FFCP PHASE1:Hg19::chr12:88782727..88782732,-: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport= | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |||
|TSSclassifier=not | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|coexpression_cluster_id=C91 | |||
|description=CAGE_peak_at_chr12:88782727..88782732,- | |||
|id=chr12:88782727..88782732,- | |||
|ontology_enrichment_celltype=CL:0000946!2.41e-14!1;CL:0000786!2.41e-14!1;CL:0000980!2.41e-14!1;CL:0002574!2.75e-14!1;CL:0002595!8.78e-12!5;CL:0002593!4.09e-08!2;CL:0000785!8.04e-08!2;CL:0000955!8.04e-08!2;CL:0000818!8.04e-08!2;CL:0000954!8.04e-08!2;CL:0000816!8.04e-08!2;CL:0000359!5.07e-07!32 | |||
|ontology_enrichment_celltype_v019=CL:0002593;5.96e-34;2!CL:1000306;7.35e-18;4!CL:0002547;7.35e-18;4!CL:0002595;1.71e-14;5!CL:0000359;6.52e-10;32!CL:0002539;6.34e-08;10 | |||
|ontology_enrichment_celltype_v019_2=CL:0002593,7.05e-34,2;CL:1000306,7.35e-18,4;CL:0002547,7.35e-18,4;CL:0002595,1.83e-14,5;CL:0000359,2.31e-09,32;CL:0002539,6.13e-08,10;CL:0000192,3.05e-07,43;CL:0000514,3.05e-07,43 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease=DOID:17!1.58e-11!5;DOID:450!1.58e-11!5;DOID:66!1.58e-11!5;DOID:423!1.58e-11!5;DOID:0080000!1.58e-11!5;DOID:11722!1.58e-11!5 | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0003834!8.78e-12!5;UBERON:0001533!8.78e-12!5;UBERON:0004573!2.97e-10!33;UBERON:0004571!2.97e-10!33;UBERON:0002456!4.09e-08!2;UBERON:0001637!4.87e-08!42;UBERON:0003509!4.87e-08!42;UBERON:0004572!4.87e-08!42;UBERON:0003513!1.07e-07!8 | |||
|ontology_enrichment_uberon_v019=UBERON:0002456;5.96e-34;2!UBERON:0004573;1.08e-19;33!UBERON:0004571;1.08e-19;33!UBERON:0004797;7.35e-18;4!UBERON:0000415;7.35e-18;4!UBERON:0007240;7.35e-18;4!UBERON:0005742;7.35e-18;4!UBERON:0005734;7.35e-18;4!UBERON:0004664;7.35e-18;4!UBERON:0004663;7.35e-18;4!UBERON:0003834;1.71e-14;5!UBERON:0001533;1.71e-14;5!UBERON:0000947;1.05e-13;21!UBERON:0010191;1.05e-13;21!UBERON:0001637;6.93e-12;42!UBERON:0003509;6.93e-12;42!UBERON:0004572;6.93e-12;42!UBERON:0003513;9.43e-11;7!UBERON:0000055;5.35e-09;65!UBERON:0004237;6.34e-08;10!UBERON:0004695;6.34e-08;10!UBERON:0002111;6.34e-08;10!UBERON:0004178;6.34e-08;10!UBERON:0007500;7.28e-07;56!UBERON:0001981;7.28e-07;56!UBERON:0004537;7.28e-07;56 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002456,7.05e-34,2;UBERON:0004573,5.33e-19,33;UBERON:0004571,5.33e-19,33;UBERON:0000415,7.35e-18,4;UBERON:0007240,7.35e-18,4;UBERON:0005742,7.35e-18,4;UBERON:0005734,7.35e-18,4;UBERON:0004664,7.35e-18,4;UBERON:0004663,7.35e-18,4;UBERON:0001637,3.52e-15,42;UBERON:0003509,3.52e-15,42;UBERON:0004572,3.52e-15,42;UBERON:0003834,1.83e-14,5;UBERON:0001533,1.83e-14,5;UBERON:0000947,1.02e-13,21;UBERON:0010191,1.02e-13,21;UBERON:0007500,3.99e-11,59;UBERON:0001981,3.99e-11,59;UBERON:0004537,3.99e-11,59;UBERON:0006965,3.99e-11,59;UBERON:0004797,8.16e-11,7;UBERON:0003513,9.89e-11,7;UBERON:0000055,8.58e-10,68;UBERON:0002049,1.14e-08,78;UBERON:0007798,1.14e-08,78;UBERON:0004872,3.31e-08,83;UBERON:0004237,6.13e-08,10;UBERON:0004695,6.13e-08,10;UBERON:0002111,6.13e-08,10;UBERON:0004178,6.13e-08,10 