FFCP PHASE1:Hg19::chr12:7170214..7170228,+: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=not supported | |||
|DPIdataset=robust | |||
|EntrezGene=716 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=novel_coding | |||
|HGNC=1247 | |||
|TSSclassifier=strong | |||
|UniProt= | |||
|association_with_transcript=0bp_to_AK025309_5end | |||
|coexpression_cluster_id=C424 | |||
|description=CAGE_peak_9_at_C1S_5end | |||
|id=chr12:7170214..7170228,+ | |||
|ontology_enrichment_celltype=CL:0000057!1.25e-09!75;CL:0000136!3.89e-09!15;CL:0002334!3.36e-07!12 | |||
|ontology_enrichment_celltype_v019=CL:0000136;1.26e-18;13!CL:0000499;2.31e-11;28!CL:0000135;1.36e-10;3!CL:0002521;1.36e-10;3!CL:0000388;1.36e-10;3!CL:0002615;1.81e-10;3!CL:0000153;1.26e-08;9!CL:0000447;1.26e-08;9!CL:0002195;2.11e-07;2!CL:0002571;2.11e-07;2!CL:0002617;2.11e-07;2!CL:0000327;5.69e-07;15!CL:0000182;9.33e-07;12 | |||
|ontology_enrichment_celltype_v019_2=CL:0000136,3.85e-19,15;CL:0000499,1.57e-11,28;CL:0000135,1.15e-10,3;CL:0000388,1.15e-10,3;CL:0002521,1.27e-10,3;CL:0002615,2.82e-10,3;CL:0000153,6.11e-09,9;CL:0000447,6.11e-09,9;CL:0002195,2.09e-07,2;CL:0002571,2.09e-07,2;CL:0002617,3.58e-07,2;CL:0000327,3.71e-07,15;CL:0000182,9.44e-07,12 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002100!4.87e-08!216;UBERON:0004457!1.43e-07!12;UBERON:0000042!1.43e-07!12 | |||
|ontology_enrichment_uberon_v019=UBERON:0002107;1.82e-12;19!UBERON:0006925;1.82e-12;19!UBERON:0007846;1.36e-10;3!UBERON:0000043;1.36e-10;3!UBERON:0007845;1.36e-10;3!UBERON:0002190;1.36e-10;3!UBERON:0002423;4.76e-09;25!UBERON:0004457;4.98e-09;9!UBERON:0000042;4.98e-09;9!UBERON:0002365;5.92e-07;31!UBERON:0002330;5.92e-07;31 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002107,1.98e-12,19;UBERON:0006925,1.98e-12,19;UBERON:0008836,1.98e-12,19;UBERON:0007846,1.15e-10,3;UBERON:0000043,1.15e-10,3;UBERON:0007845,1.15e-10,3;UBERON:0002190,1.27e-10,3;UBERON:0008835,1.72e-10,22;UBERON:0003894,1.72e-10,22;UBERON:0009854,5.86e-10,23;UBERON:0007499,5.06e-09,25;UBERON:0009497,5.06e-09,25;UBERON:0000015,5.06e-09,25;UBERON:0002423,5.06e-09,25;UBERON:0006235,5.06e-09,25;UBERON:0004161,5.06e-09,25;UBERON:0009856,1.31e-08,26;UBERON:0003929,5.23e-07,54;UBERON:0002365,6.02e-07,31;UBERON:0002330,6.02e-07,31 | |||
|phase1_expression=2.18014055124668,1.2846031433459,2.67813367782345,2.00146596706261,1.34088328328186,0,2.53299878168311,3.79031924056099,1.56711376919903,0,0,0,0,0.495065411840187,0.331397375727916,0,0,0,0,0,0,0,0.286235987131057,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.670700859703636,0.639312809217652,0,0.50133791063589,1.88300474649071,1.5905718941022,1.94653948121054,0,0,0,0.458426764241994,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.496971951695318,0.633152558322899,1.98613771219828,3.44203944898576,0,0.560677600142307,0,0.24666754841716,0,0.134710672069688,0,0.756787138224657,0,0,0,0.570471821544449,0,0,0,0,0,0,0.103325781175765,5.94001428