FFCP PHASE1:Hg19::chr13:46275672..46275689,-: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |||
|TSSclassifier=not | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|coexpression_cluster_id=C826 | |||
|description=CAGE_peak_at_chr13:46275672..46275689,- | |||
|id=chr13:46275672..46275689,- | |||
|ontology_enrichment_celltype=CL:0000945!9.55e-20!24;CL:0000826!9.55e-20!24;CL:0000080!5.82e-16!6;CL:0000838!1.90e-14!52;CL:0000542!3.75e-14!53;CL:0000051!3.75e-14!53;CL:0000946!4.44e-11!1;CL:0000786!4.44e-11!1;CL:0000980!4.44e-11!1;CL:0000988!2.95e-07!182 | |||
|ontology_enrichment_celltype_v019=CL:0000945;1.23e-13;24!CL:0000542;1.37e-07;53 | |||
|ontology_enrichment_celltype_v019_2=CL:0000838,1.13e-13,52;CL:0000945,1.27e-13,24;CL:0000826,1.27e-13,24;CL:0000542,2.05e-13,53;CL:0000051,2.05e-13,53;CL:0000988,1.35e-08,177 | |||
|ontology_enrichment_development_v019=CL:0000051;1.37e-07;53 | |||
|ontology_enrichment_disease=DOID:630!1.97e-11!1;DOID:0050177!1.97e-11!1;DOID:0050427!1.97e-11!1;DOID:0060060!2.18e-11!1;DOID:0060061!2.18e-11!1;DOID:8691!2.18e-11!1;DOID:2355!4.91e-11!1;DOID:0060058!1.72e-09!10 | |||
|ontology_enrichment_disease_v019=DOID:630;7.71e-21;1!DOID:0050177;7.71e-21;1!DOID:0060060;7.71e-21;1!DOID:0060061;7.71e-21;1!DOID:0050427;7.71e-21;1!DOID:8691;7.71e-21;1 | |||
|ontology_enrichment_disease_v019_2=DOID:630,7.72e-21,1;DOID:0050177,7.72e-21,1;DOID:0050427,7.72e-21,1;DOID:0060060,9.43e-21,1;DOID:0060061,9.43e-21,1;DOID:8691,9.43e-21,1 | |||
|ontology_enrichment_uberon=UBERON:0002331!8.49e-10!10;UBERON:0000358!8.49e-10!10;UBERON:0000307!8.49e-10!10;UBERON:0000091!8.49e-10!10;UBERON:0000087!8.49e-10!10;UBERON:0007806!8.49e-10!10;UBERON:0008780!8.49e-10!10;UBERON:0005728!8.49e-10!10 | |||
|ontology_enrichment_uberon_v019=UBERON:0002331;1.78e-18;10!UBERON:0000178;1.49e-12;15!UBERON:0000179;1.49e-12;15!UBERON:0000463;1.49e-12;15!UBERON:0000478;4.47e-08;24 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002331,1.53e-18,10;UBERON:0000358,1.53e-18,10;UBERON:0000307,1.53e-18,10;UBERON:0000091,1.53e-18,10;UBERON:0000087,1.53e-18,10;UBERON:0007010,1.53e-18,10;UBERON:0007806,1.53e-18,10;UBERON:0008780,1.53e-18,10;UBERON:0005728,1.53e-18,10;UBERON:0000178,1.35e-12,15;UBERON:0000179,1.35e-12,15;UBERON:0000463,1.35e-12,15;UBERON:0000478,4.20e-08,24 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.2857764471619,2.62721886239826,3.14843125254717,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.392937226493138,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.369254416383208,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.55825354416746,2.47127877893006,1.8795950910982,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.41753560563109,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0846733320657845,0,0,0,0,0,0,0,0,0,0.315222829196793,0.0524545881349981,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.194860308839388,0,0,0,0,0,1.19992437512958,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.115233987555779,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.799529247399431,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.378893491091197,2.14371304124943,0,0,0,0,0,0.0620747142958579,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.60284246151616 | |||
|short_description=p@chr13:46275672..46275689,- | |||
}} |
Revision as of 17:36, 11 January 2014
Short description: | p@chr13:46275672..46275689, - |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | No |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr13:46275672..46275689, - |
Coexpression cluster: | C826_hairy_B_mycosis_cord_xeroderma_neuroblastoma_plasma |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
lymphoid lineage restricted progenitor cell | 1.13e-13 | 52 |
lymphocyte of B lineage | 1.27e-13 | 24 |
pro-B cell | 1.27e-13 | 24 |
lymphocyte | 2.05e-13 | 53 |
common lymphoid progenitor | 2.05e-13 | 53 |
hematopoietic cell | 1.35e-08 | 177 |
Ontology term | p-value | n |
---|---|---|
umbilical cord | 1.53e-18 | 10 |
blastocyst | 1.53e-18 | 10 |
blastula | 1.53e-18 | 10 |
bilaminar disc | 1.53e-18 | 10 |
inner cell mass | 1.53e-18 | 10 |
cleaving embryo | 1.53e-18 | 10 |
connecting stalk | 1.53e-18 | 10 |
inner cell mass derived epiblast | 1.53e-18 | 10 |
extraembryonic mesoderm | 1.53e-18 | 10 |
blood | 1.35e-12 | 15 |
haemolymphatic fluid | 1.35e-12 | 15 |
organism substance | 1.35e-12 | 15 |
extraembryonic structure | 4.20e-08 | 24 |
Ontology term | p-value | n |
---|---|---|
genetic disease | 7.72e-21 | 1 |
monogenic disease | 7.72e-21 | 1 |
xeroderma pigmentosum | 7.72e-21 | 1 |
non-Hodgkin lymphoma | 9.43e-21 | 1 |
cutaneous T cell lymphoma | 9.43e-21 | 1 |
mycosis fungoides | 9.43e-21 | 1 |