FFCP PHASE1:Hg19::chr12:56105984..56106019,-: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=3679 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=6143 | |||
|TSSclassifier=strong | |||
|UniProt= | |||
|association_with_transcript=0bp_to_ENST00000553276_5end | |||
|coexpression_cluster_id=C29 | |||
|description=CAGE_peak_4_at_ITGA7_5end | |||
|id=chr12:56105984..56106019,- | |||
|ontology_enrichment_celltype=CL:0000136!6.45e-21!15;CL:0002521!3.93e-08!3;CL:0002615!9.76e-08!3;CL:0000325!2.16e-07!39 | |||
|ontology_enrichment_celltype_v019=CL:0000136;2.25e-57;13!CL:0002521;9.98e-20;3!CL:0002615;9.87e-19;3 | |||
|ontology_enrichment_celltype_v019_2=CL:0000136,2.36e-49,15;CL:0002521,1.06e-19,3;CL:0002615,1.30e-18,3 | |||
|ontology_enrichment_development_v019=UBERON:0004874;8.01e-08;1!UBERON:0010226;1.18e-07;1!UBERON:0004140;1.18e-07;1!UBERON:0010227;1.74e-07;1!UBERON:0005062;2.55e-07;4!UBERON:0007284;2.55e-07;4 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019=DOID:114;1.27e-13;2!DOID:178;1.18e-07;1!DOID:326;1.18e-07;1!DOID:3978;1.18e-07;1!DOID:3394;1.18e-07;1!DOID:5844;1.18e-07;1!DOID:1287;3.08e-07;4 | |||
|ontology_enrichment_disease_v019_2=DOID:114,1.44e-13,2;DOID:178,1.30e-07,1;DOID:326,1.30e-07,1;DOID:3978,1.30e-07,1;DOID:3394,1.30e-07,1;DOID:5844,1.30e-07,1;DOID:1287,3.28e-07,4 | |||
|ontology_enrichment_uberon=UBERON:0007023!2.18e-53!115;UBERON:0001049!7.12e-26!57;UBERON:0005068!7.12e-26!57;UBERON:0006241!7.12e-26!57;UBERON:0007135!7.12e-26!57;UBERON:0001017!7.70e-25!82;UBERON:0005743!3.18e-23!86;UBERON:0002616!8.61e-23!59;UBERON:0000955!1.30e-22!69;UBERON:0006238!1.30e-22!69;UBERON:0003080!7.22e-22!42;UBERON:0001893!6.99e-21!34;UBERON:0001869!2.35e-20!32;UBERON:0002780!2.81e-20!41;UBERON:0001890!2.81e-20!41;UBERON:0006240!2.81e-20!41;UBERON:0000073!4.33e-20!94;UBERON:0001016!4.33e-20!94;UBERON:0003075!1.30e-19!86;UBERON:0007284!1.30e-19!86;UBERON:0002791!1.93e-19!33;UBERON:0002020!1.02e-18!34;UBERON:0003528!1.02e-18!34;UBERON:0002346!2.52e-18!90;UBERON:0002619!4.15e-17!22;UBERON:0001950!2.35e-16!20;UBERON:0000153!2.10e-15!129;UBERON:0007811!2.10e-15!129;UBERON:0000956!1.11e-14!25;UBERON:0000203!1.11e-14!25;UBERON:0000033!1.31e-13!123;UBERON:0003056!3.99e-13!61;UBERON:0004121!2.09e-12!169;UBERON:0000924!7.21e-12!173;UBERON:0006601!7.21e-12!173;UBERON:0001871!3.86e-09!7;UBERON:0000200!2.06e-08!6;UBERON:0002420!3.76e-08!9;UBERON:0007245!3.76e-08!9;UBERON:0010009!3.76e-08!9;UBERON:0010011!3.76e-08!9;UBERON:0000454!3.76e-08!9;UBERON:0002190!3.93e-08!3;UBERON:0000064!5.66e-08!219;UBERON:0000475!1.50e-07!365;UBERON:0000349!2.06e-07!5;UBERON:0000477!7.21e-07!286 | |||
|ontology_enrichment_uberon_v019=UBERON:0002190;9.98e-20;3!UBERON:0007100;5.58e-15;25!UBERON:0002072;4.66e-12;5!UBERON:0003688;1.21e-09;6!UBERON:0002358;1.21e-09;6!UBERON:0003684;1.21e-09;6!UBERON:0001178;1.21e-09;6!UBERON:0003978;1.73e-09;3!UBERON:0000946;1.73e-09;3!UBERON:0004151;2.87e-09;3!UBERON:0001723;6.05e-09;3!UBERON:0001033;6.05e-09;3!UBERON:0000989;8.01e-08;1!UBERON:0002146;8.01e-08;1!UBERON:0008811;8.01e-08;1!UBERON:0002426;8.01e-08;1!UBERON:0003831;8.01e-08;1!UBERON:0003898;8.01e-08;1!UBERON:0004830;8.01e-08;1!UBERON:0005623;8.01e-08;1!UBERON:0003830;8.01e-08;1!UBERON:0005175;8.01e-08;1!UBERON:0001774;8.01e-08;1!UBERON:0001103;8.01e-08;1!UBERON:0002084;1.18e-07;1!UBERON:0002135;1.18e-07;1!UBERON:0002082;1.18e-07;1!UBERON:0001013;1.65e-07;14!UBERON:0002079;1.74e-07;1!UBERON:0007029;2.54e-07;1!UBERON:0001874;2.54e-07;1!UBERON:0000948;5.53e-07;22 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002190,1.06e-19,3;UBERON:0007100,8.74e-14,27;UBERON:0002072,4.84e-12,5;UBERON:0003688,1.39e-09,6;UBERON:0002358,1.39e-09,6;UBERON:0003684,1.39e-09,6;UBERON:0001178,1.39e-09,6;UBERON:0003978,2.05e-09,3;UBERON:0009751,2.05e-09,3;UBERON:0000946,2.05e-09,3;UBERON:0002523,2.05e-09,3;UBERON:0005983,2.05e-09,3;UBERON:0002165,2.05e-09,3;UBERON:0002062,2.05e-09,3;UBERON:0007280,2.05e-09,3;UBERON:0004151,2.64e-09,3;UBERON:0007023,2.82e-09,114;UBERON:0001723,5.35e-09,3;UBERON:0001033,5.35e-09,3;UBERON:0010056,5.35e-09,3;UBERON:0000989,7.26e-08,1;UBERON:0008811,7.26e-08,1;UBERON:0006258,7.26e-08,1;UBERON:0005876,7.26e-08,1;UBERON:0004874,7.26e-08,1;UBERON:0002146,8.28e-08,1;UBERON:0005623,8.28e-08,1;UBERON:0002426,8.84e-08,1;UBERON:0003831,8.84e-08,1;UBERON:0003898,8.84e-08,1;UBERON:0004830,8.84e-08,1;UBERON:0003830,8.84e-08,1;UBERON:0005175,8.84e-08,1;UBERON:0001774,8.84e-08,1;UBERON:0001103,8.84e-08,1;UBERON:0010084,8.84e-08,1;UBERON:0002084,9.44e-08,1;UBERON:0002082,9.44e-08,1;UBERON:0010226,9.44e-08,1;UBERON:0002135,1.48e-07,1;UBERON:0001013,1.68e-07,14;UBERON:0003103,1.89e-07,68;UBERON:0002079,1.91e-07,1;UBERON:0007029,2.17e-07,1;UBERON:0001874,2.98e-07,1 | |||
