FFCP PHASE1:Hg19::chr12:89746024..89746048,-: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=1848 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=3072 | |||
|TSSclassifier=strong | |||
|UniProt= | |||
|association_with_transcript=133bp_to_ENST00000308385_5end | |||
|coexpression_cluster_id=C3341 | |||
|description=CAGE_peak_3_at_DUSP6_5end | |||
|id=chr12:89746024..89746048,- | |||
|ontology_enrichment_celltype=CL:0002057!2.28e-27!42;CL:0000860!5.55e-23!45;CL:0000766!1.31e-22!76;CL:0000557!2.23e-18!71;CL:0002194!6.16e-18!63;CL:0000576!6.16e-18!63;CL:0000040!6.16e-18!63;CL:0000559!6.16e-18!63;CL:0000839!1.40e-17!70;CL:0002009!4.51e-17!65;CL:0000763!2.52e-10!112;CL:0000049!2.52e-10!112;CL:0000034!1.56e-08!444;CL:0000048!2.12e-08!430;CL:0000723!2.79e-08!436;CL:0000359!2.22e-07!32;CL:0002393!6.09e-07!9;CL:0002397!6.09e-07!9;CL:0002371!7.81e-07!591 | |||
|ontology_enrichment_celltype_v019=CL:0000860;6.73e-23;33!CL:0002057;6.73e-23;33!CL:0000473;5.46e-19;39!CL:0000234;5.46e-19;39!CL:0000576;8.60e-16;48!CL:0000766;1.91e-14;69!CL:0000359;2.17e-07;32 | |||
|ontology_enrichment_celltype_v019_2=CL:0000860,1.79e-31,42;CL:0002057,1.79e-31,42;CL:0000473,3.69e-31,48;CL:0000234,3.69e-31,48;CL:0000766,2.87e-28,72;CL:0002194,2.81e-23,59;CL:0000576,2.81e-23,59;CL:0000040,2.81e-23,59;CL:0000559,2.81e-23,59;CL:0000839,8.99e-23,66;CL:0000557,1.14e-22,67;CL:0002009,1.17e-21,61;CL:0000763,9.23e-14,108;CL:0000049,9.23e-14,108;CL:0000034,2.43e-10,441;CL:0000048,2.62e-10,427;CL:0000723,3.29e-10,433;CL:0000738,3.75e-10,136;CL:0002087,3.83e-08,115;CL:0002393,8.47e-08,9;CL:0002397,8.47e-08,9;CL:0002031,8.85e-08,120;CL:0000359,1.07e-07,32 | |||
|ontology_enrichment_development_v019=CL:0002057;9.17e-23;42 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019=DOID:2394;1.69e-07;14 | |||
|ontology_enrichment_disease_v019_2=DOID:2394,1.84e-07,14 | |||
|ontology_enrichment_uberon=UBERON:0002371!1.58e-16!80;UBERON:0002204!1.80e-16!167;UBERON:0002193!3.87e-16!112;UBERON:0002390!1.07e-15!102;UBERON:0003061!1.07e-15!102;UBERON:0004765!1.80e-15!101;UBERON:0001434!1.80e-15!101;UBERON:0001474!2.72e-15!86;UBERON:0002405!3.73e-15!115;UBERON:0003081!2.38e-14!216;UBERON:0001637!4.49e-09!42;UBERON:0003509!4.49e-09!42;UBERON:0004572!4.49e-09!42;UBERON:0004535!1.13e-08!110;UBERON:0000926!2.89e-08!448;UBERON:0004120!2.89e-08!448;UBERON:0006603!2.89e-08!448;UBERON:0000467!6.93e-08!625;UBERON:0000480!8.32e-08!626;UBERON:0000055!8.65e-08!69;UBERON:0001009!1.16e-07!113;UBERON:0001981!1.21e-07!60;UBERON:0007500!1.21e-07!60;UBERON:0004537!1.21e-07!60;UBERON:0006965!1.21e-07!60;UBERON:0004573!1.94e-07!33;UBERON:0004571!1.94e-07!33;UBERON:0002049!2.50e-07!79;UBERON:0007798!2.50e-07!79;UBERON:0000923!4.56e-07!604;UBERON:0005291!4.56e-07!604;UBERON:0006598!4.56e-07!604;UBERON:0002532!4.56e-07!604;UBERON:0002050!7.32e-07!605;UBERON:0005423!7.32e-07!605;UBERON:0000922!8.63e-07!612 | |||