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.14828656316206,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.1185468930115,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.211931901159562,0.300091096084402,0,0,0,0,0,0,0,0,0.355009592516614,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0868836144680828,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0821271560138091,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.464845549297286,1.25924938732256,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.21856744815642,0,0,0,0,0,0,0.438450885253763,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.222617410045812,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.340776043570843,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.295710299979268,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.115233987555779,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0 | |||
|short_description=p@chr12:88782727..88782732,- | |||
}} |
Revision as of 15:01, 11 January 2014
Short description: | p@chr12:88782727..88782732, - |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | No |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr12:88782727..88782732, - |
Coexpression cluster: | C91_Fibroblast_Smooth_mesenchymal_Mesothelial_Small_Preadipocyte_Hair |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
smooth muscle cell of the internal thoracic artery | 7.05e-34 | 2 |
fibroblast of tunica adventitia of artery | 7.35e-18 | 4 |
fibroblast of the aortic adventitia | 7.35e-18 | 4 |
smooth muscle cell of the subclavian artery | 1.83e-14 | 5 |
vascular associated smooth muscle cell | 2.31e-09 | 32 |
aortic smooth muscle cell | 6.13e-08 | 10 |
smooth muscle cell | 3.05e-07 | 43 |
smooth muscle myoblast | 3.05e-07 | 43 |
Ontology term | p-value | n |
---|---|---|
internal thoracic artery | 7.05e-34 | 2 |
systemic artery | 5.33e-19 | 33 |
systemic arterial system | 5.33e-19 | 33 |
artery wall | 7.35e-18 | 4 |
tunica adventitia of artery | 7.35e-18 | 4 |
adventitia | 7.35e-18 | 4 |
tunica adventitia of blood vessel | 7.35e-18 | 4 |
aorta tunica adventitia | 7.35e-18 | 4 |
aorta wall | 7.35e-18 | 4 |
artery | 3.52e-15 | 42 |
arterial blood vessel | 3.52e-15 | 42 |
arterial system | 3.52e-15 | 42 |
thoracic segment blood vessel | 1.83e-14 | 5 |
subclavian artery | 1.83e-14 | 5 |
aorta | 1.02e-13 | 21 |
aortic system | 1.02e-13 | 21 |
epithelial tube open at both ends | 3.99e-11 | 59 |
blood vessel | 3.99e-11 | 59 |
blood vasculature | 3.99e-11 | 59 |
vascular cord | 3.99e-11 | 59 |
blood vessel layer | 8.16e-11 | 7 |
trunk blood vessel | 9.89e-11 | 7 |
vessel | 8.58e-10 | 68 |
vasculature | 1.14e-08 | 78 |
vascular system | 1.14e-08 | 78 |
splanchnic layer of lateral plate mesoderm | 3.31e-08 | 83 |
blood vessel smooth muscle | 6.13e-08 | 10 |
arterial system smooth muscle | 6.13e-08 | 10 |
artery smooth muscle tissue | 6.13e-08 | 10 |
aorta smooth muscle tissue | 6.13e-08 | 10 |