FFCP PHASE1:Hg19::chr13:48807307..48807333,+: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=9445 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=6174 | |||
|TSSclassifier=strong | |||
|UniProt=Q5W0A2 | |||
|association_with_transcript=-5bp_to_ENST00000378549_5end | |||
|coexpression_cluster_id=C3376 | |||
|description=CAGE_peak_2_at_ITM2B_5end | |||
|id=chr13:48807307..48807333,+ | |||
|ontology_enrichment_celltype=CL:0000766!2.66e-15!76;CL:0002057!3.36e-12!42;CL:0000839!1.08e-11!70;CL:0000557!1.84e-11!71;CL:0000860!9.60e-10!45;CL:0002194!1.08e-09!63;CL:0000576!1.08e-09!63;CL:0000040!1.08e-09!63;CL:0000559!1.08e-09!63;CL:0002009!2.28e-09!65 | |||
|ontology_enrichment_celltype_v019=CL:0000473;6.89e-10;39!CL:0000234;6.89e-10;39!CL:0000860;1.17e-09;33!CL:0002057;1.17e-09;33!CL:0000766;8.25e-09;69!CL:0000576;2.28e-08;48 | |||
|ontology_enrichment_celltype_v019_2=CL:0000766,3.17e-17,72;CL:0000473,4.04e-14,48;CL:0000234,4.04e-14,48;CL:0000839,2.30e-13,66;CL:0000557,4.29e-13,67;CL:0000860,3.36e-12,42;CL:0002057,3.36e-12,42;CL:0002194,2.91e-11,59;CL:0000576,2.91e-11,59;CL:0000040,2.91e-11,59;CL:0000559,2.91e-11,59;CL:0002009,7.31e-11,61;CL:0000738,6.06e-07,136 | |||
|ontology_enrichment_development_v019=CL:0002057;3.46e-09;42 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0007023!7.67e-36!115;UBERON:0002193!5.67e-12!112;UBERON:0002390!3.02e-11!102;UBERON:0003061!3.02e-11!102;UBERON:0001049!3.80e-10!57;UBERON:0005068!3.80e-10!57;UBERON:0006241!3.80e-10!57;UBERON:0007135!3.80e-10!57;UBERON:0002371!1.90e-09!80;UBERON:0002616!7.65e-09!59;UBERON:0000062!3.49e-08!511;UBERON:0003081!4.63e-08!216;UBERON:0001474!5.06e-08!86;UBERON:0002405!1.59e-07!115;UBERON:0004765!1.76e-07!101;UBERON:0001434!1.76e-07!101;UBERON:0003080!3.01e-07!42;UBERON:0000467!6.62e-07!625;UBERON:0000480!7.27e-07!626;UBERON:0002780!7.60e-07!41;UBERON:0001890!7.60e-07!41;UBERON:0006240!7.60e-07!41;UBERON:0003075!1.00e-06!86;UBERON:0007284!1.00e-06!86 | |||
|ontology_enrichment_uberon_v019=UBERON:0007023;9.00e-10;114 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0007023,1.19e-35,114;UBERON:0002193,3.35e-13,108;UBERON:0002390,1.69e-12,98;UBERON:0003061,1.69e-12,98;UBERON:0002405,8.48e-11,93;UBERON:0002371,9.53e-11,76;UBERON:0001049,1.01e-09,56;UBERON:0005068,1.01e-09,56;UBERON:0006241,1.01e-09,56;UBERON:0007135,1.01e-09,56;UBERON:0001474,4.05e-09,82;UBERON:0004765,4.29e-09,90;UBERON:0000073,7.52e-09,53;UBERON:0002616,7.52e-09,53;UBERON:0003081,9.28e-09,203;UBERON:0001434,2.35e-08,100;UBERON:0003075,1.85e-07,82;UBERON:0007284,1.85e-07,82;UBERON:0002780,7.60e-07,41;UBERON:0001890,7.60e-07,41;UBERON:0003080,7.60e-07,41;UBERON:0006240,7.60e-07,41 | |||
|phase1_expression=183.131806304721,195.045577264686,223.694639300306,173.126806150916,221.245741741507,207.616568735888,91.1879561405918,105.497218862281,143.652095509911,50.3754569828093,36.2856607345662,77.7651284783413,65.6779775788849,104.458801898279,116.320478880498,116.984575482609,131.387407109227,138.028607083214,139.548780454085,94.3107304868195,58.1401970046121,89.0211408997769,83.0084362680064,63.9203565090369,57.8751568532041,3.97349709889347,3.53032534634767,4.80135766013443,223.824273