|ontology_enrichment_uberon_v019=UBERON:0004573;7.09e-07;33!UBERON:0004571;7.09e-07;33 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002371,1.22e-20,76;UBERON:0002390,5.54e-20,98;UBERON:0003061,5.54e-20,98;UBERON:0001474,8.30e-20,82;UBERON:0002193,9.23e-20,108;UBERON:0003081,2.14e-19,203;UBERON:0004765,2.22e-19,90;UBERON:0002405,2.27e-18,93;UBERON:0002204,1.30e-17,167;UBERON:0001434,2.47e-17,100;UBERON:0000926,1.06e-13,315;UBERON:0004120,1.06e-13,315;UBERON:0006603,1.06e-13,315;UBERON:0001637,2.10e-09,42;UBERON:0003509,2.10e-09,42;UBERON:0004572,2.10e-09,42;UBERON:0002050,3.41e-08,564;UBERON:0004535,4.39e-08,109;UBERON:0000923,1.07e-07,560;UBERON:0010316,1.07e-07,560;UBERON:0005291,1.07e-07,560;UBERON:0006598,1.07e-07,560;UBERON:0010317,1.07e-07,560;UBERON:0002532,1.07e-07,560;UBERON:0004573,1.61e-07,33;UBERON:0004571,1.61e-07,33;UBERON:0001009,2.58e-07,112;UBERON:0007500,6.14e-07,59;UBERON:0001981,6.14e-07,59;UBERON:0004537,6.14e-07,59;UBERON:0006965,6.14e-07,59 | |||
|phase1_expression=0.726713517082227,5.35251309727458,0.845726424575827,1.0007329835313,0.893922188854576,0,7.59899634504932,13.2661173419635,23.2455209097856,1.22866968250754,2.79120467188971,0,0.263766978228454,1.11389717664042,3.97676850873499,10.7572023432284,5.42425075221579,7.30310090387373,8.29485757943862,0,0,0,0,0.136874425072884,0.251085279189606,0,0,0,37.3696063006459,14.9693465257913,10.3726802621771,3.67768489791571,2.10844143144775,1.47901604066715,0,0,1.17440175733939,26.0377842009982,24.065333696417,23.2201631665961,0.895661896959697,0.32389366601898,0,21.8097358169347,21.1610528465733,30.323007648477,17.664606804832,18.913722849004,15.7950249156503,80.8415622425243,54.5622304906984,71.1811511964642,82.7389633767884,41.3110197493649,27.0852973188684,14.6829024843232,7.91427835167753,14.3823030044854,59.9924429046969,46.5347089260336,55.6223299445166,48.4881411274473,65.8230070151385,62.655038328306,57.171220009831,52.1994406715849,50.4486021686416,60.5509283268751,47.9764284946585,44.0893354751387,32.6915731422019,65.5534192057865,63.2924774881769,39.927249112957,26.7881417955955,33.5453832813401,15.8383369916558,16.6696351054072,22.6623077242883,18.8108410869224,30.2353349342617,29.9569212174,0,2.18455444504853,1.77901850772711,0,0,0,0,1.90810750907073,3.98449078376614,4.11066032559657,2.29363936875137,2.64342657158052,2.24203425192614,2.89722493252585,0.983548850569165,1.57204305099666,1.02800749499755,0.668745981562712,0,0.473447805734733,0,5.79334375802903,0.589211814949674,0.886135578334485,0.541607727530031,3.97083091149593,5.46249259751489,1.97325485524411,3.31620021343018,1.15921234294021,0,0,0,0.566546713487831,0.383220493601921,0,0.253019692019503,0.637130828648193,0,0,0.301150238155546,0.76791966692651,1.24930726552346,0.947109008176067,0,0.604820229674197,1.60464117470104,1.15859523106239,2.43806866313962,6.03630773733273,0.12786256184353,1.80719576192283,0.50133791