FFCP PHASE1:Hg19::chr13:45914647..45914657,-: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=7178 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=12022 | |||
|TSSclassifier=strong | |||
|UniProt= | |||
|association_with_transcript=-110bp_to_ENST00000529421_5end | |||
|coexpression_cluster_id=C17 | |||
|description=CAGE_peak_7_at_TPT1_5end | |||
|id=chr13:45914647..45914657,- | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019=CL:0000860;8.96e-19;33!CL:0002057;8.96e-19;33!CL:0000473;3.97e-13;39!CL:0000234;3.97e-13;39!CL:0000097;9.27e-12;5!CL:0000576;3.82e-08;48!CL:0000766;6.82e-08;69!CL:0000228;2.27e-07;1!CL:0002372;2.27e-07;1!CL:0000163;9.92e-07;9 | |||
|ontology_enrichment_celltype_v019_2=CL:0000766,1.07e-15,72;CL:0000860,1.57e-15,42;CL:0002057,1.57e-15,42;CL:0000839,5.13e-15,66;CL:0000557,9.38e-15,67;CL:0000473,2.46e-13,48;CL:0000234,2.46e-13,48;CL:0000763,1.10e-12,108;CL:0000049,1.10e-12,108;CL:0000097,1.08e-11,5;CL:0002028,1.08e-11,5;CL:0002194,2.89e-10,59;CL:0000576,2.89e-10,59;CL:0000040,2.89e-10,59;CL:0000559,2.89e-10,59;CL:0002009,7.19e-10,61;CL:0002032,1.67e-08,161;CL:0000837,1.67e-08,161;CL:0002031,2.69e-08,120;CL:0000738,4.18e-08,136;CL:0000037,5.29e-08,168;CL:0000228,1.95e-07,1;CL:0002372,1.95e-07,1;CL:0000988,2.04e-07,177 | |||
|ontology_enrichment_development_v019=CL:0002057;6.94e-13;42 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019=DOID:6193;7.24e-08;1 | |||
|ontology_enrichment_disease_v019_2=DOID:6193,7.03e-08,1 | |||
|ontology_enrichment_uberon= | |||
|ontology_enrichment_uberon_v019=UBERON:0002135;2.27e-07;1 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002371,1.06e-12,76;UBERON:0001474,1.39e-11,82;UBERON:0004765,2.55e-10,90;UBERON:0002405,6.66e-10,93;UBERON:0002390,2.90e-09,98;UBERON:0003061,2.90e-09,98;UBERON:0001434,5.01e-09,100;UBERON:0002193,3.65e-08,108;UBERON:0002204,5.84e-08,167;UBERON:0002135,3.84e-07,1 | |||
|phase1_expression=0,0.214100523890983,0,0,0,0,0,0,0,0,0,0,0.263766978228454,0.123766352960047,0,0.672325146451775,0,0,0,0,0,0,0.286235987131057,0,0,0.0764134057479513,0,0,0,0,0.309632246632152,0,0,0.369754010166788,0,0.142169232487422,0.293600439334847,0,0,0,0,0.32389366601898,0.257575567634187,0,0,0,0.232429036905685,0.822335776043652,0,1.1507695692886,1.0246428261164,1.18241114944293,2.41321976515633,3.87290810150296,0,0,0.272906150057846,1.12361742222542,0.918251677112708,0.962787081228281,1.91801137739712,0,1.19678194572979,0,0.580418477257168,0.56738522469114,0.622822248995575,2.00998932205395,0.521482918420201,1.52032191293582,0.605399502633369,1.47311054395026,0.316462387440884,0,0,0,0,0.150176892841506,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.205601498999509,0.167186495390678,0,0,0,0.334231370655521,0.294605907474837,0,0,0.768547918354051,0.130059347559878,0.328875809207352,0.276350017785848,0,0,0,0,0.226618685395132,0,0.34362744548263,0,0,0.651083453856419,0,0,0.255973222308837,0,0.236777252044017,0,0.403213486449465,0,