FFCP PHASE1:Hg19::chr12:56109875..56109898,+: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=2647 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=4200 | |||
|TSSclassifier=strong | |||
|UniProt=P78537 | |||
|association_with_transcript=55bp_to_ENST00000257899,uc001shi.2_5end | |||
|description=CAGE_peak_2_at_BLOC1S1_5end | |||
|id=chr12:56109875..56109898,+ | |||
|ontology_enrichment_celltype=CL:0000548!7.34e-13!679;CL:0000004!7.34e-13!679;CL:0000255!7.34e-13!679;CL:0000055!1.10e-12!180;CL:0000012!1.15e-12!682;CL:0000183!4.02e-11!59;CL:0000144!4.83e-11!625;CL:0000393!1.42e-10!60;CL:0000211!1.42e-10!60;CL:0000222!1.65e-10!119;CL:0002371!5.23e-09!591;CL:0000187!5.66e-09!54;CL:0000680!1.25e-08!57;CL:0000056!1.25e-08!57;CL:0000355!1.25e-08!57;CL:0000003!6.60e-08!722;CL:0000192!4.21e-07!42;CL:0000514!4.21e-07!42 | |||
|ontology_enrichment_celltype_v019= | |||
|ontology_enrichment_celltype_v019_2=CL:0000222,5.76e-11,121;CL:0000393,6.98e-11,61;CL:0000211,6.98e-11,61;CL:0000187,2.83e-09,55;CL:0000680,6.38e-09,58;CL:0000056,6.38e-09,58;CL:0000355,6.38e-09,58;CL:0000192,2.14e-07,43;CL:0000514,2.14e-07,43;CL:0002321,8.82e-07,250 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000914!1.85e-10!83;UBERON:0002329!1.85e-10!83;UBERON:0003077!1.85e-10!83;UBERON:0003059!1.85e-10!83;UBERON:0007282!1.85e-10!83;UBERON:0009618!1.85e-10!83;UBERON:0007285!1.85e-10!83;UBERON:0004290!3.99e-10!70;UBERON:0001134!2.03e-09!61;UBERON:0002036!2.03e-09!61;UBERON:0003082!2.03e-09!61;UBERON:0002385!1.16e-08!63;UBERON:0001015!1.16e-08!63;UBERON:0000383!1.16e-08!63;UBERON:0002049!6.86e-08!79;UBERON:0007798!6.86e-08!79;UBERON:0000486!1.57e-07!82;UBERON:0005256!2.91e-07!143 | |||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2=UBERON:0007503,7.30e-13,78;UBERON:0007524,1.70e-10,73;UBERON:0002329,2.02e-10,71;UBERON:0003059,2.02e-10,71;UBERON:0007282,2.02e-10,71;UBERON:0004290,2.02e-10,71;UBERON:0009618,2.02e-10,71;UBERON:0003077,4.47e-10,72;UBERON:0007285,4.47e-10,72;UBERON:0001134,1.02e-09,62;UBERON:0002036,1.02e-09,62;UBERON:0003082,1.02e-09,62;UBERON:0002385,5.99e-09,64;UBERON:0001015,5.99e-09,64;UBERON:0000383,5.99e-09,64;UBERON:0002049,8.51e-08,78;UBERON:0007798,8.51e-08,78;UBERON:0000486,8.75e-08,83 | |||
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| |||
|short_description=p2@BLOC1S1 | |||
}} |
Revision as of 13:54, 11 January 2014
Short description: | p2@BLOC1S1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_2_at_BLOC1S1_5end |
Coexpression cluster: | NA |
Association with transcript: | 55bp_to_ENST00000257899, uc001shi.2_5end |
EntrezGene: | BLOC1S1 |
HGNC: | 4200 |
UniProt: | P78537 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
mesodermal cell | 5.76e-11 | 121 |
electrically responsive cell | 6.98e-11 | 61 |
electrically active cell | 6.98e-11 | 61 |
muscle cell | 2.83e-09 | 55 |
muscle precursor cell | 6.38e-09 | 58 |
myoblast | 6.38e-09 | 58 |
multi-potent skeletal muscle stem cell | 6.38e-09 | 58 |
smooth muscle cell | 2.14e-07 | 43 |
smooth muscle myoblast | 2.14e-07 | 43 |
embryonic cell | 8.82e-07 | 250 |
Ontology term | p-value | n |
---|---|---|
epithelial vesicle | 7.30e-13 | 78 |
dense mesenchyme tissue | 1.70e-10 | 73 |
somite | 2.02e-10 | 71 |
presomitic mesoderm | 2.02e-10 | 71 |
presumptive segmental plate | 2.02e-10 | 71 |
dermomyotome | 2.02e-10 | 71 |
trunk paraxial mesoderm | 2.02e-10 | 71 |
paraxial mesoderm | 4.47e-10 | 72 |
presumptive paraxial mesoderm | 4.47e-10 | 72 |
skeletal muscle tissue | 1.02e-09 | 62 |
striated muscle tissue | 1.02e-09 | 62 |
myotome | 1.02e-09 | 62 |
muscle tissue | 5.99e-09 | 64 |
musculature | 5.99e-09 | 64 |
musculature of body | 5.99e-09 | 64 |
vasculature | 8.51e-08 | 78 |
vascular system | 8.51e-08 | 78 |
multilaminar epithelium | 8.75e-08 | 83 |