641027,1.7308685049499,0,0,0,0,0,0,0.30648779579902,1.05166641234618,0.113432183160021,0,0.640672166455702,1.90738711043606,0,0.515262646192195,0,0.37223371266318,0,0.779496041289589,0.252433774244115,1.65689817556139,2.42469085228218,0,0,0.169560592310488,0,0,0,0,0,0,0,0,0.36497735907583,0,0.643240938192885,0,1.39310378409594,0,0,0,0,0.110293972732394,0,0,0,0,0,0,0,0,1.47008711385542,8.87285243752816,9.82827216677626,4.13552934676983,0,0,0.171567810298526,0,0,0,0,0,0,0,0,0,0.144366447761074,0.462985512576611,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.904902010304444,0,0.845302752556,0.797814349754612,0,0,0,0,1.57275793023962,0,0,0,2.48774364119782,0,2.41151501647669,0,0.699810938274399,0,0,0,0,0,0,0,0.410952645100767,0,0,0,0,0,0,0,0,0,0,0,0,0,1.34960640891054,0,0,1.45579603071565,0.178428988797162,0.630809660135739,0.585707074963566,0.300946099727719,0,0,0,0,0.521301686808497,0.195801157462741,0,0,0,0,0,0,0,0.496215615637554,1.07423381301644,0.561320188866147,0.896974044789907,0.511707249066704,0.160853921143607,0,0.154209693802656,0.532685175939381,0.164254312027618,1.55776328755086,0.348631135379878,0,0.200506470303285,0,1.37777337797528,0.546273504020151,1.57349297951309,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.95777922130672,0,0,0,0,3.21367859688319,0.193341436584244,0.154048617114644,0.460511024178389,0,0.214840489736547,0,0,0.534192213880424,0,0.192190067365106,0,0,0,0.94443704049192,0.6970372701606,1.23213432070436,0,0,0,0,0,0.316379424718726,0.38126038784765,0,0.855877976067841,0.636406495851874,0,0.899362287916574,0,0.353437207037059,0,0,0,0,2.68084838594413,0,0,0.565621727814851,0,0,0,0,0.578775534266688,0,0,0,0,0,0.196498082026242,0,0,2.9555068941673,2.96365403663912,0,0,0,0,0,3.29503302718727,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.02555725490326,0,0,0,0,0,0,0,0,0.222617410045812,0,0,0.398495976502139,0.276283915531148,0,0,0,0.311039587661807,0,0,0,0.493217028184668,0,0,0,0,0,0,0,0.724999575434793,0,0,0.236387681767936,0,0,0,0,0,0,0,0,0,0.21787692703798,0,0.846452843541768,1.59518878185802,0,0,0,0.31900115973192,0.183195186803725,0,0,0,0,0,0,0,0,0,0,0,0,0,1.99052386215701,0.265372693510018,0,0,0,0,0,0,0,0,0,0,0,0,0,2.21153028699708,0.150323419414493,0,0,0,0,0,0,0,0,0,0,0.698906672968121,0,0,0,0,0.969890164884194,0,0.677942222341597,0,0,0,0,0.240476460754601,0.426905989478705,0,0,0,0,0,0,0,0,0,0.101998217636322,0.288950589901519,0,0,0,0.859530882839914,0,0.558564802544508,0,0,0,0,0.223171457441873,0.201550417460179,0.360299883542404,0,0.157566364614447,0,0.202210631562555,0,0,0,0.136203406111576,0.160753148465019,0,0,0,0,0,0,0.472834243795189,0.209818352539992,0,0,0,0.714695326373367,0,0,0.542999601753713,0,0,0,0,0,0.113312091520126,4.9827759450548,0,0,0,0,0,0.320362237703084,0,1.65695622138878,0,0,0,0,1.63205341010842,0,0,0.327872630709804,0,0,0,0,0,0,0.0620964029413835,0,0,0,0,0.235265819698172,0,0,0,0.467426619694449,0.554805861502613,0.