FFCP PHASE1:Hg19::chr13:75884320..75884362,-: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |||
|TSSclassifier=not | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|coexpression_cluster_id=C61 | |||
|description=CAGE_peak_at_chr13:75884320..75884362,- | |||
|id=chr13:75884320..75884362,- | |||
|ontology_enrichment_celltype=CL:0000990!3.90e-27!8;CL:0000451!6.29e-22!10;CL:0000453!5.01e-20!5;CL:0000840!2.20e-16!5;CL:0001029!2.20e-16!5;CL:0000738!2.90e-12!140;CL:0002031!8.38e-11!124;CL:0002032!2.16e-10!165;CL:0000837!2.16e-10!165;CL:0000037!1.05e-09!172;CL:0000566!1.05e-09!172;CL:0001014!5.02e-09!2;CL:0001016!5.02e-09!2;CL:0000988!8.13e-09!182;CL:0002087!3.39e-08!119;CL:0000557!3.66e-08!71;CL:0002009!5.73e-08!65;CL:0000763!2.27e-07!112;CL:0000049!2.27e-07!112 | |||
|ontology_enrichment_celltype_v019=CL:0000990;1.11e-116;8!CL:0000451;1.89e-95;10!CL:0000453;2.34e-83;5!CL:0000840;1.81e-68;5!CL:0001014;2.18e-34;2!CL:0001016;2.18e-34;2!CL:0000047;2.02e-09;2 | |||
|ontology_enrichment_celltype_v019_2=CL:0000990,1.19e-116,8;CL:0000451,2.01e-95,10;CL:0000453,2.34e-83,5;CL:0000840,1.94e-68,5;CL:0001029,1.94e-68,5;CL:0001014,2.18e-34,2;CL:0001016,2.18e-34,2;CL:0000763,1.18e-11,108;CL:0000049,1.18e-11,108;CL:0000738,2.59e-11,136;CL:0002032,1.97e-09,161;CL:0000837,1.97e-09,161;CL:0002009,2.10e-09,61;CL:0000037,5.28e-09,168;CL:0000557,1.49e-08,67;CL:0000988,1.68e-08,177 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002390!1.98e-09!102;UBERON:0003061!1.98e-09!102;UBERON:0002193!3.19e-09!112;UBERON:0002405!7.39e-09!115;UBERON:0004177!1.28e-08!7;UBERON:0002371!6.03e-08!80;UBERON:0001474!3.73e-07!86 | |||
|ontology_enrichment_uberon_v019=UBERON:0002106;7.70e-07;3 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002405,3.24e-08,93;UBERON:0002390,8.88e-08,98;UBERON:0003061,8.88e-08,98;UBERON:0002371,1.59e-07,76;UBERON:0002193,5.09e-07,108;UBERON:0001474,5.82e-07,82;UBERON:0002106,7.70e-07,3;UBERON:0004854,7.70e-07,3;UBERON:0009034,7.70e-07,3;UBERON:0002095,7.70e-07,3;UBERON:0004782,7.70e-07,3;UBERON:0003281,7.70e-07,3;UBERON:0009664,7.70e-07,3;UBERON:0002296,7.70e-07,3;UBERON:0005602,7.70e-07,3;UBERON:0001179,7.70e-07,3;UBERON:0006293,7.70e-07,3 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.305653622991805,0.164201178899891,0.157421562627358,0,0,0,0,0,0,0,0,0,0,0,0.217010870715852,0,0,0,0,0,0,0,0,0.929119112685311,0,0,0,0.344745680736619,0,0,0,0,0.449446968890169,0,0.320929027076094,0.639337125799041,0,0,0,0,0,0.622822248995575,0,0,0.217188844705117,0,0,2.53169909952708,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.128091319725675,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,4.54366351116557,2.43781632218974,4.38761269712255,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.121973706129595,0,0,0,0,0,0,0,0,0,0,0,0,0,0.110293972732394,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.12624243342638,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.30139853857622,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.278406173895242,0,0,0,0,0,0,0,0,0,0,0,0,0,0.140669416410513,0,0,0,0,0.276283915531148,0,0,3.07712013652674,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.611030144933625,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0969890164884194,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.262887354279314,0,0,0,0,0,0,0.0671834724867263,0,0,0,0,0,0,0,0,0,0,0,0,277.392808283,69.6421759102155,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.106787412567695,0.157204305099666,0.414239055347196,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,286.444653993901,213.779528064201,161.76617491903,0,0,0,0.19998739585493,0,0.172214979660816,0,0,0,0,0,0,0,0,0,0.212574920101683,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.548257766857182,0,0.351742488719241,0,0,0,0,0,0,0.115233987555779,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.198950775161368,0,0,0.109940516745429,0,0.0771741581079447,0.218559560503957,0,0,0,0,0,0,0,0,0.0644578879735772,9.59435096879318,0,0,0,0,0,0.143339583151451,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.267964130156178,0,0,0,0,0.710478008196067,0.620747142958579,0,0,0,0.217716747896961,0,0.336760265072938,0.0717222053926763,0,0,0,0,0,0,0,0,0,0.603821380773079,0.320568492303233 | |||
|short_description=p@chr13:75884320..75884362,- | |||
}} |
Revision as of 18:03, 11 January 2014
Short description: | p@chr13:75884320..75884362, - |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | No |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr13:75884320..75884362, - |
Coexpression cluster: | C61_migratory_Dendritic_immature_Macrophage_xeroderma_cord_b |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
conventional dendritic cell | 1.19e-116 | 8 |
dendritic cell | 2.01e-95 | 10 |
Langerhans cell | 2.34e-83 | 5 |
immature conventional dendritic cell | 1.94e-68 | 5 |
common dendritic progenitor | 1.94e-68 | 5 |
CD1a-positive Langerhans cell | 2.18e-34 | 2 |
immature CD1a-positive Langerhans cell | 2.18e-34 | 2 |
myeloid cell | 1.18e-11 | 108 |
common myeloid progenitor | 1.18e-11 | 108 |
leukocyte | 2.59e-11 | 136 |
hematopoietic oligopotent progenitor cell | 1.97e-09 | 161 |
hematopoietic multipotent progenitor cell | 1.97e-09 | 161 |
macrophage dendritic cell progenitor | 2.10e-09 | 61 |
hematopoietic stem cell | 5.28e-09 | 168 |
granulocyte monocyte progenitor cell | 1.49e-08 | 67 |
hematopoietic cell | 1.68e-08 | 177 |
Ontology term | p-value | n |
---|---|---|
immune system | 3.24e-08 | 93 |
hematopoietic system | 8.88e-08 | 98 |
blood island | 8.88e-08 | 98 |
bone marrow | 1.59e-07 | 76 |
hemolymphoid system | 5.09e-07 | 108 |
bone element | 5.82e-07 | 82 |
spleen | 7.70e-07 | 3 |
gastrointestinal system mesentery | 7.70e-07 | 3 |
stomach region | 7.70e-07 | 3 |
mesentery | 7.70e-07 | 3 |
gastrointestinal system serosa | 7.70e-07 | 3 |
mesentery of stomach | 7.70e-07 | 3 |
gut mesentery | 7.70e-07 | 3 |
dorsal mesentery | 7.70e-07 | 3 |
dorsal mesogastrium | 7.70e-07 | 3 |
peritoneal cavity | 7.70e-07 | 3 |
spleen primordium | 7.70e-07 | 3 |