0.144824403882799,0,0,0.12786256184353,0.361439152384566,0,0,0,0.973269740605272,0.283604451492204,0,0.087834785693126,0.0654895377488563,0.364295288292542,0.741568885568859,0.324547393654683,0.174129737299267,0.26591592103773,0,0,0,0.198762407366705,0,0,0,0,0,0,0,0,0,0,0,0,0,0.81014194788176,0,0,0,0,0,0,1.31780417436063,0,0,0,0.25326102332916,0,0.286836620748814,0.354668382198357,0,0,0,0,0.269421344139376,0,0.151357427644931,0,0,0.624320153660641,0,0,0.117434498643765,0,0,0,0,0.103325781175765,0,0.247266929278557,0,0,0,0,0,0,0,0,0.340296549480063,0,0,0.211931901159562,0,0.103052529238439,0,0.18611685633159,0.337552664482532,0,0,0,0.161646056818812,0,0.302256294682921,0,0.386521706326594,0.545492241181669,0.286804595389004,0,0.132529768321485,0,0.207322110030741,0.252320850875628,0,0,0,0,0,1.44375896333917,0.118306800039844,0,0,0.330881918197182,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.100528972411631,0.277765335475589,0,0,0,0.34779121492523,0.234817388471643,0.144366447761074,0,0.190254152234598,0,0,0.492434012174795,0.234004265139238,0,0,0.335964256397719,0.141775097242386,0.268675568108545,0.290633938513962,0,13.7945706610864,0.792435906119034,1.65862492432618,0.576479813667846,1.00993946741104,0.063497894292169,0,0,0,0.102827492703324,0.600686115687835,0,0,0,0.07333828582095,0.775630294546667,0,0,0.531876233169741,0,0.257207374262142,0,0.266422179016099,0,0,0,0,0,0.791951872933429,0,0,0.199945982364114,0,0,0,0,0,1.42636905040718,0.434343920002738,0.205476322550383,0,0,0,0,0.128343036279748,0,0,0,0.167516265334349,0,0,0,0,0,0.500170521059677,0,0,0,0,0.117141414992713,0.902838299183157,0,0,0,0,0.173767228936166,0.391602314925481,0,0,0.215714200818617,0,0,0,0.30239029332968,0.248107807818777,0,0,0,0,0.160853921143607,0,0.308419387605311,0.887808626565635,0.164254312027618,0,0.232420756919918,0,0,0.184161977871793,0.574072240823034,0,0.393373244878272,0,0.231046011313244,0,0,0.211103257785751,0,0,0,0,0,0.501689773854853,0,0,0,0,0,0,0,0,1.95777922130672,0,0,0,0,0,0.290012154876366,0.308097234229289,0,0.275673144969061,0.322260734604821,0.145016693914229,0.255679882248303,0.0890320356467374,0.495854746082934,0.576570202095319,0.127612712494584,0,0.464845549297286,0,1.3940745403212,0.308033580176089,1.06461206063404,0,0.55597265731176,0.429374660225974,0.372158369359667,0.316379424718726,0,0,0,0.318203247925937,0,0.179872457583315,0.274537029736055,0,0.202182481573316,0,0,0,0,1.05650146756755,0,0.282810863907425,0,0,0.66343897524122,0,0.578775534266688,0,0.202910376962704,0,0,0.286822704408103,0.196498082026242,0,0.354761064070598,0,0,0.379473173765715,0,0.288666338176536,0,2.17781969722645,1.88287601553558,0,0,0.443430153536676,0.459446800413919,0,0,0,0,0,0,0.540031437238115,0,0.106824071127473,0,0,0.371606350251437,0,0,0.318852545457645,0.399158742865633,0.5745161103971,2.32840940996271,0.324621940274555,0.561594356226918,0,0,0,0,0.321176150207399,0,0.425846237690326,0,0,0,0,0.19538809540204,0.278