FFCP PHASE1:Hg19::chr13:75900829..75900843,-: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=9882 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=19165 | |||
|TSSclassifier=not | |||
|UniProt= | |||
|association_with_transcript=-443bp_to_ENST00000488955_5end | |||
|coexpression_cluster_id=C23 | |||
|description=CAGE_peak_9_at_TBC1D4_5end | |||
|id=chr13:75900829..75900843,- | |||
|ontology_enrichment_celltype=CL:0000791!1.04e-21!18;CL:0000789!1.04e-21!18;CL:0002420!1.04e-21!18;CL:0002419!1.04e-21!18;CL:0000790!1.04e-21!18;CL:0000084!2.79e-19!25;CL:0000827!2.79e-19!25;CL:0002087!6.05e-16!119;CL:0000625!4.90e-15!11;CL:0000838!9.29e-15!52;CL:0000542!2.65e-14!53;CL:0000051!2.65e-14!53;CL:0000738!3.00e-13!140;CL:0002031!9.35e-13!124;CL:0000624!5.81e-10!6;CL:0000037!5.13e-09!172;CL:0000566!5.13e-09!172;CL:0000988!3.43e-08!182;CL:0002032!3.74e-08!165;CL:0000837!3.74e-08!165;CL:0002139!5.73e-08!24;CL:0000115!4.86e-07!35 | |||
|ontology_enrichment_celltype_v019=CL:0000791;2.32e-46;18!CL:0000789;2.32e-46;18!CL:0002419;2.32e-46;18!CL:0000084;3.24e-36;25!CL:0000625;5.69e-31;11!CL:0000624;5.43e-20;6!CL:0000898;5.02e-11;3!CL:0000542;6.50e-11;53!CL:0000226;5.48e-10;3!CL:0000842;5.48e-10;3!CL:0000815;6.58e-08;2!CL:0000792;6.58e-08;2!CL:0002677;6.58e-08;2!CL:0002087;8.54e-07;104 | |||
|ontology_enrichment_celltype_v019_2=CL:0000791,1.45e-46,18;CL:0000789,1.45e-46,18;CL:0002420,1.45e-46,18;CL:0002419,1.45e-46,18;CL:0000790,1.45e-46,18;CL:0000084,2.49e-36,25;CL:0000827,2.49e-36,25;CL:0000625,3.54e-31,11;CL:0000838,6.99e-21,52;CL:0000542,2.21e-20,53;CL:0000051,2.21e-20,53;CL:0002087,3.03e-20,115;CL:0000624,5.36e-20,6;CL:0000738,7.68e-16,136;CL:0002031,5.14e-15,120;CL:0000037,2.73e-11,168;CL:0000898,4.95e-11,3;CL:0000988,2.57e-10,177;CL:0000226,7.46e-10,3;CL:0000842,7.46e-10,3;CL:0002032,2.37e-09,161;CL:0000837,2.37e-09,161;CL:0000815,6.48e-08,2;CL:0000792,6.48e-08,2;CL:0002677,6.48e-08,2 | |||
|ontology_enrichment_development_v019=CL:0000790;2.32e-46;18!CL:0000051;6.50e-11;53 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000178!7.06e-10!15;UBERON:0000179!7.06e-10!15;UBERON:0000463!7.06e-10!15;UBERON:0002193!1.56e-09!112;UBERON:0002390!4.27e-08!102;UBERON:0003061!4.27e-08!102 | |||
|ontology_enrichment_uberon_v019=UBERON:0000178;2.80e-18;15!UBERON:0000179;2.80e-18;15!UBERON:0000463;2.80e-18;15!UBERON:0002390;4.80e-07;32 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000178,4.50e-18,15;UBERON:0000179,4.50e-18,15;UBERON:0000463,4.50e-18,15;UBERON:0002390,3.16e-07,98;UBERON:0003061,3.16e-07,98;UBERON:0002193,6.11e-07,108 | |||