527026,140.865389101677,162.866561728512,50.568167346341,60.8435955932065,63.5976897486875,10.3031376771801,13.6482463187925,93.0713392691466,138.498852132969,178.083469353486,159.068968234719,276.311695212067,378.307801910168,361.378521390764,171.860718237445,167.399043054143,159.862896322771,194.310674853152,159.94430844049,146.181407062489,228.71545189611,189.558922831534,213.779935819281,243.390450600053,192.999920391564,196.368405561796,195.960275463852,151.190007132047,149.665840640426,232.317674309515,215.664306195135,193.07981199131,215.063047721739,191.086184001523,193.506036741843,255.674339231783,201.421754765355,176.258696465748,218.586338773367,186.169401876012,195.68714907931,252.451592598115,257.05778991932,205.384089449134,210.199009880382,149.248218575461,260.81535501242,195.901132719487,181.113332766857,251.696268767627,146.781563026743,163.90734201205,217.735671287444,139.037033124445,141.449900316892,125.420804794761,97.7212209677301,111.710480383047,125.870784350032,144.768827139885,117.34861180785,124.657640234969,87.4983412162699,82.1887440469242,85.9113635763668,82.3947587582858,75.327848245672,158.351364941636,147.379036030937,170.238041171594,134.585128789496,184.146080647979,189.379122293893,231.843806805414,130.238824098768,192.966869396018,199.158971230675,170.06482644443,114.257457195302,116.273056718531,129.248193018489,133.200708572779,164.318349611775,184.616771136765,190.756610427965,242.522415227546,105.264379366039,159.036504844797,173.188232523245,210.512383760226,215.987350911738,203.138037603203,245.216627467681,196.952255753727,189.036224675076,229.872536856316,210.258199815087,192.965079276446,120.56083244839,115.266724382692,114.700927875177,316.94892620815,145.542086555689,124.410272673755,101.202962667679,125.334477658972,198.874270533211,158.261903463169,220.932231117397,75.3442492797621,73.1707011626461,77.4702809813372,242.114821057522,172.311671362372,123.842003889999,82.7595853819442,86.7166091750351,82.832809403253,66.0619029325797,81.2232773307782,63.5192327273556,50.0881266564097,79.1415827497634,82.6194393826074,105.71258513979,97.7433686369081,60.2508511848748,49.9497970022977,127.399462270479,160.450584471706,194.137955403509,99.9016706430685,143.691427980799,130.573200788271,85.6654977205874,98.0271756936929,67.7784937676165,68.4814586509818,72.2965704702929,52.1276567384003,74.9919871058822,57.1589441062871,915.87390118064,1085.78473961531,162.226987397023,153.067361122158,93.4533176084599,147.371418245113,345.064454760823,97.8884734867465,90.2690936229114,71.5218271389023,118.400423240237,183.614510885862,91.6032570073879,84.1828801034312,151.962857355511,131.94428670592,49.9104649805987,72.7332979014647,46.7786893666448,64.1134839567227,30.4155351487351,22.9859581002747,24.5788911728935,51.2426969849782,35.8676206550362,73.4646304159692,119.988288585487,131.793273305471,140.164849738456,112.104430123333,41.2423479187462,43.5412449154435,58.7375924826468,99.2089423190694,85.5100950279265,149.186392494251,93.6949832901774,108.71011922745,153.120647782913,115.92674993428,145.544181600935,93.4686440192641,124.95566192213,164.527300997125,158.480975974549,100.165