063589,0.289693037921647,7.95285947051099,1.94653948121054,0.472674085820339,1.77383517970051,1.14185221401064,0.851363990735132,0.364295288292542,0,0.324547393654683,0.348259474598534,1.06366368415092,9.53962497221368,1.14398982156026,8.17206502925043,0.993812036833525,0.860234595106124,1.04142150482278,5.6530794192401,4.61449379830897,3.02629846134074,1.67195973229448,1.8089173141853,6.40379272836078,1.33888245105868,1.61131726843659,6.84244895146661,0.732186172644509,1.47065232138347,9.72170337458112,0.803697554556718,0.22452937262617,0.563057402416611,1.53316637465883,2.84779697870439,3.29763139074733,3.9534125230819,3.87780264148325,0.436094052142534,0.496971951695318,0.633152558322899,14.5650098894541,0.286836620748814,0,0,1.06748995729705,1.48000529050296,4.66816553099649,1.88594940897563,1.63461903113459,2.8757911252537,1.15235184896,0.234321431833797,12.4864030732128,2.85235910772225,7.77133138869366,0.23486899728753,0.323745888736263,0.421352420106746,2.85815839756851,0,0.723280468230358,1.18800285728205,0,1.82032272387605,0.718618141816238,0.336672227908132,0.250237039743928,3.04770527032601,0.438977620880838,0.612975591598039,0.45071417671979,1.81491493056034,0.358779271377724,0.640672166455702,1.48352330811693,3.00091096084402,0.92747276314595,1.28820270022815,0.744467425326359,1.35021065793013,0.487185025805993,1.00973509697646,0.184099797284599,0.646584227275248,0.710019185033229,0,0.169560592310488,8.31021668602176,5.18217629122586,8.60413786167011,0.609868530647977,0.132529768321485,1.04574548582567,2.798848485415,0.504641701751257,0,0,0,4.14404764057442,0.464367928031979,0.721879481669586,0,0,0,0,0,0,0,0,0,8.11971000087113,2.80483547606892,1.6462960453256,1.47008711385542,2.53510069643662,0.982827216677626,0,0,0.122988438543114,3.25978839567199,8.34102169105554,1.1240175325762,0.904760751704678,1.574003567695,0,3.11980435583874,0,1.27523445472584,2.46558257895225,0.866198686566443,3.24089858803628,1.14152491340759,0,0,1.72351904261178,2.34004265139238,1.48631162288728,6.56136837907439,5.03946384596579,5.52922879245307,7.25424033893071,5.81267877027924,4.60059214998253,17.243213326358,0.880484340132261,6.21984346622316,8.64719720501769,5.0496973370552,0.507983154337352,1.14596527667483,0,5.13217338068116,0.616964956219941,3.60411669412701,3.14409075893636,0.224262168690721,0.43596006883328,0.4400297149257,6.85140093516222,0,0.845302752556,0.26593811658487,2.08014873822732,0.257207374262142,0,0.799266537048298,2.28764789853036,0,0,0.325736184293735,1.06617584622764,0,21.4021957712306,24.4029368408082,12.9964888536674,1.2162378064119,3.51579964002488,6.32501818449095,0.239624855491583,0,2.85273810081437,2.02693829334611,3.90405012845728,1.25342674267927,7.50970464756633,3.15249216323084,1.07813787429759,1.66845947163673,28.2045032886934,3.90419561572865,0,1.34013012267479,0,6.74106321552464,11.966458368161,6.21623270154053,0.12269149171914,0.500170521059677,0.542530047399471,0.207970861530807,0.178428988797162,0.473107245101804,0.468565659970853,5.71797589482666,4.5481500811197,3.10419213877515,0,0.73747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| |||