|phase1_expression=0.181678379270557,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.154816123316076,0,0,0,0,0,0,0.553995408531877,1.20326668482085,0.651032612147555,0,0.647787332037959,0,0,0,1.21292030593908,0,0,1.23882548358041,0,0.512321413058201,3.31075121844019,0,0,2.70852973188684,0.188242339542605,0.272906150057846,0.898893937780338,0,0,0,0,0,4.26224750532694,0,0,5.60540024096017,0,0.521482918420201,2.82345498116652,0,0.368277635987565,3.16462387440884,0,0,0,0.112328631146495,0,0,0,0,0,0,0,0,0,0,0,0,0,0.569212969109448,0,0,0,0,0,8.26181034478099,5.89516144123747,5.14003747498773,3.67810289859492,14.0146574652444,13.7299863663073,5.84480185223734,2.45103005147382,7.9543595018206,6.64601683750863,6.49929273036037,1.66518715643378,2.34106825607781,1.15106533222573,1.65810010671509,3.47763702882063,12.159498179289,11.2367147797679,8.36284190439814,1.69964014046349,9.19729184644611,11.6833331464094,8.8556892206826,5.09704662918555,2.60433381542567,1.90090408889675,4.66782869141096,3.71161172347813,2.49861453104692,5.20909954496837,1.64225599384209,1.20964045934839,1.33720097891754,2.75166367377318,0,0,0,0,0,0,0,0,0,0,0.087834785693126,0.0654895377488563,0,0,0,0,0,0,0,0,0.39752481473341,0.860234595106124,0,0,0,0.275118041940067,0,0,0.35576626268671,0.66944122552934,0,2.28081631715554,0.24406205754817,0.367663080345869,0.81014194788176,0.625098097988558,0.44905874525234,0.337834441449967,0,0,0.183201743930407,0,0,0,0,0,0,0,0,0,0,0,0,0.134710672069688,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.226864366320042,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.21446636387394,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.44366447761074,0,0.190254152234598,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.129271715757778,0,0,0,0,0,0,0,0,0,0,0,0.355391948742546,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.56139988262505,0.862510299438069,1.92514554419623,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.10152039184331,3.23571301227925,2.02782359826544,0,0,0,0.496215615637554,0.460385919864187,0,0.128139149255701,0.511707249066704,0.482561763430822,0,0,0,0,0,0.116210378459959,0,0,0,0,0,0,0,0,0,0,0,0,0.170093705276516,1.72732732881711,0,0,0,0,0,0,0,0,0,0,0,0.309123034943167,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.376575203107117,0,0,0,0,2.02979043692868,1.52927441428475,1.13929437434833,2.1440859791201,2.46817363851717,0,2.70015718619057,0.79312517629427,0,0,0,0,0,0,0.159426272728822,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.146508179271894,0,0,0,0,0,0,0,0,0,0,0,0,1.93398740871803,0,0,0.123084805461069,0,0,0,0,0.0986434056369336,7.18449277040819,0,0,0,0,0,0,0.724999575434793,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.230850775511391,0,0.23056390438806,0,0,0,0,0.533034776018635,3.06579894587209,0,0,0,0,0,0,0.317873157960757,0,0,0,0,0,0,0,0,0,0,0.067401132980677,0,0,0,0,0,0,0,0,0.063186579628488,0,0,0,0,0.313932918407225,0,0,0,0,0,0,0.17472666824203,0,0,0,0,0,0.264768380074501,0,0,0,0,0,0,0.213452994739353,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.429765441419957,0,0.837847203816763,0,0,0,0,0,0,0.360299883542404,0,0,0,0,0,0.0846733320657845,0,0,0,0,0,0.2249738915515,0,0,0,0.0788057072991982,0.0524545881349981,0,0,0,0,0,0,0,0,0,0,0.082092520749339,0,0,0,0,0,0,0,0,0.213