FFCP PHASE1:Hg19::chr12:133187039..133187052,-: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=100507055 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_ncRNA | |||
|HGNC= | |||
|TSSclassifier=strong | |||
|UniProt= | |||
|association_with_transcript=-2bp_to_ENST00000536100,NM_001195520_5end | |||
|coexpression_cluster_id=C39 | |||
|description=CAGE_peak_2_at_LOC100507055_5end | |||
|id=chr12:133187039..133187052,- | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019=CL:0002567;1.47e-09;3 | |||
|ontology_enrichment_celltype_v019_2=CL:0002567,1.67e-09,3 | |||
|ontology_enrichment_development_v019=UBERON:0005425;6.72e-26;1!UBERON:0007297;6.43e-14;2!UBERON:0003056;1.47e-09;3 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0006947!3.43e-09!3;UBERON:0004054!3.43e-09!3;UBERON:0005904!5.89e-07!4;UBERON:0007023!7.02e-07!115 | |||
|ontology_enrichment_uberon_v019=UBERON:0006947;5.06e-34;3!UBERON:0004054;5.06e-34;3!UBERON:0001301;2.15e-26;1!UBERON:0001000;6.72e-26;1!UBERON:0000941;6.72e-26;1!UBERON:0001785;6.72e-26;1!UBERON:0002464;6.72e-26;1!UBERON:0004904;6.72e-26;1!UBERON:0001021;6.72e-26;1!UBERON:0005352;6.72e-26;1!UBERON:0005904;8.13e-26;4!UBERON:0003714;1.14e-13;2!UBERON:0005162;1.14e-13;2!UBERON:0000122;1.14e-13;2!UBERON:0000058;5.83e-11;10!UBERON:0003135;4.73e-10;11 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0006947,3.33e-34,3;UBERON:0004054,3.33e-34,3;UBERON:0001301,2.16e-26,1;UBERON:0001000,3.58e-26,1;UBERON:0005352,3.58e-26,1;UBERON:0000941,4.61e-26,1;UBERON:0001785,4.61e-26,1;UBERON:0002464,4.61e-26,1;UBERON:0004904,4.61e-26,1;UBERON:0001021,4.61e-26,1;UBERON:0003902,4.61e-26,1;UBERON:0005425,4.61e-26,1;UBERON:0005904,5.94e-26,4;UBERON:0003714,9.40e-14,2;UBERON:0005162,9.40e-14,2;UBERON:0000122,9.40e-14,2;UBERON:0003135,4.22e-10,11;UBERON:0001781,1.59e-07,4 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.286235987131057,0,0.125542639594803,0,0,0,0,0,0,0,0,0,0,0,0.293600439334847,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.378139268656271,0,0.087834785693126,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.112611480483322,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.163461903113459,0,0,0,0,0,0.149448680551801,0,0,0,0.204154171254893,0,0,0,0,0,0,0,0,0,0.438977620880838,0,0,0,0,0,0,0.300091096084402,0,0,0,0.337552664482532,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.4115740113314,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.231860809950154,0,0,0,0,0,0,0.246217006087397,0,0,0,0,0,0,0,0,0,0.264145302039678,0,0,0.50496973370552,0.444485260045183,0,1.17217447210047,0,0,0.300343057843917,0,0,0,0,0,3.57656445851882,0,0,1.04007436911366,0,0,0.266422179016099,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.12269149171914,0,0,0,0,0,0,0,0,0,0,0,0,0.195801157462741,0.686286847621712,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.116210378459959,0,0,0,0,0,0.131124414959424,0,0,0,0,0,0,0,0,0,0.270946437543853,0,0,0,0,0,0,0,0,0,0,0.183138929636687,0,0,0,0,0,0,0,0,0,0,0.0852266274161009,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.117812402345686,0,0,0,0.975267478179181,0,0,0,0,0,0,0,0,0,0,0.202910376962704,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.245040215981032,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.223676107892416,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.276283915531148,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.156980256395025,0,0,0,0,0,0,0,0,0,0.432777279484182,0,0,0,0,0,0,0,0,0,0,0,0,1.97292201424695,1.20990716048664,0,0.126373159256976,0,0,0,0,0,0,0,0,0,0,0,13.6286801228784,0,0,0,0,0.0969890164884194,0,0,0,0,0,0,0,0,0.39961921916426,0,0,0,0,0,0,0.135904206073614,0.313808538937,0.611989305817931,0,0.600420288709789,0,0,0,0,0,0,0,0,0,0,0.0671834724867263,0,0,0,0,0,0,0,0.795229689809303,0.272406812223151,0,0,0,0,0,0.242998226632099,0,0,0.0524545881349981,0,0,0,0,0,0,0,0,0,0,0,0.170388021785422,0,0,0,0,0,0,0,0.533937062838473,0.157204305099666,0.828478110694391,0,0,0,0,0,0.2506898940227,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.214821114084977,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.431299245586727,0,0,0,0,0.743614585554013,0,0.318004350653419,0,0,0,0.918736432059601,0,0,0,0,0,0,0.161475645631851,1.42769420259154,0,0,0,0,0,0,1.39241355481392,0,0,0,0,0,0,0,0,0,0.0634158101939068,0,0,0,0,0,0,0,0,0.227662191351298,0,0,0,0,0,0,0,0.078493092850514,0,0,0,0,0,0.357382720883282,0,0,0,0.801711364730253,0,0,0,0,0,0,0.423387050190929,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0644578879735772,0,0,0,0,0,0,0.286679166302903,0.157771562193185,0.0679914901909147,0,0.5290268405154,0,0,0,0,0,0,0,0,0,0,0.378893491091197,0,0,0.103432995861895,0.213233981900981,0,0,0.0620747142958579,0,0,0,0,0,0.202056159043763,0,0,0,0,0,0,0,0.122241444182866,0,0,0,0 | |||
|short_description=p2@LOC100507055 | |||
}} |
Revision as of 16:48, 11 January 2014
Short description: | p2@LOC100507055 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_2_at_LOC100507055_5end |
Coexpression cluster: | C39_epididymis_ductus_seminal_testis_acute_thyroid_CD133 |
Association with transcript: | -2bp_to_ENST00000536100, NM_001195520_5end |
EntrezGene: | LOC100507055 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
light melanocyte | 1.67e-09 | 3 |
Ontology term | p-value | n |
---|---|---|
male genital duct | 3.33e-34 | 3 |
internal male genitalia | 3.33e-34 | 3 |
epididymis | 2.16e-26 | 1 |
vas deferens | 3.58e-26 | 1 |
spermatic cord | 3.58e-26 | 1 |
cranial nerve II | 4.61e-26 | 1 |
cranial nerve | 4.61e-26 | 1 |
nerve trunk | 4.61e-26 | 1 |
nerve connecting eye with brain | 4.61e-26 | 1 |
nerve | 4.61e-26 | 1 |
retinal neural layer | 4.61e-26 | 1 |
presumptive neural retina | 4.61e-26 | 1 |
duct of male reproductive system | 5.94e-26 | 4 |
neural tissue | 9.40e-14 | 2 |
multi cell component structure | 9.40e-14 | 2 |
neuron projection bundle | 9.40e-14 | 2 |
male reproductive organ | 4.22e-10 | 11 |
layer of retina | 1.59e-07 | 4 |