|short_description=p3@DUSP6 | |||
}} |
Revision as of 15:03, 11 January 2014
Short description: | p3@DUSP6 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_3_at_DUSP6_5end |
Coexpression cluster: | C3341_extraskeletal_CD14_adrenal_gastric_Basophils_Mesothelial_Mast |
Association with transcript: | 133bp_to_ENST00000308385_5end |
EntrezGene: | DUSP6 |
HGNC: | 3072 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
classical monocyte | 1.79e-31 | 42 |
CD14-positive, CD16-negative classical monocyte | 1.79e-31 | 42 |
defensive cell | 3.69e-31 | 48 |
phagocyte | 3.69e-31 | 48 |
myeloid leukocyte | 2.87e-28 | 72 |
monopoietic cell | 2.81e-23 | 59 |
monocyte | 2.81e-23 | 59 |
monoblast | 2.81e-23 | 59 |
promonocyte | 2.81e-23 | 59 |
myeloid lineage restricted progenitor cell | 8.99e-23 | 66 |
granulocyte monocyte progenitor cell | 1.14e-22 | 67 |
macrophage dendritic cell progenitor | 1.17e-21 | 61 |
myeloid cell | 9.23e-14 | 108 |
common myeloid progenitor | 9.23e-14 | 108 |
stem cell | 2.43e-10 | 441 |
multi fate stem cell | 2.62e-10 | 427 |
somatic stem cell | 3.29e-10 | 433 |
leukocyte | 3.75e-10 | 136 |
nongranular leukocyte | 3.83e-08 | 115 |
intermediate monocyte | 8.47e-08 | 9 |
CD14-positive, CD16-positive monocyte | 8.47e-08 | 9 |
hematopoietic lineage restricted progenitor cell | 8.85e-08 | 120 |
vascular associated smooth muscle cell | 1.07e-07 | 32 |
Ontology term | p-value | n |
---|---|---|
bone marrow | 1.22e-20 | 76 |
hematopoietic system | 5.54e-20 | 98 |
blood island | 5.54e-20 | 98 |
bone element | 8.30e-20 | 82 |
hemolymphoid system | 9.23e-20 | 108 |
lateral plate mesoderm | 2.14e-19 | 203 |
skeletal element | 2.22e-19 | 90 |
immune system | 2.27e-18 | 93 |
musculoskeletal system | 1.30e-17 | 167 |
skeletal system | 2.47e-17 | 100 |
mesoderm | 1.06e-13 | 315 |
mesoderm-derived structure | 1.06e-13 | 315 |
presumptive mesoderm | 1.06e-13 | 315 |
artery | 2.10e-09 | 42 |
arterial blood vessel | 2.10e-09 | 42 |
arterial system | 2.10e-09 | 42 |
embryonic structure | 3.41e-08 | 564 |
cardiovascular system | 4.39e-08 | 109 |
germ layer | 1.07e-07 | 560 |
germ layer / neural crest | 1.07e-07 | 560 |
embryonic tissue | 1.07e-07 | 560 |
presumptive structure | 1.07e-07 | 560 |
germ layer / neural crest derived structure | 1.07e-07 | 560 |
epiblast (generic) | 1.07e-07 | 560 |
systemic artery | 1.61e-07 | 33 |
systemic arterial system | 1.61e-07 | 33 |
circulatory system | 2.58e-07 | 112 |
epithelial tube open at both ends | 6.14e-07 | 59 |
blood vessel | 6.14e-07 | 59 |
blood vasculature | 6.14e-07 | 59 |
vascular cord | 6.14e-07 | 59 |
Ontology term | p-value | n |
---|---|---|
ovarian cancer | 1.84e-07 | 14 |