FFCP PHASE1:Hg19::chr12:116645578..116645582,-: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport= | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |||
|TSSclassifier=not | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|coexpression_cluster_id=C192 | |||
|description=CAGE_peak_at_chr12:116645578..116645582,- | |||
|id=chr12:116645578..116645582,- | |||
|ontology_enrichment_celltype=CL:0002057!3.35e-18!42;CL:0000860!1.06e-16!45;CL:0000738!7.83e-15!140;CL:0002087!1.07e-13!119;CL:0002009!1.12e-13!65;CL:0000037!1.46e-13!172;CL:0000566!1.46e-13!172;CL:0002194!6.57e-13!63;CL:0000576!6.57e-13!63;CL:0000040!6.57e-13!63;CL:0000559!6.57e-13!63;CL:0000766!1.31e-12!76;CL:0000988!1.73e-12!182;CL:0000557!6.79e-12!71;CL:0002032!1.64e-11!165;CL:0000837!1.64e-11!165;CL:0002031!3.13e-11!124;CL:0000839!9.14e-11!70;CL:0000763!1.73e-10!112;CL:0000049!1.73e-10!112;CL:0002393!2.80e-07!9;CL:0002397!2.80e-07!9 | |||
|ontology_enrichment_celltype_v019=CL:0002393;1.43e-09;6!CL:0002397;1.43e-09;6!CL:0000775;7.05e-09;3!CL:0000226;1.66e-08;3!CL:0000842;1.66e-08;3!CL:0000094;3.28e-07;8 | |||
|ontology_enrichment_celltype_v019_2=CL:0000860,1.17e-11,42;CL:0002057,1.17e-11,42;CL:0000738,9.06e-11,136;CL:0002393,9.41e-11,9;CL:0002397,9.41e-11,9;CL:0000766,1.45e-10,72;CL:0000037,3.43e-10,168;CL:0000473,5.60e-10,48;CL:0000234,5.60e-10,48;CL:0000763,6.30e-10,108;CL:0000049,6.30e-10,108;CL:0000988,1.88e-09,177;CL:0002009,6.24e-09,61;CL:0000775,6.42e-09,3;CL:0002032,1.69e-08,161;CL:0000837,1.69e-08,161;CL:0000226,2.33e-08,3;CL:0000842,2.33e-08,3;CL:0000557,5.77e-08,67;CL:0002087,1.01e-07,115;CL:0002194,1.25e-07,59;CL:0000576,1.25e-07,59;CL:0000040,1.25e-07,59;CL:0000559,1.25e-07,59;CL:0000094,3.06e-07,8 | |||
|ontology_enrichment_development_v019=CL:0002057;7.73e-10;42!UBERON:0000358;3.46e-07;1!UBERON:0005754;3.46e-07;1!UBERON:0005425;8.23e-07;1 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002390!5.84e-14!102;UBERON:0003061!5.84e-14!102;UBERON:0002193!3.63e-12!112;UBERON:0002371!1.03e-11!80;UBERON:0001474!4.97e-11!86;UBERON:0004765!1.52e-08!101;UBERON:0001434!1.52e-08!101;UBERON:0007023!2.89e-07!115;UBERON:0002405!9.23e-07!115 | |||
|ontology_enrichment_uberon_v019=UBERON:0002134;2.65e-07;1!UBERON:0005208;2.65e-07;1!UBERON:0004145;2.65e-07;1!UBERON:0005946;2.65e-07;1!UBERON:0005965;2.65e-07;1!UBERON:0002078;2.65e-07;1!UBERON:0000998;3.46e-07;1!UBERON:0006868;3.46e-07;1!UBERON:0000941;8.23e-07;1!UBERON:0001785;8.23e-07;1!UBERON:0002464;8.23e-07;1!UBERON:0004904;8.23e-07;1!UBERON:0001021;8.23e-07;1 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002134,2.66e-07,1;UBERON:0005208,2.66e-07,1;UBERON:0005946,2.66e-07,1;UBERON:0005965,2.66e-07,1;UBERON:0002078,2.66e-07,1;UBERON:0000998,3.17e-07,1;UBERON:0006868,3.17e-07,1;UBERON:0002390,5.48e-07,98;UBERON:0003061,5.48e-07,98;UBERON:0000941,7.15e-07,1;UBERON:0001785,7.15e-07,1;UBERON:0002464,7.15e-07,1;UBERON:0004904,7.15e-07,1;UBERON:0001021,7.15e-07,1;UBERON:0003902,7.15e-07,1;UBERON:0005425,7.15e-07,1;UBERON:0002371,8.41e-07,76 