FFCP PHASE1:Hg19::chr13:93879225..93879248,+: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=10082 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=4454 | |||
|TSSclassifier=strong | |||
|UniProt=Q9Y625 | |||
|association_with_transcript=130bp_to_ENST00000377047_5end | |||
|coexpression_cluster_id=C1192 | |||
|description=CAGE_peak_9_at_GPC6_5end | |||
|id=chr13:93879225..93879248,+ | |||
|ontology_enrichment_celltype=CL:0000055!6.93e-22!180;CL:0000057!1.12e-11!75;CL:0000393!2.32e-07!60;CL:0000211!2.32e-07!60;CL:0000183!4.24e-07!59;CL:0000680!4.98e-07!57;CL:0000056!4.98e-07!57;CL:0000355!4.98e-07!57 | |||
|ontology_enrichment_celltype_v019=CL:0002494;7.00e-07;16 | |||
|ontology_enrichment_celltype_v019_2=CL:0000187,9.23e-08,55;CL:0000393,3.74e-07,61;CL:0000211,3.74e-07,61;CL:0000680,4.84e-07,58;CL:0000056,4.84e-07,58;CL:0000355,4.84e-07,58;CL:0002494,6.72e-07,16 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000475!1.29e-13!365;UBERON:0000481!2.02e-10!347;UBERON:0000119!9.92e-09!312;UBERON:0000483!1.68e-08!309;UBERON:0002100!3.27e-08!216;UBERON:0005256!2.45e-07!143 | |||
|ontology_enrichment_uberon_v019=UBERON:0003688;1.60e-08;6!UBERON:0002358;1.60e-08;6!UBERON:0003684;1.60e-08;6!UBERON:0001178;1.60e-08;6!UBERON:0000488;3.31e-07;4 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0003688,1.74e-08,6;UBERON:0002358,1.74e-08,6;UBERON:0003684,1.74e-08,6;UBERON:0001178,1.74e-08,6;UBERON:0000488,4.00e-07,4 | |||
|phase1_expression=0.908391896352783,0.856402095563933,2.25527046553554,2.00146596706261,2.68176656656373,5.23403114460221,0,0,0.522371256399677,0.491467873003018,0.697801167972428,0,0,0.866364470720326,0.662794751455832,0,0.602694528023977,0,0.487932798790507,0.492484232307152,1.02000345622126,0.940364164434263,1.14494394852423,2.46373965131192,1.75759695432724,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.344745680736619,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,7.31420598941885,5.36560687762909,1.66221330396589,3.61439152384566,1.00267582127178,1.88300474649071,0,6.32625331393427,4.34860158954712,6.43015252641436,6.14843499851882,0.0654895377488563,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.47880366186723,0.25326102332916,1.45650098894541,8.3182620017156,0.354668382198357,0.560677600142307,2.1349799145941,1.97334038733728,2.17847724779836,0.808264032418128,0.490385709340376,0.605429710579726,0.576175924479999,0,0.312160076830321,0,0,1.05691048779388,0.161872944368132,0.421352420106746,0.408308342509787,0.245668634623536,0.309977343527296,1.18800285728205,0.247266929278557,0,1.43723628363248,0.505008341862199,0.500474079487857,0,0.438977620880838,0,0.45071417671979,0.567160915800105,1.79389635688862,0.213557388818567,0.211931901159562,1.80054657650641,0.412210116953756,1.28820270022815,0.744467425326359,0.337552664482532,1.16924406193438,2.52433774244115,1.28869858099219,0.646584227275248,3.19508633264953,0.604512589365842,0,0,0,0,0.121973706129595,0,0.116193942869518,0.10366105501537,0.252320850875628,0.72995471815166,0,0.643240938192885,0,0.928735856063958,0,0,0,0,0,0,0,0,0,0,0,0,0.4115740113314,0,1.26755034821831,2.94848165003288,0.590789906681404,0,0,3.08822058537346,0.219500570817251,0,0,0.0925884451585296,0,0,0,1.39116485970092,14.4412693910061,0,0,0,0,0,0,0,0,0,0,0,0.268675568108545,0.290633938513962,0,0,0,0.207328115540772,0,0,0,0,0,0,0,0,0,0,4.79556075716608,0.2933531432838,5.68795549334222,0,3.381211010224,0.26593811658487,0,0,0,0,5.57614175266775,0.542621605391443,0.823240336780769,0.325736184293735,3.55391948742546,0.791951872933429,2.1100756394171,0,0.199945982364114,0,0,0,0,2.29723871668228,0,0.434343920002738,0.61642896765115