189403005275089,1.76097531226803,0.889811221596536,0.915360273587694,1.20984739010591,0,0,0.318593534327405,0.899606224327209,0.155262956876259,0.829412415681711,0.53168342911599,0,1.80309130796662,0.761610424337591,0,0.181848659202559,0.107410557042488,0.464033759878494,0,0,0.343395705182793,1.01024846629776,0,0,0.643324774124777,0,1.81364740409818,0,0.244736704506468,0,0.308801447160972,1.75427239662966,0,0.192914038270915,0.675769762612291,0,0.345430341731199,0,0.138258436151731,0,0,0,0,0.491545817507439,0,0,0,0,0,0.736423801007363,0,0,0,0,0,0,0,0,0,0,0.318004350653419,0,0,2.46873160583479,1.531227386766,0,0,0,0,0,0,0.161475645631851,0,0,0.11796972334774,0.366857197043358,0,0,0,0,1.72983755203292,0,0,0,0,0,0,0,0,0.0634158101939068,0,0,0,0,0,0,0,0,0,0.443511850813194,0,1.54339208493677,0,0,0,0,1.02041020705668,0,0,0,0,0.47775168788705,0.500335809236594,0,0,0,0,0,0,0,0.430227358820278,0,0,0,0,0,0,0,0,0,0.647428837187895,0.718639647993729,1.1598144313382,0.485710993059139,0,0,0,0,0,0,0.308696632431779,0.218559560503957,0,0.980593287015622,0,0,0.297046400327086,0,0.339854229375634,0.939839179798536,0.257831551894309,0,0.535661815816973,0,0,0,0,0,0,0.0679914901909147,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| |||
|short_description=p9@C1S | |||
}} |
Revision as of 11:52, 11 January 2014
Short description: | p9@C1S |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | No |
Description: | CAGE_peak_9_at_C1S_5end |
Coexpression cluster: | C424_Hepatocyte_liver_Synoviocyte_tenocyte_Fibroblast_Adipocyte_Cardiac |
Association with transcript: | 0bp_to_AK025309_5end |
EntrezGene: | C1S |
HGNC: | 1247 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
fat cell | 3.85e-19 | 15 |
stromal cell | 1.57e-11 | 28 |
fibrocyte | 1.15e-10 | 3 |
tendon cell | 1.15e-10 | 3 |
subcutaneous fat cell | 1.27e-10 | 3 |
adipocyte of omentum tissue | 2.82e-10 | 3 |
GAG secreting cell | 6.11e-09 | 9 |
carbohydrate secreting cell | 6.11e-09 | 9 |
hepatic stem cell | 2.09e-07 | 2 |
hepatic mesenchymal stem cell | 2.09e-07 | 2 |
adipocyte of breast | 3.58e-07 | 2 |
extracellular matrix secreting cell | 3.71e-07 | 15 |
hepatocyte | 9.44e-07 | 12 |
Ontology term | p-value | n |
---|---|---|
liver | 1.98e-12 | 19 |
digestive gland | 1.98e-12 | 19 |
liver bud | 1.98e-12 | 19 |
dense regular connective tissue | 1.15e-10 | 3 |
tendon | 1.15e-10 | 3 |
regular connective tissue | 1.15e-10 | 3 |
subcutaneous adipose tissue | 1.27e-10 | 3 |
hepatic diverticulum | 1.72e-10 | 22 |
liver primordium | 1.72e-10 | 22 |
digestive tract diverticulum | 5.86e-10 | 23 |
epithelial sac | 5.06e-09 | 25 |
epithelium of foregut-midgut junction | 5.06e-09 | 25 |
anatomical boundary | 5.06e-09 | 25 |
hepatobiliary system | 5.06e-09 | 25 |
foregut-midgut junction | 5.06e-09 | 25 |
septum transversum | 5.06e-09 | 25 |
sac | 1.31e-08 | 26 |
gut epithelium | 5.23e-07 | 54 |
exocrine gland | 6.02e-07 | 31 |
exocrine system | 6.02e-07 | 31 |