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.730310090387373,0,0,0,0,0,0.410623275218653,0.251085279189606,0,0,0,0,0,0.154816123316076,0,0,0,0.232401601740905,0.568676929949686,0.880801318004542,7.20194031091441,4.61252229181326,3.03815219002193,0,0.32389366601898,0.257575567634187,0.726991193897824,0.755751887377619,0.485168122375632,0.464858073811369,0.822335776043652,1.85823822537062,0.28769239232215,1.0246428261164,0.709446689665756,0.344745680736619,0.645484683583826,0,0.376484679085209,0.545812300115692,0,0.918251677112708,0.320929027076094,0.639337125799041,0.329851300186716,0.797854630486527,0,1.7412554317715,1.70215567407342,0,0.502497330513487,1.0429658368404,0.65156653411535,1.21079900526674,0.368277635987565,0.316462387440884,0.845021145247767,0.425208599930087,0.628975936525128,0.44931452458598,0.450530678524519,0.48217676009124,2.28010194992999,0.79566670879636,0.365328307529268,0,0.546138611262131,0,0.853460445133014,0.400395987036012,0,0,0,0,1.76171156811282,1.52909291250092,0,0,0.263384084775077,0.590129310341499,0.393010762749165,0.411202997999018,0,0,0.473447805734733,0,0,0.589211814949674,0.443067789167242,0,0.896639238079726,0.520237390239513,1.47994114143309,0.276350017785848,0,0,0,0,0,0.383220493601921,0.68725489096526,0,0.318565414324097,0.651083453856419,0,0,0,0,0,0,0.201606743224732,0.534880391567015,0.289648807765598,0,0,0,0,0,0,0,0,0,0.665188192387692,0.263504357079378,0.196468613246569,0,0,0.324547393654683,0,0.132957960518865,0.238490624305342,0.571994910780128,0,0,0,0,0,0,0,0,0,0.35576626268671,0,0,0,0,0,0,0,0,0,0,0,0,0,3.87780264148325,0,0.496971951695318,0,0.132409180813219,0,0,0,0,0,0,0.134710672069688,0,0,0,0,0,0,0,0,0,0,0.816616685019573,0.491337269247072,0.103325781175765,0,0.247266929278557,0,0,0.168336113954066,0.125118519871964,0,0,0,0.150238058906597,0,0.358779271377724,0,0.211931901159562,0,0.206105058476878,0.257640540045629,0.37223371266318,0.506328996723799,0,0,0.276149695926898,0,0.355009592516614,0,0,0.193260853163297,0,0.286804595389004,0,0,0,0.10366105501537,0.252320850875628,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.441463099414651,0,0,0,0,0,0,0,0,0,0.115930404975077,0,0,0,0.190254152234598,0,0,0.738651018262192,0.468008530278475,0.297262324577456,0,0,0,0,0,0,0,0,0,0.144119953416961,0.12624243342638,0,0,0,0,0.102827492703324,0,0.285826432630578,0,0,0,0,0,0,0,0,0,0,0.266422179016099,0.142977993658148,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.205476322550383,0,0.112085143993527,0.591092280605782,0.862510299438069,1.02674429023799,0,1.30139853857622,0,0.167516265334349,0,2.99602809578873,5.9832291840805,0.828831026872071,0,0,0,0.207970861530807,0.356857977594324,0,0,0,0,0,0,0,0.173767228936166,0,0,1.03384013061444,2.5885704098234,0.853820462427555,0,0,0,0,0.306923946576125,0,0.128139149255701,0,0,0,0.154209693802656,0,0.0821271560138091,0,0.116210378459959,0,0,0.0920809889358963,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.515205058238611,0.183138929636687,0.247528499761764,0,0.650060246036521,0,0.096670718292122,0.462145851343933,0.307007349452259,0.137836572484531,0.429680979473094,0.435050081742686,0.0852266274161009,0.267096106940212,0.165284915360978,0,0.638063562472921,0.10115778085555,0,0,0.6970372701606,0,0,0,0,0,0.372158369359667,0,0.38126038784765,0,0,0,0,0.539617372749944,0.54907405947211,0.235624804691373,0,0,0,0,0,0,0.136499911407986,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.753150406214233,0,0,0,0,0,0.764637207142375,0.569647187174163,0.476463550915578,0.411362273086194,0,0,0,0,0,0,0.371606350251437,0,0.426851060090485,0,0,1.1490322207942,0.846694330895531,0.324621940274555,0.842391534340376,0.684704037099577,0,2.50634477090067,0,0.1605880751037,0,0,0.687010689511529,0,0,0,0,0,0,0,0,0,0,0,0,0.334330152832435,0,0.23874