FFCP PHASE1:Hg19::chr12:104850771..104850791,+: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=50515 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=17422 | |||
|TSSclassifier=strong | |||
|UniProt=F8VRG6,Q9NPF2 | |||
|association_with_transcript=0bp_to_ENST00000546689,uc001tkx.1_5end | |||
|description=CAGE_peak_2_at_CHST11_5end | |||
|id=chr12:104850771..104850791,+ | |||
|ontology_enrichment_celltype=CL:0000037!1.70e-46!172;CL:0000566!1.70e-46!172;CL:0000763!8.07e-45!112;CL:0000049!8.07e-45!112;CL:0002032!3.30e-43!165;CL:0000837!3.30e-43!165;CL:0000988!7.32e-42!182;CL:0000738!4.20e-35!140;CL:0000766!1.03e-33!76;CL:0000557!2.37e-29!71;CL:0000839!6.98e-29!70;CL:0002031!1.41e-27!124;CL:0002194!1.51e-25!63;CL:0000576!1.51e-25!63;CL:0000040!1.51e-25!63;CL:0000559!1.51e-25!63;CL:0002009!1.79e-25!65;CL:0002087!6.56e-25!119;CL:0002057!6.39e-22!42;CL:0000860!4.81e-18!45;CL:0000134!6.97e-07!358 | |||
|ontology_enrichment_celltype_v019=CL:0000473;1.46e-17;39!CL:0000234;1.46e-17;39!CL:0000860;4.87e-17;33!CL:0002057;4.87e-17;33!CL:0000766;6.76e-17;69!CL:0000576;4.47e-16;48!CL:0000763;1.78e-14;100!CL:0000738;8.17e-10;136!CL:0000988;3.41e-08;177!CL:0002087;7.20e-08;104 | |||
|ontology_enrichment_celltype_v019_2=CL:0000037,2.57e-51,168;CL:0000763,6.39e-51,108;CL:0000049,6.39e-51,108;CL:0002032,6.91e-48,161;CL:0000837,6.91e-48,161;CL:0000988,2.95e-46,177;CL:0000766,5.05e-40,72;CL:0000738,1.61e-39,136;CL:0000557,2.52e-35,67;CL:0000839,7.64e-35,66;CL:0002031,9.90e-32,120;CL:0002194,2.11e-31,59;CL:0000576,2.11e-31,59;CL:0000040,2.11e-31,59;CL:0000559,2.11e-31,59;CL:0002009,3.38e-31,61;CL:0002087,1.02e-28,115;CL:0000473,4.24e-26,48;CL:0000234,4.24e-26,48;CL:0000860,2.63e-22,42;CL:0002057,2.63e-22,42;CL:0000134,2.04e-07,354 | |||
|ontology_enrichment_development_v019=CL:0002057;2.29e-16;42!CL:0000049;5.27e-14;108 | |||
|ontology_enrichment_disease=DOID:8692!2.30e-10!31;DOID:1240!9.92e-10!39;DOID:2531!7.58e-09!51;DOID:0060083!7.58e-09!51 | |||
|ontology_enrichment_disease_v019=DOID:8692;4.01e-10;31!DOID:1240;1.25e-07;39 | |||
|ontology_enrichment_disease_v019_2=DOID:8692,1.57e-10,31;DOID:1240,7.02e-10,39;DOID:2531,6.89e-09,51;DOID:0060083,6.89e-09,51 | |||
|ontology_enrichment_uberon=UBERON:0002390!6.37e-30!102;UBERON:0003061!6.37e-30!102;UBERON:0002193!8.25e-26!112;UBERON:0002371!7.37e-25!80;UBERON:0001474!2.23e-21!86;UBERON:0004765!1.13e-16!101;UBERON:0001434!1.13e-16!101;UBERON:0002405!6.97e-16!115;UBERON:0003081!1.52e-09!216 | |||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002390,6.37e-35,98;UBERON:0003061,6.37e-35,98;UBERON:0002193,5.39e-30,108;UBERON:0002371,6.09e-30,76;UBERON:0002405,3.93e-26,93;UBERON:0001474,1.76e-25,82;UBERON:0004765,6.61e-22,90;UBERON:0001434,5.93e-18,100;UBERON:0003081,6.37e-11,203 | |||
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| |||
|short_description=p2@CHST11 | |||
}} |
Revision as of 15:36, 11 January 2014
Short description: | p2@CHST11 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_2_at_CHST11_5end |
Coexpression cluster: | NA |
Association with transcript: | 0bp_to_ENST00000546689, uc001tkx.1_5end |
EntrezGene: | CHST11 |
HGNC: | 17422 |
UniProt: | F8VRG6Q9NPF2 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
hematopoietic stem cell | 2.57e-51 | 168 |
myeloid cell | 6.39e-51 | 108 |
common myeloid progenitor | 6.39e-51 | 108 |
hematopoietic oligopotent progenitor cell | 6.91e-48 | 161 |
hematopoietic multipotent progenitor cell | 6.91e-48 | 161 |
hematopoietic cell | 2.95e-46 | 177 |
myeloid leukocyte | 5.05e-40 | 72 |
leukocyte | 1.61e-39 | 136 |
granulocyte monocyte progenitor cell | 2.52e-35 | 67 |
myeloid lineage restricted progenitor cell | 7.64e-35 | 66 |
hematopoietic lineage restricted progenitor cell | 9.90e-32 | 120 |
monopoietic cell | 2.11e-31 | 59 |
monocyte | 2.11e-31 | 59 |
monoblast | 2.11e-31 | 59 |
promonocyte | 2.11e-31 | 59 |
macrophage dendritic cell progenitor | 3.38e-31 | 61 |
nongranular leukocyte | 1.02e-28 | 115 |
defensive cell | 4.24e-26 | 48 |
phagocyte | 4.24e-26 | 48 |
classical monocyte | 2.63e-22 | 42 |
CD14-positive, CD16-negative classical monocyte | 2.63e-22 | 42 |
mesenchymal cell | 2.04e-07 | 354 |
Ontology term | p-value | n |
---|---|---|
hematopoietic system | 6.37e-35 | 98 |
blood island | 6.37e-35 | 98 |
hemolymphoid system | 5.39e-30 | 108 |
bone marrow | 6.09e-30 | 76 |
immune system | 3.93e-26 | 93 |
bone element | 1.76e-25 | 82 |
skeletal element | 6.61e-22 | 90 |
skeletal system | 5.93e-18 | 100 |
lateral plate mesoderm | 6.37e-11 | 203 |
Ontology term | p-value | n |
---|---|---|
myeloid leukemia | 1.57e-10 | 31 |
leukemia | 7.02e-10 | 39 |
hematologic cancer | 6.89e-09 | 51 |
immune system cancer | 6.89e-09 | 51 |