406173895242,0,0,0,0,0,0,0,0,0.284136146806413,0.47748896947538,0,0.921482106297696,0.994147647766298,0.562677665642051,0.333926115068718,1.48323486804084,0,0.19924798825107,0,0,0.20453736500431,0.123084805461069,0,0.179736702294654,0,0.511572370226872,0.0986434056369336,0,0,0,0,0,0,0.0874599999961957,0,0.1137934482855,0,0,0,0.291604613383254,0,0,0.844175070377856,0,0,0,0.438770794307945,0.10893846351899,0.278847488557207,0.230850775511391,0,0.23056390438806,0.0897576444097721,0,0.31900115973192,0,0.533034776018635,0,1.72678282034527,0.166211681900156,0.451191321234361,0.19606253431774,0.335643173951685,0.189753732724185,0,0.210998064528027,0,0,0,0,0,0,0.889563386041866,0.86494757262552,0.522109747527277,0,0,0.702793337176017,0,0,0,0,0,0,0,0,0,0,0.330991955875499,0.313932918407225,0,0.284609546029793,0.970722711091971,0.173559738335131,0,0.0870592065804026,0.34945333648406,3.95567874684718,0.19351266257817,0.0730893170861856,0.164230914106418,0.193978032976839,0.0882561266915003,0,0.137041924646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| |||
|short_description=p7@TPT1 | |||
}} |
Revision as of 17:35, 11 January 2014
Short description: | p7@TPT1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_7_at_TPT1_5end |
Coexpression cluster: | C17_Mast_CD14_Monocytederived_Lymphatic_Smooth_mesenchymal_Macrophage |
Association with transcript: | -110bp_to_ENST00000529421_5end |
EntrezGene: | TPT1 |
HGNC: | 12022 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
myeloid leukocyte | 1.07e-15 | 72 |
classical monocyte | 1.57e-15 | 42 |
CD14-positive, CD16-negative classical monocyte | 1.57e-15 | 42 |
myeloid lineage restricted progenitor cell | 5.13e-15 | 66 |
granulocyte monocyte progenitor cell | 9.38e-15 | 67 |
defensive cell | 2.46e-13 | 48 |
phagocyte | 2.46e-13 | 48 |
myeloid cell | 1.10e-12 | 108 |
common myeloid progenitor | 1.10e-12 | 108 |
mast cell | 1.08e-11 | 5 |
basophil mast progenitor cell | 1.08e-11 | 5 |
monopoietic cell | 2.89e-10 | 59 |
monocyte | 2.89e-10 | 59 |
monoblast | 2.89e-10 | 59 |
promonocyte | 2.89e-10 | 59 |
macrophage dendritic cell progenitor | 7.19e-10 | 61 |
hematopoietic oligopotent progenitor cell | 1.67e-08 | 161 |
hematopoietic multipotent progenitor cell | 1.67e-08 | 161 |
hematopoietic lineage restricted progenitor cell | 2.69e-08 | 120 |
leukocyte | 4.18e-08 | 136 |
hematopoietic stem cell | 5.29e-08 | 168 |
multinucleate cell | 1.95e-07 | 1 |
myotube | 1.95e-07 | 1 |
hematopoietic cell | 2.04e-07 | 177 |
Ontology term | p-value | n |
---|---|---|
bone marrow | 1.06e-12 | 76 |
bone element | 1.39e-11 | 82 |
skeletal element | 2.55e-10 | 90 |
immune system | 6.66e-10 | 93 |
hematopoietic system | 2.90e-09 | 98 |
blood island | 2.90e-09 | 98 |
skeletal system | 5.01e-09 | 100 |
hemolymphoid system | 3.65e-08 | 108 |
musculoskeletal system | 5.84e-08 | 167 |
mitral valve | 3.84e-07 | 1 |
Ontology term | p-value | n |
---|---|---|
epithelioid sarcoma | 7.03e-08 | 1 |