448473769,0,0,0,0.562677665642051,0.222617410045812,0.494411622680279,0.63337622438398,0.597743964753209,0.552567831062295,0,0,0,0,0.0898683511473268,0.358042349351218,0,0.197286811273867,0,0,0,0,0,0.7812832832557,0,0,0,0.254253650292766,0,0,0.583209226766509,0.173624994933292,0,0.482385754501632,0,0.663475559587348,0.886642856860642,0.438770794307945,0,0,0.384751292518985,0,0,0,0.108647371922008,0,0,0,0,0,0,0.225595660617181,0,0.167821586975843,0.37950746544837,0.158936578980379,0,0,0,0,0.995261931078505,0.176915129006678,1.22206028986725,0.593042257361244,0.247127877893006,0.313265848516366,0.134802265961354,0.802577647298789,0,0,0,0.242780379534093,0.394584402849391,1.20990716048664,0.30607276163049,0.379119477770928,0.300646838828985,0.103688191397247,0,0,0,0,0,0.277349346026277,0,0,0.174118413160805,0.17472666824203,0.171986032471617,0,0.219267951258557,0,0.290967049465258,0.176512253383001,0,0,0.19871461170299,0,0.391102765469606,0,0.640358984218058,0,0.144090417154106,0.114536596165916,0.514784993585894,0.288109595976299,0,0,0.407712618220842,0.104602846312333,0,0,0,0.684526894459965,0,0,0,0.279282401272254,0.229160424011684,3.58936512288407,0,0,0.223171457441873,0.134366944973453,0,0,0,0,0.0674035438541849,0,0,0,0.27240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| |||
|short_description=p@chr12:116645578..116645582,- | |||
}} |
Revision as of 16:06, 11 January 2014
Short description: | p@chr12:116645578..116645582, - |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | No |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr12:116645578..116645582, - |
Coexpression cluster: | C192_Neutrophils_CD14_Peripheral_Eosinophils_CD8_Natural_CD4 |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
classical monocyte | 1.17e-11 | 42 |
CD14-positive, CD16-negative classical monocyte | 1.17e-11 | 42 |
leukocyte | 9.06e-11 | 136 |
intermediate monocyte | 9.41e-11 | 9 |
CD14-positive, CD16-positive monocyte | 9.41e-11 | 9 |
myeloid leukocyte | 1.45e-10 | 72 |
hematopoietic stem cell | 3.43e-10 | 168 |
defensive cell | 5.60e-10 | 48 |
phagocyte | 5.60e-10 | 48 |
myeloid cell | 6.30e-10 | 108 |
common myeloid progenitor | 6.30e-10 | 108 |
hematopoietic cell | 1.88e-09 | 177 |
macrophage dendritic cell progenitor | 6.24e-09 | 61 |
neutrophil | 6.42e-09 | 3 |
hematopoietic oligopotent progenitor cell | 1.69e-08 | 161 |
hematopoietic multipotent progenitor cell | 1.69e-08 | 161 |
single nucleate cell | 2.33e-08 | 3 |
mononuclear cell | 2.33e-08 | 3 |
granulocyte monocyte progenitor cell | 5.77e-08 | 67 |
nongranular leukocyte | 1.01e-07 | 115 |
monopoietic cell | 1.25e-07 | 59 |
monocyte | 1.25e-07 | 59 |
monoblast | 1.25e-07 | 59 |
promonocyte | 1.25e-07 | 59 |
granulocyte | 3.06e-07 | 8 |
Ontology term | p-value | n |
---|---|---|
tricuspid valve | 2.66e-07 | 1 |
right atrium valve | 2.66e-07 | 1 |
outflow tract of atrium | 2.66e-07 | 1 |
outflow part of right atrium | 2.66e-07 | 1 |
right cardiac atrium | 2.66e-07 | 1 |
seminal vesicle | 3.17e-07 | 1 |
seminal fluid secreting gland | 3.17e-07 | 1 |
hematopoietic system | 5.48e-07 | 98 |
blood island | 5.48e-07 | 98 |
cranial nerve II | 7.15e-07 | 1 |
cranial nerve | 7.15e-07 | 1 |
nerve trunk | 7.15e-07 | 1 |
nerve connecting eye with brain | 7.15e-07 | 1 |
nerve | 7.15e-07 | 1 |
retinal neural layer | 7.15e-07 | 1 |
presumptive neural retina | 7.15e-07 | 1 |
bone marrow | 8.41e-07 | 76 |