FFCP PHASE1:Hg19::chr12:52585765..52585777,-: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=144501 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=27056 | |||
|TSSclassifier=strong | |||
|UniProt=Q6KB66 | |||
|association_with_transcript=6bp_to_ENST00000313234,ENST00000394815,NM_001081492,NM_182507,uc001rzx.2,uc001rzy.2_5end | |||
|description=CAGE_peak_2_at_KRT80_5end | |||
|id=chr12:52585765..52585777,- | |||
|ontology_enrichment_celltype=CL:0000066!2.72e-44!254;CL:0000076!5.03e-14!62;CL:0002076!6.79e-11!43;CL:0000223!1.42e-10!59;CL:0000077!4.62e-10!19;CL:1000497!1.99e-07!18;CL:0002518!1.99e-07!18;CL:0000082!2.09e-07!19;CL:1000507!9.81e-07!12;CL:1000494!9.81e-07!12 | |||
|ontology_enrichment_celltype_v019=CL:1000507;5.16e-12;10!CL:1000494;5.16e-12;10!CL:0000077;9.33e-12;19!CL:1000497;1.27e-10;17!CL:0002518;1.27e-10;17!CL:1000449;7.16e-09;15!CL:0002076;2.85e-07;42!CL:0000082;7.06e-07;19 | |||
|ontology_enrichment_celltype_v019_2=CL:0000066,1.78e-44,253;CL:0000076,3.11e-13,63;CL:1000507,5.19e-12,10;CL:1000494,5.19e-12,10;CL:0000077,8.99e-12,19;CL:0000223,2.09e-11,58;CL:0002076,2.39e-11,42;CL:1000497,1.27e-10,17;CL:0002518,1.27e-10,17;CL:1000449,7.19e-09,15;CL:0000082,6.37e-07,19 | |||
|ontology_enrichment_development_v019=UBERON:0008947;1.17e-10;29!UBERON:0006595;1.86e-07;86 | |||
|ontology_enrichment_disease=DOID:305!6.58e-36!106;DOID:0050687!5.18e-27!143;DOID:162!1.74e-21!235;DOID:14566!3.99e-20!239;DOID:299!1.30e-12!25;DOID:1749!7.93e-11!14;DOID:7!2.26e-07!39 | |||
|ontology_enrichment_disease_v019=DOID:299;1.50e-16;25!DOID:1749;8.71e-15;14!DOID:305;5.27e-12;106!DOID:0050687;1.82e-07;143 | |||
|ontology_enrichment_disease_v019_2=DOID:305,9.96e-47,106;DOID:0050687,1.17e-35,143;DOID:162,5.64e-31,235;DOID:14566,1.23e-29,239;DOID:299,9.20e-17,25;DOID:1749,7.78e-15,14;DOID:7,6.94e-08,39;DOID:0050686,1.66e-07,137 | |||
|ontology_enrichment_uberon=UBERON:0004119!3.68e-19!169;UBERON:0000925!3.68e-19!169;UBERON:0006595!3.68e-19!169;UBERON:0001007!1.65e-17!155;UBERON:0001555!1.65e-17!155;UBERON:0007026!1.65e-17!155;UBERON:0000077!5.64e-16!130;UBERON:0001004!8.55e-16!72;UBERON:0001041!5.43e-15!98;UBERON:0004921!1.47e-14!129;UBERON:0004185!1.47e-14!129;UBERON:0000464!2.39e-14!104;UBERON:0000466!2.98e-14!126;UBERON:0000065!3.85e-12!53;UBERON:0000072!8.98e-12!46;UBERON:0008947!2.30e-11!38;UBERON:0003258!2.30e-11!38;UBERON:0001048!3.45e-11!168;UBERON:0005177!4.56e-11!107;UBERON:0000058!1.16e-10!26;UBERON:0003104!1.25e-10!238;UBERON:0009142!1.25e-10!238;UBERON:0005911!7.55e-10!82;UBERON:0002553!1.71e-09!70;UBERON:0000481!2.36e-09!347;UBERON:0009569!3.70e-09!113;UBERON:0000063!3.63e-08!97;UBERON:0000475!4.48e-08!365;UBERON:0001008!5.33e-08!45;UBERON:0003064!5.51e-08!37;UBERON:0000161!7.42e-08!35;UBERON:0006554!9.69e-08!44;UBERON:0000062!1.88e-07!511;UBERON:0004802!2.09e-07!19;UBERON:0000115!2.09e-07!19;UBERON:0002048!2.69e-07!22;UBERON:0000117!2.69e-07!22;UBERON:0000171!2.69e-07!22;UBERON:0000170!2.69e-07!22;UBERON:0005597!2.69e-07!22;UBERON:0000118!2.69e-07!22;UBERON:0000064!3.54e-07!219;UBERON:0003886!4.04e-07!63;UBERON:0000166!4.57e-07!21;UBERON:0001444!4.80e-07!48;UBERON:0002100!5.22e-07!216;UBERON:0000080!5.71e-07!18;UBERON:0002120!5.71e-07!18;UBERON:0004875!5.71e-07!18;UBERON:0005721!5.71e-07!18;UBERON:0005754!5.71e-07!18;UBERON:0007297!5.71e-07!18;UBERON:0005153!6.13e-07!37;UBERON:0004807!7.39e-07!28;UBERON:0009773!9.81e-07!12;UBERON:0001231!9.81e-07!12;UBERON:0004810!9.81e-07!12 | |||
