FFCP PHASE1:Hg19::chr14:106320405..106320425,-: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=3507 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=novel_noncoding | |||
|HGNC=5541 | |||
|TSSclassifier=weak | |||
|UniProt= | |||
|association_with_transcript=75bp_to_J00258_5end | |||
|coexpression_cluster_id=C350 | |||
|description=CAGE_peak_8_at_IGHM_5end | |||
|id=chr14:106320405..106320425,- | |||
|ontology_enrichment_celltype=CL:0000945!3.18e-61!24;CL:0000826!3.18e-61!24;CL:0000236!1.05e-28!14;CL:0000542!3.31e-28!53;CL:0000051!3.31e-28!53;CL:0000838!1.03e-25!52;CL:0002087!3.40e-12!119;CL:0000738!9.86e-11!140;CL:0002031!4.03e-09!124;CL:0000037!1.16e-08!172;CL:0000566!1.16e-08!172;CL:0000988!6.75e-08!182;CL:0002032!1.99e-07!165;CL:0000837!1.99e-07!165 | |||
|ontology_enrichment_celltype_v019=CL:0000945;4.20e-68;24!CL:0000542;6.64e-21;53!CL:0000236;1.37e-14;13!CL:0002087;3.26e-07;104 | |||
|ontology_enrichment_celltype_v019_2=CL:0000945,4.24e-68,24;CL:0000826,4.24e-68,24;CL:0000542,1.51e-35,53;CL:0000051,1.51e-35,53;CL:0000838,1.08e-30,52;CL:0002087,2.38e-15,115;CL:0000236,1.55e-13,14;CL:0000738,9.94e-13,136;CL:0002031,2.61e-12,120;CL:0002032,1.73e-10,161;CL:0000837,1.73e-10,161;CL:0000037,5.58e-10,168;CL:0000988,2.20e-09,177 | |||
|ontology_enrichment_development_v019=CL:0000051;6.64e-21;53!UBERON:0006965;3.92e-07;2 | |||
|ontology_enrichment_disease=DOID:0060058!1.28e-10!10 | |||
|ontology_enrichment_disease_v019=DOID:12603;1.61e-13;1!DOID:4960;5.37e-13;1!DOID:0070004;5.37e-13;1!DOID:0060058;3.26e-11;10 | |||
|ontology_enrichment_disease_v019_2=DOID:12603,1.61e-13,1;DOID:4960,4.23e-13,1;DOID:0070004,4.23e-13,1;DOID:0060058,3.26e-11,10 | |||
|ontology_enrichment_uberon=UBERON:0002106!5.09e-13!3;UBERON:0004854!5.09e-13!3;UBERON:0009034!5.09e-13!3;UBERON:0002095!5.09e-13!3;UBERON:0004782!5.09e-13!3;UBERON:0003281!5.09e-13!3;UBERON:0009664!5.09e-13!3;UBERON:0002296!5.09e-13!3;UBERON:0005602!5.09e-13!3;UBERON:0001179!5.09e-13!3;UBERON:0006293!5.09e-13!3;UBERON:0007023!6.17e-11!115;UBERON:0000178!6.22e-07!15;UBERON:0000179!6.22e-07!15;UBERON:0000463!6.22e-07!15 | |||
|ontology_enrichment_uberon_v019=UBERON:0000029;2.05e-13;1 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000029,2.06e-13,1 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.37544130346312,1.31360943119913,1.41679406364623,0,0,0,0,0,0,1.00707360754392,1.9903692548239,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.75996244461323,0.546138611262131,0,0,0.400395987036012,0.574752439954483,0.661044872784862,0,1.1384259382189,1.76171156811282,1.14681968437569,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.238490624305342,0.571994910780128,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.213455115606889,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.569647187174163,1.90585420366231,1.23408681925858,0,0.540031437238115,0,0,0,0,9.47596193141165,0.144269212976445,0,0,0,0,0.211673582723883,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.276283915531148,0,0,2.33861130376032,0,0,0,0,0.0986434056369336,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.995261931078505,0.442287822516696,0,0,0,0,0,0,0,0,0,0,0,0,0,0.821425535170343,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.254019996197353,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.106787412567695,0,0,4.46549419630756,0,5.48066692714032,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.54993481694734,0,0,0,0,0,0,0,0,0,0,0,0,0,0.630893960010027,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.345701962667338,0,0,0,0,0,0,0,0,0,0,0,0.214429632529969,0,0,0,0,0,0,0,0.430227358820278,0,0,0.846774100381858,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0771741581079447,0,0,0,0,0,0,0,0,0.563903507879121,0.644578879735772,0.0999411559249289,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.151557396436479,0,0,0,0.213233981900981,0,0,0,0,0,0,0,0,0.202056159043763,0.143444410785353,0,0,0,0,0,0,0,0,0,1.20764276154616,0 | |||
|short_description=p8@IGHM | |||
}} |
Revision as of 22:20, 11 January 2014
Short description: | p8@IGHM |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | No |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_8_at_IGHM_5end |
Coexpression cluster: | C350_b_lymph_acute_CD19_lymphoma_spleen_B |
Association with transcript: | 75bp_to_J00258_5end |
EntrezGene: | IGHM |
HGNC: | 5541 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
lymphocyte of B lineage | 4.24e-68 | 24 |
pro-B cell | 4.24e-68 | 24 |
lymphocyte | 1.51e-35 | 53 |
common lymphoid progenitor | 1.51e-35 | 53 |
lymphoid lineage restricted progenitor cell | 1.08e-30 | 52 |
nongranular leukocyte | 2.38e-15 | 115 |
B cell | 1.55e-13 | 14 |
leukocyte | 9.94e-13 | 136 |
hematopoietic lineage restricted progenitor cell | 2.61e-12 | 120 |
hematopoietic oligopotent progenitor cell | 1.73e-10 | 161 |
hematopoietic multipotent progenitor cell | 1.73e-10 | 161 |
hematopoietic stem cell | 5.58e-10 | 168 |
hematopoietic cell | 2.20e-09 | 177 |
Ontology term | p-value | n |
---|---|---|
lymph node | 2.06e-13 | 1 |
Ontology term | p-value | n |
---|---|---|
acute leukemia | 1.61e-13 | 1 |
bone marrow cancer | 4.23e-13 | 1 |
myeloma | 4.23e-13 | 1 |
lymphoma | 3.26e-11 | 10 |