619454385545,28.8686928325324,70.8272620935305,43.0921447621264,23.1302373369412,67.3246600813136,34.1976625201232,44.3281277441793,82.6213003705671,65.217486502126,81.5543207308511,43.9431182241667,31.0820907662149,30.9153728334291,18.9500354918432,20.1944410347272,17.9569098064152,13.8520224888655,36.078603428546,59.5014541969036,34.7685881378985,25.8676120724112,13.1997070242676,50.7583584850037,48.5632029123332,41.5500498554865,36.4720988277165,31.5088044313582,22.9728288912002,19.815933096319,29.6953729500552,21.5523290067312,40.1400536274465,48.7204901140903,57.7817303291141,31.9613366308006,35.0873076541125,24.1797481688087,46.6948823454526,31.2672712382144,18.041745303121,62.4774640344754,45.3458979549433,58.7054557421511,77.6570793524232,30.4532214251878,57.6886639734657,23.7776841519129,64.6749822934893,51.6261095021787,37.3915070037945,53.831628163616,36.6706495585633,44.8037513738318,37.3625329592102,74.5845536795945,31.3309249754826,35.4789763025436,41.5237031679655,32.3904817075873,18.9299279908077,38.3280710160214,26.131775402,39.7022570215196,21.3796282252879,58.500709364567,22.1055630600217,42.0407744761813,41.4877818205871,40.6305791298964,49.495747269527,21.472864559631,17.9916895657213,19.8896524390827,34.9630213780838,20.4142898161328,26.9703596417226,111.139531618266,46.8444331147753,67.2991626955045,24.8561337132306,23.8326840972151,30.1506670322262,40.9341951022932,21.032076358692,29.0122894674434,21.364344250779,42.1550863744612,54.7530962779033,36.7129629551662,35.5212349622827,33.4321577516757,18.1106565987138,46.9936992965104,15.9045937961861,20.1581041045132,29.4178261690985,37.8233450642393,34.4815480564224,127.560196509701,59.5827505009621,17.7388705441432,52.6632459530848,34.6745112116472,36.5083933419587,47.8369524432911,32.4510084192449,43.5647497915141,23.5849457703211,20.5248510813284,49.3280963050215,23.3489828754096,19.8770942976292,34.6182601715974,21.5514344812477,42.1134631444109,26.0693673331695,38.4127990253226,35.7587450174521,41.0771355627886,19.1338775415095,23.2729379067134,32.8486728737912,39.4696412497336,50.1900839068165,24.5238715955479,40.181188368678,50.608934224819,52.1694708210573,28.6212606195105,59.3657369726269,31.5530325954295,38.6062436794958,33.6980134439808,29.1806641331726,17.2759505875258,22.1517044991746,13.6669416690199,16.9007756453775,28.6704597845036,25.0699656473286,20.9885841941876,21.3056897801795,42.8682799310026,37.0023846801621,29.6883946886766,45.6415690214453,26.6950896309923,20.1440229769047,53.283964630614,46.0415220399032,38.2816044436803,59.8513496669282,60.1247285188654,33.8128264206684,45.9968537477816,55.652979944872,64.3510010412711,50.4186061464652,54.4794943699862,31.0364147392887,45.6473093216203,43.9588580311307,53.9658680552729,29.7394685232688,42.67316095521,23.2291179422965,45.5695221189221,52.008716531932,48.7643928972898,43.1551396686999,37.8191094263685,49.2034150535679,34.3395705182793,41.420187118208,26.4988286280167,35.2494289645365,29.1640564269899,29.2313607001037,21.0836510726413,17.3641855742875,39.1578727210348,28.4751257319565,24.0865128785558,23.9019614040791,31.2739788324209,25.0788249752189,16.5563591840011,17.6806647825683,16.5806564030975,22.1817768009489,20.1857316781527,63.71932099048,70.5512302063958,53.9765801044286,55.0384546061973,47.1883984807141,69.5216885849883,73.7953490704691,22.5119549654637,64.4084023931451,78.8847175457