|ontology_enrichment_uberon_v019=UBERON:0004211;5.16e-12;10!UBERON:0009773;5.16e-12;10!UBERON:0001231;5.16e-12;10!UBERON:0004810;5.16e-12;10!UBERON:0000072;5.01e-09;37!UBERON:0006555;7.16e-09;15!UBERON:0004819;7.16e-09;15!UBERON:0001285;7.16e-09;15!UBERON:0007684;7.16e-09;15!UBERON:0001737;3.14e-08;9!UBERON:0001557;3.14e-08;9!UBERON:0001004;2.32e-07;65!UBERON:0004807;2.41e-07;22!UBERON:0002113;2.54e-07;24!UBERON:0011143;2.54e-07;24!UBERON:0004802;7.06e-07;19!UBERON:0000115;7.06e-07;19!UBERON:0001851;7.51e-07;15 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0005177,5.32e-13,101;UBERON:0001041,1.61e-12,87;UBERON:0004810,5.19e-12,10;UBERON:0001004,5.64e-12,74;UBERON:0000072,2.27e-11,47;UBERON:0001007,2.52e-11,145;UBERON:0001555,2.52e-11,145;UBERON:0007026,2.52e-11,145;UBERON:0004921,8.83e-11,118;UBERON:0008947,1.08e-10,38;UBERON:0003258,1.08e-10,38;UBERON:0004119,1.71e-10,160;UBERON:0000925,1.71e-10,160;UBERON:0006595,1.71e-10,160;UBERON:0000065,1.17e-09,54;UBERON:0006555,1.69e-09,16;UBERON:0004819,1.69e-09,16;UBERON:0004211,7.19e-09,15;UBERON:0009773,7.19e-09,15;UBERON:0001231,7.19e-09,15;UBERON:0001285,7.19e-09,15;UBERON:0007684,7.19e-09,15;UBERON:0004208,7.19e-09,15;UBERON:0009569,1.29e-08,112;UBERON:0001737,3.08e-08,9;UBERON:0002113,2.28e-07,26;UBERON:0003918,2.28e-07,26;UBERON:0011143,2.28e-07,26;UBERON:0005095,2.28e-07,26;UBERON:0007687,2.28e-07,26;UBERON:0001557,3.97e-07,19;UBERON:0004802,6.37e-07,19;UBERON:0000115,6.37e-07,19;UBERON:0001851,7.67e-07,15 | |||
|phase1_expression=0,0,0,1.0007329835313,0,0,0,0,0,22.6075221581388,62.1043039495461,0.218441372130172,0,0,0,0,0,0,0,0.123121058076788,0.408001382488506,0.626909442956176,0.286235987131057,3.14811177667634,0.376627918784408,0,0,0,0,0,0,2.75826367343678,0.90361775633475,1.47901604066715,0,0,0,0,0,0,0,0,0,0,0,0,0,0.411167888021826,0,0,0,0,0,0,0,0,0.272906150057846,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.51255707462509,2.4390233720882,1.58102614247627,0.261958150995425,1.09288586487763,1.85392221392215,0,0,0,0,0,0,0,0,0,0,0,0.275118041940067,0,0,0,0,0.402829317109147,0,0,0,0.81014194788176,0.357198913136319,0.22452937262617,0.112611480483322,1.53316637465883,0,0.366403487860815,0,0,0,0,0,0,0,0,1.12135520028461,0,5.67335361359468,0,0.134710672069688,0,0.151357427644931,0,0.234321431833797,0,0,0,0,0,0,0,0.122834317311768,0.103325781175765,0,0,0,0,0,0.125118519871964,0,0,0.30648779579902,0,0,0,0,0,0,0,0,0.37223371266318,0,0,0,0,0,0,0.10075209822764,0,1.15956511897978,1.09098448236334,0.286804595389004,0,0.132529768321485,0,0,0,0,1.56449532329816,0,0,0,0,4.73227200159376,3.87744787179634,2.41011029883482,4.74264082749294,5.66486554640256,4.03360052488864,2.15730093056263,2.35465758150415,2.69323009862473,0,0,1.2347220339942,0,0