574825135389,1.10043013569766,0,0,0,1.58330377895165,0,0,0,0,0,0,0,0.122026264901963,0,0,0,0,0,0,3.1846314683746,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.343395705182793,0,0,0,1.07220795687463,0.260994291965212,0,0,0,0.179088841081487,0,0.219284049578707,0,0,0,0,0,0,0,0.389720617678777,0,0,0,0,0,0.19998739585493,0,0.688859918643263,0,0,0,0,0,0,0.471797825567689,0,0.169732529954025,4.25149840203366,0.495743057036009,0.558644917973244,0,0,0,0,0,0.0642292250964595,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0752103283492573,0,0,0,0,0,0,0,0,0.0634158101939068,0,0,0,16.5318969698043,0,0,0,0,0,0.177404740325278,0,0,0,0,0,0,0,0.157115589916002,0,0,0,0,0.0714765441766563,0,0,0,0,0,0,0,0,0,0,0,0.22910686854405,0,0,0,0,0,0,0.102662806856247,0,0,0,0,0,0,0,0,0.0771741581079447,0,0,0,0,0,0,0,0,0.657887425858975,0.45120521581504,0,0,0,0,0,0.458729283404541,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0757786982182394,0,0,0,0,0,0.452122368852043,0.682821857254437,0,0,0,0.217716747896961,0.342233301085281,0.80822463617505,0.143444410785353,0,0,0,0,0,0,0.122241444182866,0,0,0.402547587182052,0.320568492303233 | |||
|short_description=p9@TBC1D4 | |||
}} |
Revision as of 18:03, 11 January 2014
Short description: | p9@TBC1D4 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | No |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_9_at_TBC1D4_5end |
Coexpression cluster: | C23_CD4_CD8_Natural_Peripheral_Basophils_CD19_CD14 |
Association with transcript: | -443bp_to_ENST00000488955_5end |
EntrezGene: | TBC1D4 |
HGNC: | 19165 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
mature alpha-beta T cell | 1.45e-46 | 18 |
alpha-beta T cell | 1.45e-46 | 18 |
immature T cell | 1.45e-46 | 18 |
mature T cell | 1.45e-46 | 18 |
immature alpha-beta T cell | 1.45e-46 | 18 |
T cell | 2.49e-36 | 25 |
pro-T cell | 2.49e-36 | 25 |
CD8-positive, alpha-beta T cell | 3.54e-31 | 11 |
lymphoid lineage restricted progenitor cell | 6.99e-21 | 52 |
lymphocyte | 2.21e-20 | 53 |
common lymphoid progenitor | 2.21e-20 | 53 |
nongranular leukocyte | 3.03e-20 | 115 |
CD4-positive, alpha-beta T cell | 5.36e-20 | 6 |
leukocyte | 7.68e-16 | 136 |
hematopoietic lineage restricted progenitor cell | 5.14e-15 | 120 |
hematopoietic stem cell | 2.73e-11 | 168 |
naive T cell | 4.95e-11 | 3 |
hematopoietic cell | 2.57e-10 | 177 |
single nucleate cell | 7.46e-10 | 3 |
mononuclear cell | 7.46e-10 | 3 |
hematopoietic oligopotent progenitor cell | 2.37e-09 | 161 |
hematopoietic multipotent progenitor cell | 2.37e-09 | 161 |
regulatory T cell | 6.48e-08 | 2 |
CD4-positive, CD25-positive, alpha-beta regulatory T cell | 6.48e-08 | 2 |
naive regulatory T cell | 6.48e-08 | 2 |
Ontology term | p-value | n |
---|---|---|
blood | 4.50e-18 | 15 |
haemolymphatic fluid | 4.50e-18 | 15 |
organism substance | 4.50e-18 | 15 |
hematopoietic system | 3.16e-07 | 98 |
blood island | 3.16e-07 | 98 |
hemolymphoid system | 6.11e-07 | 108 |