FFCP PHASE1:Hg19::chr13:75884363..75884374,-: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |||
|TSSclassifier=not | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|coexpression_cluster_id=C80 | |||
|description=CAGE_peak_at_chr13:75884363..75884374,- | |||
|id=chr13:75884363..75884374,- | |||
|ontology_enrichment_celltype=CL:0000451!3.80e-38!10;CL:0000990!3.98e-36!8;CL:0000453!3.15e-34!5;CL:0000738!5.26e-22!140;CL:0000840!3.32e-18!5;CL:0001029!3.32e-18!5;CL:0000037!4.50e-17!172;CL:0000566!4.50e-17!172;CL:0000988!6.95e-16!182;CL:0002031!7.77e-15!124;CL:0001014!9.02e-15!2;CL:0001016!9.02e-15!2;CL:0002032!1.17e-14!165;CL:0000837!1.17e-14!165;CL:0002009!3.20e-14!65;CL:0002087!1.10e-13!119;CL:0000557!7.94e-13!71;CL:0000763!1.06e-11!112;CL:0000049!1.06e-11!112;CL:0002194!2.80e-10!63;CL:0000576!2.80e-10!63;CL:0000040!2.80e-10!63;CL:0000559!2.80e-10!63;CL:0000839!4.51e-09!70;CL:0002057!9.10e-09!42;CL:0000766!3.26e-08!76;CL:0000860!4.16e-08!45 | |||
|ontology_enrichment_celltype_v019=CL:0000453;2.28e-123;5!CL:0000990;7.50e-69;8!CL:0000451;1.91e-56;10!CL:0001014;1.88e-50;2!CL:0001016;1.88e-50;2!CL:0000840;1.33e-17;5 | |||
|ontology_enrichment_celltype_v019_2=CL:0000453,2.28e-123,5;CL:0000990,7.50e-69,8;CL:0000451,1.91e-56,10;CL:0001014,1.88e-50,2;CL:0001016,1.88e-50,2;CL:0000840,1.33e-17,5;CL:0001029,1.33e-17,5;CL:0000738,7.06e-09,136;CL:0000763,2.66e-08,108;CL:0000049,2.66e-08,108;CL:0002032,1.72e-07,161;CL:0000837,1.72e-07,161;CL:0000037,3.55e-07,168;CL:0000988,8.33e-07,177 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease=DOID:630!5.33e-08!1;DOID:0050177!5.33e-08!1;DOID:0050427!5.33e-08!1 | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002193!6.25e-17!112;UBERON:0002390!8.07e-15!102;UBERON:0003061!8.07e-15!102;UBERON:0002405!1.54e-14!115;UBERON:0002371!4.01e-11!80;UBERON:0001474!3.48e-10!86;UBERON:0004177!6.74e-09!7;UBERON:0004765!2.52e-08!101;UBERON:0001434!2.52e-08!101;UBERON:0000029!4.66e-08!1;UBERON:0002372!1.54e-07!1;UBERON:0001961!1.54e-07!1;UBERON:0001744!1.54e-07!1;UBERON:0001735!1.54e-07!1;UBERON:0002370!2.93e-07!4;UBERON:0005058!2.93e-07!4;UBERON:0009113!2.93e-07!4;UBERON:0003295!2.93e-07!4;UBERON:0005562!2.93e-07!4 | |||
|ontology_enrichment_uberon_v019=UBERON:0002106;1.54e-09;3 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002106,1.54e-09,3;UBERON:0004854,1.54e-09,3;UBERON:0009034,1.54e-09,3;UBERON:0002095,1.54e-09,3;UBERON:0004782,1.54e-09,3;UBERON:0003281,1.54e-09,3;UBERON:0009664,1.54e-09,3;UBERON:0002296,1.54e-09,3;UBERON:0005602,1.54e-09,3;UBERON:0001179,1.54e-09,3;UBERON:0006293,1.54e-09,3 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0764134057479513,0.164201178899891,0.0787107813136792,0,0,0,0,0,0,0,0,0,0,0.200544447470142,0,0.223915474239924,0,0,0,0,0,0,0,0.309706370895104,0,0,0,0,0,1.35426486594342,0,0,0.449446968890169,0,0.320929027076094,0.639337125799041,0,0,0,0,0,0,0,0,0,0,0,0.316462387440884,0,0,0,0,0,0,0.285012743741249,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.324547393654683,0.696518949197069,0,0,0,0.371457501329565,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.128343036279748,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.215714200818617,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.6001024709939,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,59.8430551526991,17.0236430002749,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.129282956361551,0,0,0,0,0,0,0.992332043623902,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,34.2954143557324,28.3002109867463,23.5534167728416,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.79835236589801,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.193766729508018,0.248298857183432,0,0,0,0,0,0.134704106029175,0,0,0,0,0,0,0,0,0,0,0.201273793591026,0.641136984606466 | |||
|short_description=p@chr13:75884363..75884374,- | |||
}} |
Revision as of 18:03, 11 January 2014
Short description: | p@chr13:75884363..75884374, - |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | No |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr13:75884363..75884374, - |
Coexpression cluster: | C80_immature_migratory_CD14_Dendritic_splenic_cord_Mast |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
Langerhans cell | 2.28e-123 | 5 |
conventional dendritic cell | 7.50e-69 | 8 |
dendritic cell | 1.91e-56 | 10 |
CD1a-positive Langerhans cell | 1.88e-50 | 2 |
immature CD1a-positive Langerhans cell | 1.88e-50 | 2 |
immature conventional dendritic cell | 1.33e-17 | 5 |
common dendritic progenitor | 1.33e-17 | 5 |
leukocyte | 7.06e-09 | 136 |
myeloid cell | 2.66e-08 | 108 |
common myeloid progenitor | 2.66e-08 | 108 |
hematopoietic oligopotent progenitor cell | 1.72e-07 | 161 |
hematopoietic multipotent progenitor cell | 1.72e-07 | 161 |
hematopoietic stem cell | 3.55e-07 | 168 |
hematopoietic cell | 8.33e-07 | 177 |
Ontology term | p-value | n |
---|---|---|
spleen | 1.54e-09 | 3 |
gastrointestinal system mesentery | 1.54e-09 | 3 |
stomach region | 1.54e-09 | 3 |
mesentery | 1.54e-09 | 3 |
gastrointestinal system serosa | 1.54e-09 | 3 |
mesentery of stomach | 1.54e-09 | 3 |
gut mesentery | 1.54e-09 | 3 |
dorsal mesentery | 1.54e-09 | 3 |
dorsal mesogastrium | 1.54e-09 | 3 |
peritoneal cavity | 1.54e-09 | 3 |
spleen primordium | 1.54e-09 | 3 |