FFCP PHASE1:Hg19::chr12:8765396..8765408,-: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=57379 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=13203 | |||
|TSSclassifier=strong | |||
|UniProt= | |||
|association_with_transcript=0bp_to_ENST00000545576_5end | |||
|coexpression_cluster_id=C62 | |||
|description=CAGE_peak_2_at_AICDA_5end | |||
|id=chr12:8765396..8765408,- | |||
|ontology_enrichment_celltype=CL:0000945!5.67e-49!24;CL:0000826!5.67e-49!24;CL:0000542!4.80e-28!53;CL:0000051!4.80e-28!53;CL:0000838!7.64e-25!52;CL:0000785!1.08e-15!2;CL:0000955!1.08e-15!2;CL:0000818!1.08e-15!2;CL:0000954!1.08e-15!2;CL:0000816!1.08e-15!2;CL:0002087!8.89e-11!119;CL:0000817!9.10e-11!3;CL:0000819!8.78e-09!1;CL:0002031!8.81e-09!124;CL:0000738!9.56e-09!140;CL:0000946!1.27e-08!1;CL:0000786!1.27e-08!1;CL:0000980!1.27e-08!1;CL:0000236!2.00e-08!14;CL:0000988!3.47e-08!182;CL:0002032!5.29e-07!165;CL:0000837!5.29e-07!165 | |||
|ontology_enrichment_celltype_v019=CL:0000945;8.78e-51;24!CL:0000785;1.31e-16;1!CL:0000819;1.31e-16;1!CL:0000946;2.63e-16;1!CL:0000786;2.63e-16;1!CL:0000542;3.30e-16;53 | |||
|ontology_enrichment_celltype_v019_2=CL:0000945,7.82e-51,24;CL:0000826,7.82e-51,24;CL:0000785,4.04e-31,2;CL:0000955,4.04e-31,2;CL:0000818,4.04e-31,2;CL:0000954,4.04e-31,2;CL:0000816,4.04e-31,2;CL:0000838,1.68e-28,52;CL:0000542,6.00e-28,53;CL:0000051,6.00e-28,53;CL:0000817,4.02e-21,3;CL:0000819,1.21e-16,1;CL:0000946,2.63e-16,1;CL:0000786,2.63e-16,1;CL:0000980,2.63e-16,1;CL:0002087,2.68e-12,115;CL:0002031,9.45e-12,120;CL:0000738,2.90e-10,136;CL:0002032,1.60e-08,161;CL:0000837,1.60e-08,161;CL:0000037,3.98e-08,168;CL:0000988,1.16e-07,177 | |||
|ontology_enrichment_development_v019=CL:0000954;4.36e-31;2!UBERON:0001045;1.31e-16;1!CL:0000051;3.30e-16;53 | |||
|ontology_enrichment_disease=DOID:0060058!3.76e-35!10;DOID:630!6.03e-09!1;DOID:0050177!6.03e-09!1;DOID:0050427!6.03e-09!1;DOID:0060073!8.78e-09!1;DOID:8675!8.78e-09!1;DOID:0060060!1.37e-08!1;DOID:0060061!1.37e-08!1;DOID:8691!1.37e-08!1;DOID:12603!1.71e-08!1;DOID:2355!2.64e-08!1;DOID:2531!4.60e-08!51;DOID:0060083!4.60e-08!51 | |||
|ontology_enrichment_disease_v019=DOID:0060058;1.60e-54;10!DOID:630;5.98e-17;1!DOID:0050177;5.98e-17;1!DOID:0050427;5.98e-17;1!DOID:0060073;1.31e-16;1!DOID:8675;1.31e-16;1!DOID:0060060;2.63e-16;1!DOID:0060061;2.63e-16;1!DOID:8691;2.63e-16;1 | |||
|ontology_enrichment_disease_v019_2=DOID:0060058,1.84e-54,10;DOID:630,5.53e-17,1;DOID:0050177,5.53e-17,1;DOID:0050427,5.53e-17,1;DOID:0060073,1.21e-16,1;DOID:8675,1.21e-16,1;DOID:0060060,3.07e-16,1;DOID:0060061,3.07e-16,1;DOID:8691,3.07e-16,1;DOID:2531,1.42e-10,51;DOID:0060083,1.42e-10,51 | |||
|ontology_enrichment_uberon=UBERON:0004177!1.09e-24!7;UBERON:0002106!1.10e-21!3;UBERON:0004854!1.10e-21!3;UBERON:0009034!1.10e-21!3;UBERON:0002095!1.10e-21!3;UBERON:0004782!1.10e-21!3;UBERON:0003281!1.10e-21!3;UBERON:0009664!1.10e-21!3;UBERON:0002296!1.10e-21!3;UBERON:0005602!1.10e-21!3;UBERON:0001179!1.10e-21!3;UBERON:0006293!1.10e-21!3;UBERON:0001154!1.02e-08!1;UBERON:0001153!1.02e-08!1;UBERON:0002372!1.18e-08!1;UBERON:0001961!1.18e-08!1;UBERON:0001744!1.18e-08!1;UBERON:0001735!1.18e-08!1;UBERON:0000945!1.79e-08!8;UBERON:0010039!1.79e-08!8;UBERON:0002370!8.57e-08!4;UBERON:0005058!8.57e-08!4;UBERON:0009113!8.57e-08!4;UBERON:0003295!8.57e-08!4;UBERON:0005562!8.57e-08!4;UBERON:0001042!7.63e-07!10;UBERON:0009145!7.63e-07!10 | |||