,0,0,0,2.09080345523293,0.343135620597051,1.09750285408626,5.62008766288098,0.603173834469785,0,0,0,1.44331342025273,0.811512834825538,0.469634776943287,0,0,0,30.0277671224525,32.6224741596052,0,0,0,0,0.16798212819886,0.567100388969546,0.716468181622786,0,0,0,0,0,0.144119953416961,0,0,0,0,0,0,0,0,0,0,0.07333828582095,0,0,0,0,0,0,0,0,0.142977993658148,0,0,0,0,0,0.301439377059586,0.871533458600294,1.29964888536674,0,0,0,0,0,1.42636905040718,0.579125226670317,0.205476322550383,0.358121926479791,0.224170287987055,0,0,0,0.254094624222463,0,0,0,0,0,0,0,0,0,0,0,0,0.157702415033935,0,0.300946099727719,0,0,0,0.184369168541703,0,0,2.05886054286514,0.206768026122887,0,0,0.303127571446259,0,0.30239029332968,0,0,0,0,0.511707249066704,0.160853921143607,0,0,0,0,0,0,0,1.60405176242628,10.4051517497563,0.229628896329213,0,0,12.1823895485001,3.08061348417659,18.0400446910677,27.7664526841195,10.5551628892876,0,0,0.431831832204279,0,7.85744668877173,9.53210570324221,9.17554582962138,9.97291210714469,10.7459882266646,0,0,2.56450125116389,14.4326444107871,22.1257308371726,1.75169719801128,3.02179233900533,5.85817449436175,0.574265537996172,3.25030123018261,0,0.290012154876366,0.462145851343933,0.15350367472613,0.551346289938122,0.107420244868274,0.290033387828457,1.02271952899321,0.890320356467374,0,0.384380134730212,0.382838137483752,2.2254711788221,0,0,0,0,0,0,0,0,0,0.316379424718726,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.551365343546124,0,0,0,0,0,0.30982349809975,0,0,0,0,0,0,0,0,0,0.962221127255121,1.34060455107157,0,1.88287601553558,0.86101074534246,0,0.443430153536676,0.229723400206959,0,0,0,0,0,0,0,0,0,0,2.20536194382929,0,0,0,0,0,0,0,0,0,0,0.156679895773023,0,0,0,0,0,0,0,0,0,0,1.39203086947621,0,0,0,0,0.935702702041099,0,0,10.3642347378055,5.39858678932185,3.10367830158997,0.890894042497916,0.307160702099232,0,0,0.779160935160341,0.329607748453519,2.74463030566391,0.398495976502139,0,1.0077309914171,27.3057382280753,0,0,21.1190625196218,32.2238114416096,0,0.197286811273867,0,0,0,0,0,9.89625492123886,2.97363999987065,1.44999915086959,3.41380344856499,13.9839507661021,10.6374456795571,0,0,0,0,0,0,0,0,0,26.1452312445576,51.7262091273618,1.07730361905316,5.58316073650306,0.23056390438806,2.87224462111271,0.108647371922008,0.31900115973192,0.641183153813036,0,0,0,0,0,0,0,0,0,3.79796516150449,10.7733653385037,0,0,0,0.0884575645033392,0,0,0,0,0,0,0,0,15.0661756577709,2.67058417487502,0.789168805698781,0,0,0,0,0,4.6525771089503,1.323967823502,5.96472544973728,3.58417289318877,1.13843818411917,0,1.73559738335131,16.5607151630298,5.48473001456536,2.27144668714639,0.859930162358083,10.3529274479321,11.7673800508759,9.85385484638511,2.32773639572207,0,0.451961481561065,5.07055121192978,2.18586072873289,0,12.1241857295578,2.56508224804908,0.640358984218058,18.382484081556,4.7549837660855,0,0,11.9565482330164,0.248505071130865,16.2628883885589,19.8420140867476,22.1758034182146,1.22397861163586,0,0,0,0,8.16554338697919,0,0,0,0,0.599037001496973,0,0,0,0,0,0,0.0824158583811665,0.26961417541674,8.16948096572415,0.0846733320657845,0,0,0,0,0,0.449947783103001,2.32140