FFCP PHASE1:Hg19::chr12:32552586..32552593,+: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
Line 1: | Line 1: | ||
{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=121512 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=19125 | |||
|TSSclassifier=strong | |||
|UniProt=F8VWL3 | |||
|association_with_transcript=123bp_to_ENST00000534526_5end | |||
|coexpression_cluster_id=C128 | |||
|description=CAGE_peak_18_at_FGD4_5end | |||
|id=chr12:32552586..32552593,+ | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019=CL:0000039;3.16e-29;7!CL:0000586;3.16e-29;7!CL:0002541;9.45e-18;3 | |||
|ontology_enrichment_celltype_v019_2=CL:0000039,2.74e-29,7;CL:0000586,2.74e-29,7;CL:0002541,1.12e-17,3 | |||
|ontology_enrichment_development_v019=UBERON:0006298;3.99e-50;1!UBERON:0009117;7.72e-21;10!UBERON:0005564;7.72e-21;10 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019=DOID:3095;4.33e-10;22!DOID:2994;4.33e-10;22 | |||
|ontology_enrichment_disease_v019_2=DOID:3095,4.14e-10,22;DOID:2994,4.14e-10,22 | |||
|ontology_enrichment_uberon=UBERON:0007023!8.52e-11!115;UBERON:0000473!5.94e-08!8;UBERON:0003135!1.64e-07!11;UBERON:0003075!2.45e-07!86;UBERON:0007284!2.45e-07!86 | |||
|ontology_enrichment_uberon_v019=UBERON:0001736;3.99e-50;1!UBERON:0001829;7.14e-26;2!UBERON:0000473;9.81e-26;8!UBERON:0003135;4.69e-19;11!UBERON:0003124;9.45e-18;3!UBERON:0000920;9.45e-18;3!UBERON:0000991;1.61e-10;21!UBERON:0003101;4.33e-10;22!UBERON:0000079;4.33e-10;22!UBERON:0001044;1.44e-09;6!UBERON:0003293;1.44e-09;6!UBERON:0003294;1.44e-09;6!UBERON:0010047;1.44e-09;6!UBERON:0003408;1.44e-09;6!UBERON:0000167;1.44e-09;6!UBERON:0002553;2.98e-08;52 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001736,3.99e-50,1;UBERON:0006298,3.99e-50,1;UBERON:0001829,7.14e-26,2;UBERON:0000473,8.65e-26,8;UBERON:0003135,4.28e-19,11;UBERON:0000920,1.12e-17,3;UBERON:0000991,1.53e-10,21;UBERON:0009196,1.53e-10,21;UBERON:0009117,1.53e-10,21;UBERON:0005564,1.53e-10,21;UBERON:0004176,4.14e-10,22;UBERON:0003101,4.14e-10,22;UBERON:0000079,4.14e-10,22;UBERON:0001044,1.44e-09,6;UBERON:0003293,1.44e-09,6;UBERON:0003294,1.44e-09,6;UBERON:0010047,1.44e-09,6;UBERON:0000167,1.44e-09,6;UBERON:0003124,2.35e-08,7;UBERON:0002553,3.25e-08,61 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.331397375727916,0,0,0,0,0,0,0,0,0,0,0,0,0,0.393364276848904,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.521482918420201,0,0,0,0,0,0,0,0,0.150176892841506,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.087834785693126,0.130979075497713,0,0,0,0,0,0,0,0,0,0,0,0,0.419499436209906,0.550236083880135,0.208994966536811,0,0.35576626268671,0.33472061276467,0,0,0,0,0,0,0.22452937262617,0.225222960966644,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.163461903113459,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.113432183160021,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.365921118388786,0.265059536642971,0.116193942869518,0.10366105501537,0,0.36497735907583,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.590789906681404,0,0,0.171567810298526,0.219500570817251,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.290633938513962,0,0,0,0,0,0,0.063497894292169,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.303127571446259,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.105551628892876,0,0,0,0,0,0,0,0,0,0,0,0,0.328014645699706,0.650756789328606,0.206082023295445,0,0,0.574265537996172,0,0,0,0,0,0,0,0,0,0,0,0,0.255225424989168,0.2023155617111,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.136499911407986,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0941438007767792,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.191505370132367,0,0,0,0,0,0,0.169291777801603,0,0,0,0,0,0,0,0,0,0,0,0,0,0.18714054040822,