|phase1_expression=0.181678379270557,8.99222200342129,2.39622486963151,1.0007329835313,1.34088328328186,0,2.53299878168311,3.15859936713415,30.2975328711813,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.144846518960824,0,0,0,0,0,0.261958150995425,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,5.13217338068116,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.254094624222463,0,0,0.167516265334349,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0821271560138091,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.462145851343933,0.307007349452259,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.329294892959902,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,10.9881134453921,0,0,0,0,0,0,0.994147647766298,0.703347082052564,0,0,0,0.398495976502139,0.552567831062295,0,0,0,0,0,0,0,0.197286811273867,0,0,0.969332746095218,0.371072392647405,0,0,0,4.34999745260876,0,0,0,0,0,0,0,0.60298219312704,0,0.221158519862449,0.295547618953547,0.219385397153973,0,0,0.0769502585037971,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.134802265961354,4.01288823649394,0.937057782901357,0,0,0,0,0,0,0.063186579628488,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.225980740780532,0,0,0.253243183823515,0,0,0,0,0,0,0,0,0,0,0.135904206073614,0,0,0,0,0.136905378891993,0,0,0,3.0721064139948,4.12488763221031,0,3.39454300848285,3.43380838509257,3.57074331906996,3.76227445925667,0,0,0,0,0,0,0,0,1.49823746722733,0,0,0,0,0,0.485996453264197,0,0,0,0,0,0,2.1440859791201,3.97255182219259,0,0,0,0,0,0,0,0,0,0,0.129282956361551,0,0,0,0,0,0,0.496166021811951,0,0,0,35.3611572190158,25.3196792962927,40.1312705560135,33.7708809631099,0,0,0.122026264901963,0.500763722825999,0,0.221858103073705,0.124192805882767,0,0,0,0,0,0,0,0,0,0,0,0.754703705257725,0,0,0.302461847526478,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.414775308455192,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.321146125482298,0,0.638535436228605,0.205116364240755,0,0.691572524642179,0.484426936895553,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.405225507710368,0,0.206686796501184,0.634158101939068,0,0,4.96211178389294,0,0,0,0,0,0,0,0,0,0.135939465953663,0.263091094251396,0,0,0,1.25692471932802,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.423387050190929,0,0,0,0,0,0,0,0.410651227424988,3.4794432940146,1.94284397223656,0,0,0,0,0,0,0,0,0,0,0,0,0,0.8453114551668,0,0.0939839179798536,0.0644578879735772,0,0,0,0,0,0.917458566809082,0,0,0.543931921527318,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.310298987585686,1.91910583710883,0.23806443146374,0,0.0620747142958579,0,0.12729431655633,0,1.95945073107265,1.36893320434112,0.134704106029175,0.215166616178029,0.332660356546013,0,0,0,0,0,0.244482888365733,0.813792356631477,0.665756774185513,2.21401172950129,0 | |||
|short_description=p4@ITGA7 | |||
}} |
Revision as of 13:54, 11 January 2014
Short description: | p4@ITGA7 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_4_at_ITGA7_5end |
Coexpression cluster: | C29_mature_adipose_Adipocyte_breast_Lymphatic_vein_heart |
Association with transcript: | 0bp_to_ENST00000553276_5end |
EntrezGene: | ITGA7 |
HGNC: | 6143 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
fat cell | 2.36e-49 | 15 |
subcutaneous fat cell | 1.06e-19 | 3 |
adipocyte of omentum tissue | 1.30e-18 | 3 |
Ontology term | p-value | n |
---|---|---|
heart disease | 1.44e-13 | 2 |
vascular disease | 1.30e-07 | 1 |
ischemia | 1.30e-07 | 1 |
extrinsic cardiomyopathy | 1.30e-07 | 1 |
myocardial ischemia | 1.30e-07 | 1 |
myocardial infarction | 1.30e-07 | 1 |
cardiovascular system disease | 3.28e-07 | 4 |