FFCP PHASE1:Hg19::chr12:56732676..56732690,+: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=51561 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=15488 | |||
|TSSclassifier=strong | |||
|UniProt=Q9NPF7 | |||
|association_with_transcript=13bp_to_ENST00000228534,NM_016584,uc001sla.2_5end | |||
|description=CAGE_peak_2_at_IL23A_5end | |||
|id=chr12:56732676..56732690,+ | |||
|ontology_enrichment_celltype=CL:0000738!1.10e-31!140;CL:0000838!2.00e-30!52;CL:0000542!1.61e-29!53;CL:0000051!1.61e-29!53;CL:0002087!7.69e-28!119;CL:0002031!1.00e-24!124;CL:0000037!7.91e-22!172;CL:0000566!7.91e-22!172;CL:0002032!8.83e-20!165;CL:0000837!8.83e-20!165;CL:0000988!4.24e-19!182;CL:0000791!2.03e-17!18;CL:0000789!2.03e-17!18;CL:0002420!2.03e-17!18;CL:0002419!2.03e-17!18;CL:0000790!2.03e-17!18;CL:0000084!4.45e-17!25;CL:0000827!4.45e-17!25;CL:0000625!1.85e-12!11;CL:0000945!6.91e-12!24;CL:0000826!6.91e-12!24;CL:0000236!2.64e-10!14;CL:0000624!5.11e-08!6;CL:0002057!1.35e-07!42 | |||
|ontology_enrichment_celltype_v019=CL:0000791;2.08e-30;18!CL:0000789;2.08e-30;18!CL:0002419;2.08e-30;18!CL:0000625;4.56e-21;11!CL:0000084;2.03e-20;25!CL:0000542;7.84e-15;53!CL:0000624;4.55e-13;6!CL:0002087;3.88e-11;104!CL:0000236;3.74e-10;13!CL:0000898;3.94e-07;3 | |||
|ontology_enrichment_celltype_v019_2=CL:0000791,1.38e-30,18;CL:0000789,1.38e-30,18;CL:0002420,1.38e-30,18;CL:0002419,1.38e-30,18;CL:0000790,1.38e-30,18;CL:0000838,7.71e-25,52;CL:0000542,3.35e-24,53;CL:0000051,3.35e-24,53;CL:0000738,3.50e-24,136;CL:0002087,9.33e-23,115;CL:0000625,3.72e-21,11;CL:0000084,1.53e-20,25;CL:0000827,1.53e-20,25;CL:0002031,2.99e-20,120;CL:0000037,7.37e-17,168;CL:0002032,2.21e-15,161;CL:0000837,2.21e-15,161;CL:0000988,2.68e-15,177;CL:0000624,3.58e-13,6;CL:0000236,3.15e-09,14;CL:0000898,3.25e-07,3;CL:0000623,9.25e-07,3;CL:0000825,9.25e-07,3 | |||
|ontology_enrichment_development_v019=CL:0000790;2.08e-30;18!CL:0000051;7.84e-15;53 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002193!1.29e-07!112;UBERON:0002390!1.73e-07!102;UBERON:0003061!1.73e-07!102 | |||
|ontology_enrichment_uberon_v019=UBERON:0000178;4.02e-08;15!UBERON:0000179;4.02e-08;15!UBERON:0000463;4.02e-08;15 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000178,4.57e-08,15;UBERON:0000179,4.57e-08,15;UBERON:0000463,4.57e-08,15 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0.737201809504527,2.79120467188971,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.229240217243854,0.328402357799783,0.0787107813136792,1.96682138424452,1.53531759238885,0.928896739896456,0,0,0,0.154934401160603,0,0.293600439334847,0.553995408531877,1.60435557976113,5.4252717678963,0,0.32389366601898,0.257575567634187,0.290796477559129,0,0,0.929716147622738,0,0,0.28769239232215,0.256160706529101,0.236482229888585,1.72372840368309,1.29096936716765,5.41705946377367,0,0,0,0.918251677112708,2.24650318953266,3.19668562899521,0,0.199463657621632,0,5.80418477257168,7.37600792098482,14.3249117268982,0.502497330513487,0,0.434377689410233,3.63239701580021,8.83866326370155,12.0255707227536,0,0,0,0,0.150176892841506,0,0,0,0,7.03984977845291,1.09227722252426,1.77901850772711,4.69403244823158,0.800791974072025,4.59801951963587,0.661044872784862,0.954053754535364,1.70763890732835,1.17447437874188,2.29363936875137,0,3.36305137788922,0,9.04864942523632,13.7553766962208,4.72883447698871,5.85152733867373,4.88883399950386,3.31413464014313,1.94826728407911,9.58129929212493,3.53527088969805,3.98761010250518,1.35401931882508,4.09892223122161,2.34106825607781,3.12432018746985,3.31620021343018,2.89803085735052,4.59688345802387,3.47803076516627,5.22677619024884,2.49280553934646,6.89796888483458,4.46715679127419,5.31341353240956,4.77848121486145,3.25541726928209,3.8018081777935,3.76437797694432,3.4556385011693,3.74792179657038,4.02521328474829,3.28451198768419,3.42731463482045,7.48832548193821,6.37227377084316,0,0,0,0,0,0,0,0,0,0,0.175669571386252,0,0,0,0,0,0,0.238490624305342,0,0,0,0,0,0,0,0,0,0,0,0,0.402829317109147,0,0.24406205754817,0,0,0,0,0,0,0,0,1.31780417436063,7.75560528296651,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.57978255948989,1.09098448236334,0.286804595389004,0.975789649036763,0.397589304964456,1.62671520017326,1.45125477021519,0.756962552626885,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.441463099414651,0,0,0,0,0.904760751704678,0,0,0,0,0,0,0.144366447761074,0.925971025153221,0.570762456703795,0,0,0,0,0,0.93733833