FFCP PHASE1:Hg19::chr12:95611149..95611249,-: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=55785 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=21740 | |||
|TSSclassifier=strong | |||
|UniProt=Q6ZV73,F8VY01 | |||
|association_with_transcript=0bp_to_ENST00000343958,ENST00000546711,ENST00000549499,NM_018351,uc001tdp.3,uc009zsx.2_5end | |||
|description=CAGE_peak_1_at_FGD6_5end | |||
|id=chr12:95611149..95611249,- | |||
|ontology_enrichment_celltype=CL:0000066!4.78e-15!254;CL:0000076!1.75e-08!62 | |||
|ontology_enrichment_celltype_v019= | |||
|ontology_enrichment_celltype_v019_2=CL:0000066,4.88e-15,253;CL:0000076,3.34e-08,63 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease=DOID:305!1.58e-07!106 | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2=DOID:305,2.30e-07,106 | |||
|ontology_enrichment_uberon=UBERON:0000468!4.69e-20!659;UBERON:0000922!2.72e-18!612;UBERON:0000480!2.01e-17!626;UBERON:0000467!2.61e-17!625;UBERON:0000062!2.69e-17!511;UBERON:0002050!5.96e-16!605;UBERON:0005423!5.96e-16!605;UBERON:0000923!1.04e-15!604;UBERON:0005291!1.04e-15!604;UBERON:0006598!1.04e-15!604;UBERON:0002532!1.04e-15!604;UBERON:0004111!4.46e-11!241;UBERON:0007023!1.29e-10!115;UBERON:0004119!4.73e-10!169;UBERON:0000925!4.73e-10!169;UBERON:0006595!4.73e-10!169;UBERON:0000477!7.08e-10!286;UBERON:0000119!8.11e-09!312;UBERON:0000483!9.80e-09!309;UBERON:0000481!2.34e-08!347;UBERON:0004921!3.75e-08!129;UBERON:0004185!3.75e-08!129;UBERON:0001007!6.03e-08!155;UBERON:0001555!6.03e-08!155;UBERON:0007026!6.03e-08!155;UBERON:0005911!1.09e-07!82;UBERON:0005153!1.87e-07!37;UBERON:0005157!2.38e-07!51;UBERON:0000025!2.72e-07!194 | |||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000922,2.10e-16,592;UBERON:0005423,3.93e-14,581;UBERON:0002050,2.05e-12,564;UBERON:0000923,1.66e-11,560;UBERON:0010316,1.66e-11,560;UBERON:0005291,1.66e-11,560;UBERON:0006598,1.66e-11,560;UBERON:0010317,1.66e-11,560;UBERON:0002532,1.66e-11,560;UBERON:0011216,2.22e-11,223;UBERON:0004111,4.23e-11,240;UBERON:0007023,2.09e-10,114;UBERON:0004119,2.24e-09,160;UBERON:0000925,2.24e-09,160;UBERON:0006595,2.24e-09,160;UBERON:0004921,4.60e-08,118;UBERON:0005911,7.49e-08,82;UBERON:0001007,1.58e-07,145;UBERON:0001555,1.58e-07,145;UBERON:0007026,1.58e-07,145;UBERON:0000025,1.76e-07,192;UBERON:0005153,1.78e-07,37;UBERON:0000119,1.92e-07,309;UBERON:0000483,2.30e-07,306 | |||
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| |||
|short_description=p1@FGD6 | |||
}} |
Revision as of 15:17, 11 January 2014
Short description: | p1@FGD6 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_FGD6_5end |
Coexpression cluster: | NA |
Association with transcript: | 0bp_to_ENST00000343958, ENST00000546711, ENST00000549499, NM_018351, uc001tdp.3, uc009zsx.2_5end |
EntrezGene: | FGD6 |
HGNC: | 21740 |
UniProt: | Q6ZV73F8VY01 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
epithelial cell | 4.88e-15 | 253 |
squamous epithelial cell | 3.34e-08 | 63 |
Ontology term | p-value | n |
---|---|---|
embryo | 2.10e-16 | 592 |
developing anatomical structure | 3.93e-14 | 581 |
embryonic structure | 2.05e-12 | 564 |
germ layer | 1.66e-11 | 560 |
germ layer / neural crest | 1.66e-11 | 560 |
embryonic tissue | 1.66e-11 | 560 |
presumptive structure | 1.66e-11 | 560 |
germ layer / neural crest derived structure | 1.66e-11 | 560 |
epiblast (generic) | 1.66e-11 | 560 |
organ system subdivision | 2.22e-11 | 223 |
anatomical conduit | 4.23e-11 | 240 |
adult organism | 2.09e-10 | 114 |
endoderm-derived structure | 2.24e-09 | 160 |
endoderm | 2.24e-09 | 160 |
presumptive endoderm | 2.24e-09 | 160 |
subdivision of digestive tract | 4.60e-08 | 118 |
endo-epithelium | 7.49e-08 | 82 |
digestive system | 1.58e-07 | 145 |
digestive tract | 1.58e-07 | 145 |
primitive gut | 1.58e-07 | 145 |
tube | 1.76e-07 | 192 |
epithelial bud | 1.78e-07 | 37 |
cell layer | 1.92e-07 | 309 |
epithelium | 2.30e-07 | 306 |
Ontology term | p-value | n |
---|---|---|
carcinoma | 2.30e-07 | 106 |