586367385,0,5.03152031398899,1.02447419488958,0.786818822024972,0.105600336519406,0.896436696664224,9.40384466865282,0,0,0.76280561296425,0,0,0,9.578415324999,0,0,0.113312091520126,0,0,0,0,7.69890770479482,4.9337051562167,0.533937062838473,0.78602152549833,0,0,0,0,10.2134601243229,0,0,0,0,9.58029987126429,0,0,0,0,0,0,0,3.49945142293898,0,0,0.705797459094515,0,0,0,0,0,0,0,0,0,0,0,0,0.477890301491107,0,0.155262956876259,0,0,0,0.150257608997218,0,0.813741466409323,0,1.07410557042488,0,0,12.0008329398946,0,0,1.26184898228651,11.9424294852528,4.2888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| |||
|short_description=p2@KRT80 | |||
}} |
Revision as of 13:33, 11 January 2014
Short description: | p2@KRT80 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_2_at_KRT80_5end |
Coexpression cluster: | NA |
Association with transcript: | 6bp_to_ENST00000313234, ENST00000394815, NM_001081492, NM_182507, uc001rzx.2, uc001rzy.2_5end |
EntrezGene: | KRT80 |
HGNC: | 27056 |
UniProt: | Q6KB66 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
epithelial cell | 1.78e-44 | 253 |
squamous epithelial cell | 3.11e-13 | 63 |
kidney tubule cell | 5.19e-12 | 10 |
nephron tubule epithelial cell | 5.19e-12 | 10 |
mesothelial cell | 8.99e-12 | 19 |
endodermal cell | 2.09e-11 | 58 |
endo-epithelial cell | 2.39e-11 | 42 |
kidney cell | 1.27e-10 | 17 |
kidney epithelial cell | 1.27e-10 | 17 |
epithelial cell of nephron | 7.19e-09 | 15 |
epithelial cell of lung | 6.37e-07 | 19 |
Ontology term | p-value | n |
---|---|---|
trunk region element | 5.32e-13 | 101 |
foregut | 1.61e-12 | 87 |
nephron tubule epithelium | 5.19e-12 | 10 |
respiratory system | 5.64e-12 | 74 |
segment of respiratory tract | 2.27e-11 | 47 |
digestive system | 2.52e-11 | 145 |
digestive tract | 2.52e-11 | 145 |
primitive gut | 2.52e-11 | 145 |
subdivision of digestive tract | 8.83e-11 | 118 |
respiratory primordium | 1.08e-10 | 38 |
endoderm of foregut | 1.08e-10 | 38 |
endoderm-derived structure | 1.71e-10 | 160 |
endoderm | 1.71e-10 | 160 |
presumptive endoderm | 1.71e-10 | 160 |
respiratory tract | 1.17e-09 | 54 |
excretory tube | 1.69e-09 | 16 |
kidney epithelium | 1.69e-09 | 16 |
nephron epithelium | 7.19e-09 | 15 |
renal tubule | 7.19e-09 | 15 |
nephron tubule | 7.19e-09 | 15 |
nephron | 7.19e-09 | 15 |
uriniferous tubule | 7.19e-09 | 15 |
nephrogenic mesenchyme | 7.19e-09 | 15 |
subdivision of trunk | 1.29e-08 | 112 |
larynx | 3.08e-08 | 9 |
kidney | 2.28e-07 | 26 |
kidney mesenchyme | 2.28e-07 | 26 |
upper urinary tract | 2.28e-07 | 26 |
kidney rudiment | 2.28e-07 | 26 |
kidney field | 2.28e-07 | 26 |
upper respiratory tract | 3.97e-07 | 19 |
respiratory tract epithelium | 6.37e-07 | 19 |
lung epithelium | 6.37e-07 | 19 |
cortex | 7.67e-07 | 15 |
Ontology term | p-value | n |
---|---|---|
carcinoma | 9.96e-47 | 106 |
cell type cancer | 1.17e-35 | 143 |
cancer | 5.64e-31 | 235 |
disease of cellular proliferation | 1.23e-29 | 239 |
adenocarcinoma | 9.20e-17 | 25 |
squamous cell carcinoma | 7.78e-15 | 14 |
disease of anatomical entity | 6.94e-08 | 39 |
organ system cancer | 1.66e-07 | 137 |