902,50.6291363192562,65.4636096127,92.06743448488,22.5094093494427,30.4065968138643,23.1180934528168,30.2510697791879,30.3821228617705,24.2335408915918,33.8344636427076,39.1051442581271,51.1987004552004,28.5479516904537,11.2079904759966,37.0309740875218,36.4432118050308,17.5345784513335,15.5866233958143,21.2313032546011,18.2553564174272,14.8722300770814,17.150998611126,22.9295416797229,18.5600246336901,25.7147022472687,36.4526445144518,51.3600075860701,85.2579416189496,40.8078842149869,80.7721113490318,20.4883708779763,34.4463303839598,53.8552533438399,28.1345044043913,43.2146045894347,32.7543835020194,36.076885036959,19.7885122931896,17.9647962681185,13.2279549760758,18.3271691460391,14.7683198434919,52.0844878514323,27.2916148114112,16.0042832367255,47.1443357990107,22.499477106888,19.5044558886918,24.2786241694653,21.8555703697246,49.6733272910777,46.2088290098675,28.9814735949237,19.6432528303044,15.9170112022095,78.244322665187,49.2755110381866,44.5055836462414,16.6542525310962,77.6353892379196,35.6131900998703,26.9909489023277,20.0655708912561,29.6627658333124,19.5936878548581,108.337008443093,26.2525991176895,40.8872796012429,40.8215843401183,40.6309975483601,49.0794359888005,50.3366009819725,43.9011722710397,37.1530444749928,24.5564489110739,35.7406714928718,32.8818768804179,36.3104796811425,50.111233445411,27.874666346729,27.6753689709752,18.1280074412611,28.5402603060367,31.3149896461314,37.8854574586129,34.1551616654674,24.868846895171,27.1137806972856,19.2008339466232,19.459471463941,40.6090049194352,70.7687029849853,39.9963995722242,22.1049129289916,31.6241335062538,38.6509537246667,18.2566874416899,16.0405056176626,22.4007535619202,57.9451461085456,54.8866081002345,43.3801586062174,38.5772861870226,27.14019866806,39.8771205038732,26.9610992075605,60.6179202244609,36.6983426723633,22.0742958053235,23.3501912045913,21.6212938807109,26.1810414204226,34.9157714740164,66.2151132336817,56.8476023216644,63.1634780700732,20.5651272481179,25.7866749834321,39.5299323155683,41.8154201942125,18.4380009633237,48.4286120548633,35.3497630402249,34.0246354999895,28.6721619267111,17.4125582286344,19.5488362178982,46.0585400906119,38.0903090341985,51.2190054999528,36.251633148781,49.3380195354699,34.3058183119309,33.5514533670644,49.4217017726102,42.7791626356601,67.6888132796605,50.4924325964442,27.6108095933191,37.6897133668812,39.7025726665102,32.8222879887798,59.5541089966671,30.5033225124491,38.5060549176029,35.3999675134692,34.6193522576467,37.6381994015219,52.8938012300334 | |||
|short_description=p1@ARF6 | |||
}} |
Revision as of 19:58, 11 January 2014
Short description: | p1@ARF6 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_ARF6_5end |
Coexpression cluster: | NA |
Association with transcript: | 0bp_to_ENST00000298316_5end |
EntrezGene: | ARF6 |
HGNC: | 659 |
UniProt: | P62330 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
hematopoietic system | 1.33e-26 | 98 |
blood island | 1.33e-26 | 98 |
bone marrow | 5.56e-26 | 76 |
hemolymphoid system | 1.58e-23 | 108 |
bone element | 1.64e-23 | 82 |
immune system | 6.09e-22 | 93 |
skeletal element | 2.14e-21 | 90 |
connective tissue | 7.84e-21 | 371 |
skeletal system | 8.18e-21 | 100 |
lateral plate mesoderm | 6.10e-13 | 203 |
musculoskeletal system | 9.43e-12 | 167 |
mesoderm | 2.20e-08 | 315 |
mesoderm-derived structure | 2.20e-08 | 315 |
presumptive mesoderm | 2.20e-08 | 315 |