0.293016358543788,0,0,0,0.23874448473769,0,0,0,0.422008249231538,0,0,0,0,0,0,0,0,0,0.0898683511473268,0,0,0,0,0,0,0.0927680981618513,0,0,0.0874599999961957,0,0,0,0,0,0,0,0.885741385813839,0,0,0,0,0,0,0.139423744278603,0.0769502585037971,0,0,0.0897576444097721,0,0,0.0915975934018623,1.06606955203727,0,0,0.166211681900156,0,0,0,0,0,0,0,0,0,0,0.442287822516696,0,0,0,0,0.067401132980677,0,0,0,0.19566461893209,0,0.789168805698781,0,0,0,0.150323419414493,0,0,0,0,0,0.284609546029793,0,0,0.0979923974143777,0,0,0,0,0.0730893170861856,0,0.0969890164884194,0,0,0,0,0.126621591911757,0,0,0.426905989478705,0,0.288180834308212,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.229160424011684,0,0,0,0,0.134366944973453,0,0,0,0,0,0,0,0,0,0.160753148465019,0.962776056180637,0.83088067605837,0,0,0,0,0.236417121897595,0.157363764404994,0,0,0.191915197319445,0,0,0,0,0,0,0,0,0,0,0,0,0.258565912723101,0.13223260174269,0.171086837884329,0.704815022316672,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.250381861413,0,0.110929051536852,0.310482014706917,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.192619830407303,0,0.260994291965212,0,0.463044948647668,0,0,0,0,0,0,0,0.76872455576384,0,0,0.138258436151731,0,0,0,0,0.245772908753719,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0788617450012534,0,0,0,0,0,0,0.41023272848151,0,0.0691572524642179,0,0,0.196295437002051,0,0,0.115525666150338,0,0,0,0.0752103283492573,0.20170506870352,0,0,0.163771917510097,0,0.202612753855184,0,0.620060389503552,0.0634158101939068,0,0,0,0,0.127762427639595,0,0,0,0.227662191351298,0.266107110487916,0,0,0.475788130837822,0.0657727735628491,0,0,0.078493092850514,0.157115589916002,0,0,0.215927591218621,0,0.214429632529969,0,0.116241425368125,0,0,0,0.17071847709395,0,0.430227358820278,0,0,0.423387050190929,0,0,0,0.111855431797792,0.294450700845729,0.487671699929078,0,0,0,0,0.233939463462106,0,0,0.11294608203896,0,0,0.617393264863557,0,0,0,0.235676547101626,0,0,0.4226557275834,0,0,0,0,0,0,0,0,1.37618785021362,0,0,0.0679914901909147,0,0,0,0,0,0.126166424835079,0.218531143927391,0.126698501011437,0.917899467677836,4.54269588951453,1.47031839255752,0.50141507858475,0.0757786982182394,0,0,0,0,0,0,0,0.112131862580613,0,0,0.217716747896961,0,0,0.0717222053926763,0,0.0814032686109745,0,0,0,0,0,0.813792356631477,0,0,0 | |||
|short_description=p18@FGD4 | |||
}} |
Revision as of 12:55, 11 January 2014
Short description: | p18@FGD4 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_18_at_FGD4_5end |
Coexpression cluster: | C128_testicular_choriocarcinoma_H9_teratocarcinoma_pancreatic_iPS_HES3GFP |
Association with transcript: | 123bp_to_ENST00000534526_5end |
EntrezGene: | FGD4 |
HGNC: | 19125 |
UniProt: | F8VWL3 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
germ line cell | 2.74e-29 | 7 |
germ cell | 2.74e-29 | 7 |
chorionic membrane mesenchymal stem cell | 1.12e-17 | 3 |
Ontology term | p-value | n |
---|---|---|
submandibular gland | 3.99e-50 | 1 |
submandibular gland primordium | 3.99e-50 | 1 |
major salivary gland | 7.14e-26 | 2 |
testis | 8.65e-26 | 8 |
male reproductive organ | 4.28e-19 | 11 |
egg chorion | 1.12e-17 | 3 |
gonad | 1.53e-10 | 21 |
indifferent external genitalia | 1.53e-10 | 21 |
indifferent gonad | 1.53e-10 | 21 |
gonad primordium | 1.53e-10 | 21 |
external genitalia | 4.14e-10 | 22 |
male organism | 4.14e-10 | 22 |
male reproductive system | 4.14e-10 | 22 |
saliva-secreting gland | 1.44e-09 | 6 |
gland of oral region | 1.44e-09 | 6 |
gland of foregut | 1.44e-09 | 6 |
oral gland | 1.44e-09 | 6 |
oral cavity | 1.44e-09 | 6 |
chorion | 2.35e-08 | 7 |
anatomical cavity | 3.25e-08 | 61 |
Ontology term | p-value | n |
---|---|---|
germ cell and embryonal cancer | 4.14e-10 | 22 |
germ cell cancer | 4.14e-10 | 22 |