FFCP PHASE1:Hg19::chr14:22976633..22976649,+: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene= | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=novel_coding | |||
|HGNC=12064 | |||
|TSSclassifier=strong | |||
|UniProt= | |||
|association_with_transcript=-1bp_to_ENST00000390503,uc001wfb.1_5end | |||
|coexpression_cluster_id=C36 | |||
|description=CAGE_peak_1_at_TRAJ34_5end | |||
|id=chr14:22976633..22976649,+ | |||
|ontology_enrichment_celltype=CL:0000838!1.67e-27!52;CL:0000542!6.71e-27!53;CL:0000051!6.71e-27!53;CL:0000791!5.11e-19!18;CL:0000789!5.11e-19!18;CL:0002420!5.11e-19!18;CL:0002419!5.11e-19!18;CL:0000790!5.11e-19!18;CL:0000084!2.22e-16!25;CL:0000827!2.22e-16!25;CL:0000898!8.26e-15!3;CL:0000945!3.31e-14!24;CL:0000826!3.31e-14!24;CL:0000624!1.08e-12!6;CL:0002087!1.35e-10!119;CL:0000815!1.93e-10!2;CL:0000792!1.93e-10!2;CL:0002677!1.93e-10!2;CL:0000625!4.69e-10!11;CL:0002031!7.21e-09!124;CL:0000738!2.35e-08!140;CL:0000080!4.02e-07!6;CL:0000988!5.36e-07!182 | |||
|ontology_enrichment_celltype_v019=CL:0000945;4.82e-26;24!CL:0000214;1.47e-09;3 | |||
|ontology_enrichment_celltype_v019_2=CL:0000945,4.02e-26,24;CL:0000826,4.02e-26,24;CL:0000838,3.09e-12,52;CL:0000542,5.20e-12,53;CL:0000051,5.20e-12,53;CL:0000214,1.41e-09,3 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease=DOID:0060058!1.07e-10!10 | |||
|ontology_enrichment_disease_v019=DOID:630;2.78e-26;1!DOID:0050177;2.78e-26;1!DOID:0050427;2.78e-26;1 | |||
|ontology_enrichment_disease_v019_2=DOID:630,2.78e-26,1;DOID:0050177,2.78e-26,1;DOID:0050427,2.78e-26,1 | |||
|ontology_enrichment_uberon=UBERON:0004177!4.66e-16!7;UBERON:0002370!2.77e-11!4;UBERON:0005058!2.77e-11!4;UBERON:0009113!2.77e-11!4;UBERON:0003295!2.77e-11!4;UBERON:0005562!2.77e-11!4;UBERON:0003351!1.17e-07!6;UBERON:0001042!1.69e-07!10;UBERON:0009145!1.69e-07!10;UBERON:0006562!8.08e-07!11;UBERON:0009722!8.21e-07!11;UBERON:0007690!8.21e-07!11 | |||
|ontology_enrichment_uberon_v019=UBERON:0002370;1.14e-13;2!UBERON:0005058;1.14e-13;2!UBERON:0009113;1.14e-13;2!UBERON:0006915;1.47e-09;3!UBERON:0007616;1.47e-09;3!UBERON:0002217;1.47e-09;3!UBERON:0002018;1.47e-09;3 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0006915,1.41e-09,3;UBERON:0007616,1.41e-09,3;UBERON:0002217,1.41e-09,3;UBERON:0002018,1.41e-09,3;UBERON:0002370,2.04e-07,4;UBERON:0005058,2.04e-07,4;UBERON:0009113,2.04e-07,4;UBERON:0003295,2.04e-07,4;UBERON:0005562,2.04e-07,4 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.60468152070698,3.11982239909794,1.96776953284198,0,0,0,0,0,0,0,0.142169232487422,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.393419540227666,0,0,0.501559486172034,0.977766799900771,0,0,0.222820913770347,0.589211814949674,0,0,0,0.260118695119756,0.328875809207352,0.276350017785848,0.289803085735052,0,0,1.04535523804977,0.113309342697566,0.766440987203842,0,0.759059076058509,0,0.651083453856419,0.950452044448374,0,0.255973222308837,0,0,0,0,0.267440195783507,0.144824403882799,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.206768026122887,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.540031437238115,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.445773537109913,0,0,0,0,0,0,0,0,0.211125408127993,0,0.276283915531148,0,0,1.23084805461069,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.370691816839509,0.208843899010911,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.169346664131569,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.243585196761792,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.921871900446234,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.647428837187895,0,0,0,0,0,0,0,0,0,0.0771741581079447,0,0,0,0,0,0,0,0,0.0939839179798536,0,0.199882311849858,0,0,0,0,0,0,1.26217249754548,0,0,0,0,0,0,0.126166424835079,0,0,0,0,0,0,0,0,0,0,0,0,1.0334225573761,0.744896571550295,0,0.0636471582781649,0,0,0,0.0673520530145875,0,0,0,0,0,0,0,0,0,0,0.805095174364105,2.56454793842586 | |||
|short_description=p1@TRAJ34 | |||
}} |
Revision as of 19:08, 11 January 2014
Short description: | p1@TRAJ34 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_TRAJ34_5end |
Coexpression cluster: | C36_B_b_splenic_plasma_xeroderma_adrenal_Burkitt |
Association with transcript: | -1bp_to_ENST00000390503, uc001wfb.1_5end |
EntrezGene: | NA |
HGNC: | 12064 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
lymphocyte of B lineage | 4.02e-26 | 24 |
pro-B cell | 4.02e-26 | 24 |
lymphoid lineage restricted progenitor cell | 3.09e-12 | 52 |
lymphocyte | 5.20e-12 | 53 |
common lymphoid progenitor | 5.20e-12 | 53 |
synovial cell | 1.41e-09 | 3 |
Ontology term | p-value | n |
---|---|---|
stratified squamous epithelium | 1.41e-09 | 3 |
layer of synovial tissue | 1.41e-09 | 3 |
synovial joint | 1.41e-09 | 3 |
synovial membrane of synovial joint | 1.41e-09 | 3 |
thymus | 2.04e-07 | 4 |
hemolymphoid system gland | 2.04e-07 | 4 |
thymic region | 2.04e-07 | 4 |
pharyngeal gland | 2.04e-07 | 4 |
thymus primordium | 2.04e-07 | 4 |
Ontology term | p-value | n |
---|---|---|
genetic disease | 2.78e-26 | 1 |
monogenic disease | 2.78e-26 | 1 |
xeroderma pigmentosum | 2.78e-26 | 1 |