FFCP PHASE1:Hg19::chr12:92401866..92401875,+: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
Line 1: | Line 1: | ||
{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |||
|TSSclassifier=not | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|coexpression_cluster_id=C94 | |||
|description=CAGE_peak_at_chr12:92401866..92401875,+ | |||
|id=chr12:92401866..92401875,+ | |||
|ontology_enrichment_celltype=CL:0000167!2.78e-26!1;CL:0000164!2.78e-26!1;CL:0000502!2.78e-26!1;CL:0000172!2.78e-26!1;CL:0000173!2.78e-26!1;CL:0002351!2.78e-26!1;CL:0000342!1.26e-25!1;CL:0002565!1.26e-25!1 | |||
|ontology_enrichment_celltype_v019=CL:0000167;1.21e-40;1!CL:0000164;1.21e-40;1!CL:0000502;1.21e-40;1!CL:0000172;1.21e-40;1!CL:0000173;1.21e-40;1 | |||
|ontology_enrichment_celltype_v019_2=CL:0000167,9.91e-41,1;CL:0000164,9.91e-41,1;CL:0000502,9.91e-41,1;CL:0000172,9.91e-41,1;CL:0000173,9.91e-41,1;CL:0002351,9.91e-41,1 | |||
|ontology_enrichment_development_v019=CL:0002351;1.21e-40;1!UBERON:0006215;1.96e-14;3 | |||
|ontology_enrichment_disease=DOID:4430!2.78e-26!1;DOID:0050619!4.61e-26!1;DOID:1357!4.61e-26!1;DOID:5409!1.49e-07!4;DOID:0050615!3.44e-07!16 | |||
|ontology_enrichment_disease_v019=DOID:4430;1.21e-40;1!DOID:0050619;2.70e-40;1!DOID:1357;2.70e-40;1!DOID:5409;2.94e-11;4!DOID:0050615;6.45e-11;16!DOID:169;6.13e-08;6!DOID:1325;5.54e-07;7!DOID:3904;5.54e-07;7 | |||
|ontology_enrichment_disease_v019_2=DOID:4430,9.91e-41,1;DOID:0050619,2.21e-40,1;DOID:1357,2.21e-40,1;DOID:5409,3.10e-11,4;DOID:0050615,6.45e-11,16;DOID:169,5.92e-08,6;DOID:1325,5.70e-07,7;DOID:3904,5.70e-07,7 | |||
|ontology_enrichment_uberon=UBERON:0001764!4.61e-26!1;UBERON:0001825!4.61e-26!1;UBERON:0002506!1.26e-25!1;UBERON:0001769!1.26e-25!1;UBERON:0000007!1.37e-13!2;UBERON:0003296!1.92e-07!4;UBERON:0010133!1.92e-07!4;UBERON:0000488!2.04e-07!4 | |||
|ontology_enrichment_uberon_v019=UBERON:0001764;2.70e-40;1!UBERON:0001825;2.70e-40;1!UBERON:0002037;7.01e-08;6 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001764,2.21e-40,1;UBERON:0001825,2.21e-40,1;UBERON:0002037,7.25e-08,6;UBERON:0006215,7.25e-08,6 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.171567810298526,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.52581736317083,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.5085370753095,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.57054096250234,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.227662191351298,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.41540549706678,0,0,7.52507674178437,0,2.59244201811789,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0 | |||
|short_description=p@chr12:92401866..92401875,+ | |||
}} |
Revision as of 15:09, 11 January 2014
Short description: | p@chr12:92401866..92401875, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | No |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr12:92401866..92401875, + |
Coexpression cluster: | C94_smallcell_adrenal_lung_nonsmall_small_somatostatinoma_teratocarcinoma |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
peptide hormone secreting cell | 9.91e-41 | 1 |
enteroendocrine cell | 9.91e-41 | 1 |
type D enteroendocrine cell | 9.91e-41 | 1 |
somatostatin secreting cell | 9.91e-41 | 1 |
pancreatic D cell | 9.91e-41 | 1 |
progenitor cell of endocrine pancreas | 9.91e-41 | 1 |
Ontology term | p-value | n |
---|---|---|
maxillary sinus | 2.21e-40 | 1 |
paranasal sinus | 2.21e-40 | 1 |
cerebellum | 7.25e-08 | 6 |
rhombic lip | 7.25e-08 | 6 |
Ontology term | p-value | n |
---|---|---|
somatostatinoma | 9.91e-41 | 1 |
paranasal sinus cancer | 2.21e-40 | 1 |
maxillary sinus cancer | 2.21e-40 | 1 |
lung small cell carcinoma | 3.10e-11 | 4 |
respiratory system cancer | 6.45e-11 | 16 |
neuroendocrine tumor | 5.92e-08 | 6 |
bronchus cancer | 5.70e-07 | 7 |
bronchogenic carcinoma | 5.70e-07 | 7 |