|ontology_enrichment_uberon_v019=UBERON:0001154;1.31e-16;1!UBERON:0001153;1.31e-16;1!UBERON:0009854;1.31e-16;1!UBERON:0002372;2.63e-16;1!UBERON:0001961;2.63e-16;1!UBERON:0001744;2.63e-16;1!UBERON:0001042;2.63e-16;1!UBERON:0001735;2.63e-16;1!UBERON:0006562;8.09e-09;2 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001154,1.65e-16,1;UBERON:0001153,1.65e-16,1;UBERON:0001045,1.65e-16,1;UBERON:0002372,2.25e-16,1;UBERON:0001961,2.25e-16,1;UBERON:0001744,2.25e-16,1;UBERON:0001735,2.25e-16,1 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.74425688164961,4.92603536699674,5.50975469195755,0,0,0,0,0,0,15.3385057148997,9.2410001116824,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.426730222566507,0.800791974072025,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.232387885739037,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.929015875628594,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.03912307084262,0,0,0.861593638227486,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.995261931078505,0,0,0,0.988511511572023,0.417687798021821,0,0,0,3.28418620588199,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.254019996197353,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.31405936923702,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.19992437512958,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.38280785066935,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0939839179798536,0.128915775947154,3.19811698959773,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0918948995348449,0,0,0,0,0,0,0,0.0645889098360061,0.248298857183432,0,0,0,0,0,1.54909721933551,0,0,0,0,0,0,0,0,0,0,0.402547587182052,9.61705476909699 | |||
|short_description=p2@AICDA | |||
}} |
Revision as of 11:57, 11 January 2014
Short description: | p2@AICDA |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_2_at_AICDA_5end |
Coexpression cluster: | C62_Burkitt_tonsil_CD19_submaxillary_spleen_salivary_lymph |
Association with transcript: | 0bp_to_ENST00000545576_5end |
EntrezGene: | AICDA |
HGNC: | 13203 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
lymphocyte of B lineage | 7.82e-51 | 24 |
pro-B cell | 7.82e-51 | 24 |
mature B cell | 4.04e-31 | 2 |
pre-B-II cell | 4.04e-31 | 2 |
transitional stage B cell | 4.04e-31 | 2 |
small pre-B-II cell | 4.04e-31 | 2 |
immature B cell | 4.04e-31 | 2 |
lymphoid lineage restricted progenitor cell | 1.68e-28 | 52 |
lymphocyte | 6.00e-28 | 53 |
common lymphoid progenitor | 6.00e-28 | 53 |
precursor B cell | 4.02e-21 | 3 |
B-1 B cell | 1.21e-16 | 1 |
antibody secreting cell | 2.63e-16 | 1 |
plasma cell | 2.63e-16 | 1 |
plasmablast | 2.63e-16 | 1 |
nongranular leukocyte | 2.68e-12 | 115 |
hematopoietic lineage restricted progenitor cell | 9.45e-12 | 120 |
leukocyte | 2.90e-10 | 136 |
hematopoietic oligopotent progenitor cell | 1.60e-08 | 161 |
hematopoietic multipotent progenitor cell | 1.60e-08 | 161 |
hematopoietic stem cell | 3.98e-08 | 168 |
hematopoietic cell | 1.16e-07 | 177 |
Ontology term | p-value | n |
---|---|---|
vermiform appendix | 1.65e-16 | 1 |
caecum | 1.65e-16 | 1 |
midgut | 1.65e-16 | 1 |
tonsil | 2.25e-16 | 1 |
mucosa-associated lymphoid tissue | 2.25e-16 | 1 |
lymphoid tissue | 2.25e-16 | 1 |
tonsillar ring | 2.25e-16 | 1 |
Ontology term | p-value | n |
---|---|---|
lymphoma | 1.84e-54 | 10 |
genetic disease | 5.53e-17 | 1 |
monogenic disease | 5.53e-17 | 1 |
xeroderma pigmentosum | 5.53e-17 | 1 |
lymphatic system cancer | 1.21e-16 | 1 |
lymphosarcoma | 1.21e-16 | 1 |
non-Hodgkin lymphoma | 3.07e-16 | 1 |
cutaneous T cell lymphoma | 3.07e-16 | 1 |
mycosis fungoides | 3.07e-16 | 1 |
hematologic cancer | 1.42e-10 | 51 |
immune system cancer | 1.42e-10 | 51 |