241305712,81.0312415323608,117.179520971647,150.492478898314,226.141110433083,75.060313179592,64.7721462626063,133.543249535838,162.556687872137,135.945378214388,42.9347445576176,37.3733946666588,57.0512259489335,68.830940530206,68.8835922890466,33.9428943940522,82.9182521348025,123.502260133034,46.9658732598434,109.590831015547,112.613199140455,35.3737332119133,37.2572165072605,41.4538971399589,34.7426014107041,40.0898177130027,42.2341702017752,38.9662480582875,38.6556286296932,37.3204742237999,161.656044562798,65.9136336876195,88.0768384249196,80.8547912620481,109.009329946775,110.076648267894,134.70009872336,68.4267804092708,74.4080053185837,121.298441881058,108.543032269131,61.8209642916908,66.1480638468531,151.196930943879,38.119571721308,50.9568044786993,73.6089844328894,115.350752950201,219.789075609458,115.060058865576,117.135334681883,115.103762101932,57.6849210510271,57.5185728603565,347.412195589318,124.022260523796,190.099256567283,171.532916195802,147.992254943195,117.248005419454,70.5721158898445,76.436725829172,52.9068097247991,480.346656948545,342.684505179476,446.999417105905,426.450942160789,456.49263926979,91.3099719921391,77.5436503883304,77.363515158631,58.1646316477198,55.938156030608,94.608063220834,109.185697264881,63.5783248238195,82.8324130783232,57.277201226162,110.915132120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| |||
|short_description=p2@ITM2B | |||
}} |
Revision as of 17:42, 11 January 2014
Short description: | p2@ITM2B |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_2_at_ITM2B_5end |
Coexpression cluster: | C3376_Neutrophils_Eosinophils_chorionic_epididymis_clear_kidney_Whole |
Association with transcript: | -5bp_to_ENST00000378549_5end |
EntrezGene: | ITM2B |
HGNC: | 6174 |
UniProt: | Q5W0A2 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
myeloid leukocyte | 3.17e-17 | 72 |
defensive cell | 4.04e-14 | 48 |
phagocyte | 4.04e-14 | 48 |
myeloid lineage restricted progenitor cell | 2.30e-13 | 66 |
granulocyte monocyte progenitor cell | 4.29e-13 | 67 |
classical monocyte | 3.36e-12 | 42 |
CD14-positive, CD16-negative classical monocyte | 3.36e-12 | 42 |
monopoietic cell | 2.91e-11 | 59 |
monocyte | 2.91e-11 | 59 |
monoblast | 2.91e-11 | 59 |
promonocyte | 2.91e-11 | 59 |
macrophage dendritic cell progenitor | 7.31e-11 | 61 |
leukocyte | 6.06e-07 | 136 |
Ontology term | p-value | n |
---|---|---|
adult organism | 1.19e-35 | 114 |
hemolymphoid system | 3.35e-13 | 108 |
hematopoietic system | 1.69e-12 | 98 |
blood island | 1.69e-12 | 98 |
immune system | 8.48e-11 | 93 |
bone marrow | 9.53e-11 | 76 |
neural tube | 1.01e-09 | 56 |
neural rod | 1.01e-09 | 56 |
future spinal cord | 1.01e-09 | 56 |
neural keel | 1.01e-09 | 56 |
bone element | 4.05e-09 | 82 |
skeletal element | 4.29e-09 | 90 |
regional part of nervous system | 7.52e-09 | 53 |
regional part of brain | 7.52e-09 | 53 |
lateral plate mesoderm | 9.28e-09 | 203 |
skeletal system | 2.35e-08 | 100 |
neural plate | 1.85e-07 | 82 |
presumptive neural plate | 1.85e-07 | 82 |
regional part of forebrain | 7.60e-07 | 41 |
forebrain | 7.60e-07 | 41 |
anterior neural tube | 7.60e-07 | 41 |
future forebrain | 7.60e-07 | 41 |