,0.358121926479791,0,0,0,0,0.76228387266739,0,0.773288812777695,0.670065061337395,0,0,0,0,4.53958519360818,1.50051156317903,0.813795071099207,0.207970861530807,0,0,0.819989904948992,0.601892199455438,0,0,0,0,0.260650843404249,0.195801157462741,1.02943027143257,0,0,0,0,0,0,3.2254015016441,0.767309866440312,0.841980283299221,3.20347873139252,1.53512174720011,5.30817939773905,0,0.771048469013278,1.06537035187876,0.9033987161519,1.55776328755086,0.464841513839837,0,0,0,2.41110341145674,1.82091168006717,3.14698595902618,0,0.770153371044148,0.784349769176855,0,1.68882606228601,0,0,0.215915916102139,0,0.541892875087706,2.00675909541941,0.254876273045038,0,0.223874754722178,0,0,0,0.328014645699706,0.976135183992909,0.412164046590889,0.732555718546747,0.577566499444116,0,0,1.6068392984416,2.03008508413456,1.3864375540318,2.6095624703442,0.413509717453592,2.14840489736547,1.0151168573996,1.70453254832202,10.2386840993748,0,0,0.127612712494584,0.10115778085555,0,9.75918275174984,2.0911118104818,0.616067160352178,0,0,0.18532421910392,0.858749320451947,0,1.2655176988749,3.8126038784765,0,0.855877976067841,2.86382923133343,0.78494864019923,2.15846949099978,2.74537029736055,1.53156123049392,0,0,1.26377536871694,0,0.487426979262569,0,2.59349831675173,2.40389234321312,1.13008116620243,2.2054613741845,0,0,0,0.655894752046633,0,0.6196469961995,0.563391205064483,0.286822704408103,0.392996164052485,0,1.41904425628239,0.844430541190656,0.329294892959902,0,0.349934720244983,0,0,0,0.282431402330337,0,0,0,0,0,0,0,0,0,0,0,0,0.106824071127473,0,0,0,0,0,0,0,0,0.211673582723883,0,1.12318871245384,0,0,0,0,0,0,0,0,0.307240764308458,0,0.166849141711909,0,0,0,0,0,0,0,0.146508179271894,0,0,0,0,0,0,0,0,0.556543525114529,0,0,0.19924798825107,0.552567831062295,0,0.306806047506464,0,0,0.0898683511473268,0,0,0.197286811273867,0,0,0,0,1.99613798001194,0.260427761085233,0,0.724999575434793,0,0.508507300585533,0,1.03423011972439,1.45802306691627,0.868124974666461,0.885741385813839,0,0,0.110579259931225,0,0.658156191461918,0,0,0.230850775511391,11.7360317522411,0,0,0,0.31900115973192,0,0,0,1.56980256395025,0,0.225595660617181,0,0,0,0.158936578980379,0,0,0,0,0.995261931078505,0.176915129006678,2.4441205797345,0,0.247127877893006,0.522109747527277,0.067401132980677,0,0,0,0,0,0,0,0.61214552326098,1.13735843331278,0.150323419414493,0,0,0,0,0,0,0,0,0,0,0.34945333648406,2.0638323896594,0,0,0,0.290967049465258,41.7451479250796,0.225980740780532,2.32971271899477,0.397429223405979,0.0633107959558787,0,4.80952921509202,1.06726497369676,0,0,0,1.71594997861965,0.432164393964449,0,0,1.35904206073614,1.15063130943567,0,1.73370353940911,0,0.136905378891993,0,0.859530882839914,0,0.5585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| |||
|short_description=p9@GPC6 | |||
}} |
Revision as of 18:16, 11 January 2014
Short description: | p9@GPC6 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_9_at_GPC6_5end |
Coexpression cluster: | C1192_extraskeletal_Cardiac_Lens_cholangiocellular_pineal_Fibroblast_rectum |
Association with transcript: | 130bp_to_ENST00000377047_5end |
EntrezGene: | GPC6 |
HGNC: | 4454 |
UniProt: | Q9Y625 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
muscle cell | 9.23e-08 | 55 |
electrically responsive cell | 3.74e-07 | 61 |
electrically active cell | 3.74e-07 | 61 |
muscle precursor cell | 4.84e-07 | 58 |
myoblast | 4.84e-07 | 58 |
multi-potent skeletal muscle stem cell | 4.84e-07 | 58 |
cardiocyte | 6.72e-07 | 16 |
Ontology term | p-value | n |
---|---|---|
omentum | 1.74e-08 | 6 |
peritoneum | 1.74e-08 | 6 |
abdominal cavity | 1.74e-08 | 6 |
visceral peritoneum | 1.74e-08 | 6 |
atypical epithelium | 4.00e-07 | 4 |