986777,2.01578553838631,1.27597587518148,0,0.290633938513962,0.766765358330422,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.56139988262505,4.52817907204986,3.59360501583295,0,0,0,0,0,0.749007023947182,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.6541442089831,3.01999881146064,2.77491650288955,0,0,0,0,0,0,0,0,0,0,0.154209693802656,0,0,0,0,0,0.200506470303285,0,0,0,0,5.41439535488894,1.84836809050595,2.35304930753057,0,0.949964660035881,0,0,0,0,0,0,1.01950509218015,0.831076008928724,0.671624264166535,0,0,0,0,0,0.103041011647722,0,0,0.574265537996172,0,0,0,0,0,0,0,0,0,0,0.330569830721956,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0962221127255121,0,0,0,0.43050537267123,1.68471475667626,0.443430153536676,0.689170200620878,0.507447609232169,1.52927441428475,2.27858874869665,1.42939065274673,1.23408681925858,1.29694662238543,2.16012574895246,0.79312517629427,0,0,0.245040215981032,0,0,0.284567373393656,0.637705090915289,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.278406173895242,0,0,0,0,0,0,0,0.111443384277478,0,0,0,0,0,0,0,0,0.211125408127993,0,0.552567831062295,0,0.102268682502155,0.615424027305347,0,1.16828856491525,0,0,0.0986434056369336,0,0,0,0,0,0,0,0,0.227586896570999,0.254253650292766,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.843992258112108,1.30586246527318,0,0,0,0.0884575645033392,0,0,0,0,0,0,0,1.094728735294,0,0,0,0,0,0,0,0,0,0,0,0,0.284609546029793,0,0,0.195984794828755,0.261177619741208,0,0,0,0,0,0.0969890164884194,0.353024506766001,0,0,0,0,0.195551382734803,0.0801588202515337,0.213452994739353,0,0,0,0,0.14405479798815,0,0,0,0.104602846312333,0,0,0,0,0,0,0.262887354279314,0,0,0,0,0,0,0,0,1.16495949527454,0,0,0,0,0.0846733320657845,0,0,1.60753148465019,0.275078873194468,1.24632101408756,6.74921674654501,3.0952078182318,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.106787412567695,0,0,0,1.7785046870815,0.121792598380896,0.638341257770182,0,0,0,0,6.43921794625961,0,0,0,0,0,0,0,0,0,0,0,0,1.30428925749743,0,0,0,0,0,0,0,0,0,0,0.159296767163702,0,0,0,0,0,0,0,0,0,0.107410557042488,0,0,0,0,0,0,0,0,0,0,0.231522474323834,0,0,0,0,0,0,0,0,0.345430341731199,0,0,0.584580926518165,0.531459361253452,0.327130788511688,0,0,0.211312123358627,0.19998739585493,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.11796972334774,0.183428598521679,0,0,0,0,0,1.0085253435176,0,0,0,2.51355346568977,0,0,0,0,0,0,0,0,0.127762427639595,0,0,0,0,0,0.230467975111559,0,0,0,0,0.111231401892069,0.078493092850514,0,0.280272163313789,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,5.36906072629403,0.785201868921944,0,0,0,0,0,1.16969731731053,0.397901550322736,0,5.19551977379216,0,1.35866559210006,0.0771741581079447,0.218559560503957,10.3469805199535,0,0,0,0,0,0,0,0.322289439867886,0.399764623699716,0.178553938605658,1.05868461514708,0.0802413666891683,0,0,0,0,0,0,0,0,0,0,0,0,0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| |||
|short_description=p2@IL23A | |||
}} |
Revision as of 14:02, 11 January 2014
Short description: | p2@IL23A |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_2_at_IL23A_5end |
Coexpression cluster: | NA |
Association with transcript: | 13bp_to_ENST00000228534, NM_016584, uc001sla.2_5end |
EntrezGene: | IL23A |
HGNC: | 15488 |
UniProt: | Q9NPF7 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
mature alpha-beta T cell | 1.38e-30 | 18 |
alpha-beta T cell | 1.38e-30 | 18 |
immature T cell | 1.38e-30 | 18 |
mature T cell | 1.38e-30 | 18 |
immature alpha-beta T cell | 1.38e-30 | 18 |
lymphoid lineage restricted progenitor cell | 7.71e-25 | 52 |
lymphocyte | 3.35e-24 | 53 |
common lymphoid progenitor | 3.35e-24 | 53 |
leukocyte | 3.50e-24 | 136 |
nongranular leukocyte | 9.33e-23 | 115 |
CD8-positive, alpha-beta T cell | 3.72e-21 | 11 |
T cell | 1.53e-20 | 25 |
pro-T cell | 1.53e-20 | 25 |
hematopoietic lineage restricted progenitor cell | 2.99e-20 | 120 |
hematopoietic stem cell | 7.37e-17 | 168 |
hematopoietic oligopotent progenitor cell | 2.21e-15 | 161 |
hematopoietic multipotent progenitor cell | 2.21e-15 | 161 |
hematopoietic cell | 2.68e-15 | 177 |
CD4-positive, alpha-beta T cell | 3.58e-13 | 6 |
B cell | 3.15e-09 | 14 |
naive T cell | 3.25e-07 | 3 |
natural killer cell | 9.25e-07 | 3 |
pro-NK cell | 9.25e-07 | 3 |
Ontology term | p-value | n |
---|---|---|
blood | 4.57e-08 | 15 |
haemolymphatic fluid | 4.57e-08 | 15 |
organism substance | 4.57e-08 | 15 |