FFCP PHASE1:Hg19::chr12:8765428..8765439,-: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
Line 1: | Line 1: | ||
{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=57379 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=13203 | |||
|TSSclassifier=strong | |||
|UniProt=Q546Y9,Q7Z599,Q9GZX7 | |||
|association_with_transcript=2bp_to_NM_020661,uc001qur.2_5end | |||
|coexpression_cluster_id=C62 | |||
|description=CAGE_peak_3_at_AICDA_5end | |||
|id=chr12:8765428..8765439,- | |||
|ontology_enrichment_celltype=CL:0000945!9.28e-52!24;CL:0000826!9.28e-52!24;CL:0000542!5.75e-27!53;CL:0000051!5.75e-27!53;CL:0000838!4.12e-23!52;CL:0000785!2.06e-22!2;CL:0000955!2.06e-22!2;CL:0000818!2.06e-22!2;CL:0000954!2.06e-22!2;CL:0000816!2.06e-22!2;CL:0000817!2.80e-15!3;CL:0000819!3.27e-12!1;CL:0000946!5.62e-12!1;CL:0000786!5.62e-12!1;CL:0000980!5.62e-12!1;CL:0002087!6.16e-11!119;CL:0000738!4.88e-09!140;CL:0002031!1.09e-08!124;CL:0000236!1.93e-07!14;CL:0002032!2.12e-07!165;CL:0000837!2.12e-07!165;CL:0000037!5.01e-07!172;CL:0000566!5.01e-07!172 | |||
|ontology_enrichment_celltype_v019=CL:0000945;1.12e-34;24!CL:0000785;3.61e-34;1!CL:0000819;3.61e-34;1!CL:0000542;8.80e-12;53 | |||
|ontology_enrichment_celltype_v019_2=CL:0000945,1.12e-34,24;CL:0000826,1.12e-34,24;CL:0000819,3.61e-34,1;CL:0000785,7.67e-18,2;CL:0000955,7.67e-18,2;CL:0000818,7.67e-18,2;CL:0000954,7.67e-18,2;CL:0000816,7.67e-18,2;CL:0000838,2.44e-16,52;CL:0000542,4.85e-16,53;CL:0000051,4.85e-16,53;CL:0000817,2.31e-12,3;CL:0002087,1.46e-07,115;CL:0002031,2.91e-07,120 | |||
|ontology_enrichment_development_v019=CL:0000954;7.67e-18;2!CL:0000051;8.80e-12;53 | |||
|ontology_enrichment_disease=DOID:0060058!8.34e-27!10;DOID:0060073!3.27e-12!1;DOID:8675!3.27e-12!1;DOID:630!3.65e-12!1;DOID:0050177!3.65e-12!1;DOID:0050427!3.65e-12!1;DOID:12603!1.32e-11!1;DOID:2531!3.87e-07!51;DOID:0060083!3.87e-07!51 | |||
|ontology_enrichment_disease_v019=DOID:0060058;4.61e-53;10!DOID:0060073;3.61e-34;1!DOID:8675;3.61e-34;1!DOID:630;7.06e-34;1!DOID:0050177;7.06e-34;1!DOID:0050427;7.06e-34;1!DOID:2531;1.05e-07;51!DOID:0060083;1.05e-07;51 | |||
|ontology_enrichment_disease_v019_2=DOID:0060058,4.61e-53,10;DOID:0060073,3.61e-34,1;DOID:8675,3.61e-34,1;DOID:630,5.05e-34,1;DOID:0050177,5.05e-34,1;DOID:0050427,5.05e-34,1;DOID:2531,5.74e-11,51;DOID:0060083,5.74e-11,51 | |||
|ontology_enrichment_uberon=UBERON:0002372!9.61e-12!1;UBERON:0001961!9.61e-12!1;UBERON:0001744!9.61e-12!1;UBERON:0001735!9.61e-12!1;UBERON:0000029!1.07e-11!1;UBERON:0001154!1.47e-11!1;UBERON:0001153!1.47e-11!1 | |||
|ontology_enrichment_uberon_v019=UBERON:0002106;2.89e-12;3!UBERON:0004177;7.01e-08;5!UBERON:0005057;7.01e-08;5 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002106,2.89e-12,3;UBERON:0004854,2.89e-12,3;UBERON:0009034,2.89e-12,3;UBERON:0002095,2.89e-12,3;UBERON:0004782,2.89e-12,3;UBERON:0003281,2.89e-12,3;UBERON:0009664,2.89e-12,3;UBERON:0002296,2.89e-12,3;UBERON:0005602,2.89e-12,3;UBERON:0001179,2.89e-12,3;UBERON:0006293,2.89e-12,3 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.61130724598361,0.656804715599566,1.02324015707783,0,0,0,0,0,0,7.51431845628926,3.2698923472107,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.853460445133014,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.540031437238115,0,0,0,0,0.371606350251437,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.276283915531148,0,0,0.123084805461069,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.00700268137233,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.496166021811951,0,0.60896299190448,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.691403925334676,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.19929387109915,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.213233981900981,0,0,0,0,0,0,0,0,0.5388164241167,0,0,0,0,0,0,0,0,0,0,0.402547587182052,1.9234109538194 | |||
|short_description=p3@AICDA | |||
}} |
Revision as of 11:57, 11 January 2014
Short description: | p3@AICDA |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_3_at_AICDA_5end |
Coexpression cluster: | C62_Burkitt_tonsil_CD19_submaxillary_spleen_salivary_lymph |
Association with transcript: | 2bp_to_NM_020661, uc001qur.2_5end |
EntrezGene: | AICDA |
HGNC: | 13203 |
UniProt: | Q546Y9Q7Z599Q9GZX7 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
lymphocyte of B lineage | 1.12e-34 | 24 |
pro-B cell | 1.12e-34 | 24 |
B-1 B cell | 3.61e-34 | 1 |
mature B cell | 7.67e-18 | 2 |
pre-B-II cell | 7.67e-18 | 2 |
transitional stage B cell | 7.67e-18 | 2 |
small pre-B-II cell | 7.67e-18 | 2 |
immature B cell | 7.67e-18 | 2 |
lymphoid lineage restricted progenitor cell | 2.44e-16 | 52 |
lymphocyte | 4.85e-16 | 53 |
common lymphoid progenitor | 4.85e-16 | 53 |
precursor B cell | 2.31e-12 | 3 |
nongranular leukocyte | 1.46e-07 | 115 |
hematopoietic lineage restricted progenitor cell | 2.91e-07 | 120 |
Ontology term | p-value | n |
---|---|---|
spleen | 2.89e-12 | 3 |
gastrointestinal system mesentery | 2.89e-12 | 3 |
stomach region | 2.89e-12 | 3 |
mesentery | 2.89e-12 | 3 |
gastrointestinal system serosa | 2.89e-12 | 3 |
mesentery of stomach | 2.89e-12 | 3 |
gut mesentery | 2.89e-12 | 3 |
dorsal mesentery | 2.89e-12 | 3 |
dorsal mesogastrium | 2.89e-12 | 3 |
peritoneal cavity | 2.89e-12 | 3 |
spleen primordium | 2.89e-12 | 3 |
Ontology term | p-value | n |
---|---|---|
lymphoma | 4.61e-53 | 10 |
lymphatic system cancer | 3.61e-34 | 1 |
lymphosarcoma | 3.61e-34 | 1 |
genetic disease | 5.05e-34 | 1 |
monogenic disease | 5.05e-34 | 1 |
xeroderma pigmentosum | 5.05e-34 | 1 |
hematologic cancer | 5.74e-11 | 51 |
immune system cancer | 5.74e-11 | 51 |